RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 ITGB3P05106 788 aa13.81□□□□□ -0.2
PTCH1-221ENST00000550914 PCSK1P29120 753 aa13.81□□□□□ -0.2
PTCH1-221ENST00000550914 RAP1GAPP47736 663 aa13.81□□□□□ -0.2
PTCH1-221ENST00000550914 LHX1P48742 406 aa13.81□□□□□ -0.2
PTCH1-221ENST00000550914 LIMK1P53667 647 aa13.81□□□□□ -0.2
PTCH1-221ENST00000550914 WNT7BP56706 349 aa13.81□□□□□ -0.2
PTCH1-221ENST00000550914 FAM160A1Q05DH4 1040 aa13.81□□□□□ -0.2
PTCH1-221ENST00000550914 KCNA1Q09470 495 aa13.81□□□□□ -0.2
PTCH1-221ENST00000550914 CUL4AQ13619 759 aa13.81□□□□□ -0.2
PTCH1-221ENST00000550914 TXNDC8Q6A555 127 aa13.81□□□□□ -0.2
PTCH1-221ENST00000550914 CCDC73Q6ZRK6 1079 aa13.81□□□□□ -0.2
PTCH1-221ENST00000550914 CACNA2D4Q7Z3S7 1137 aa13.81□□□□□ -0.2
PTCH1-221ENST00000550914 CAMKK1Q8N5S9 505 aa13.81□□□□□ -0.2
PTCH1-221ENST00000550914 TOP6BLQ8N6T0 577 aa13.81□□□□□ -0.2
PTCH1-221ENST00000550914 CXorf38Q8TB03 319 aa13.81□□□□□ -0.2
PTCH1-221ENST00000550914 CHFRQ96EP1 664 aa13.81□□□□□ -0.2
PTCH1-221ENST00000550914 CEP295NLQ96MC4 621 aa13.81□□□□□ -0.2
PTCH1-221ENST00000550914 CNTNAP3BQ96NU0 1288 aa13.81□□□□□ -0.2
PTCH1-221ENST00000550914 CNTNAP3Q9BZ76 1288 aa13.81□□□□□ -0.2
PTCH1-221ENST00000550914 EBF3Q9H4W6 596 aa13.81□□□□□ -0.2
PTCH1-221ENST00000550914 DDX43Q9NXZ2 648 aaKnown RBP13.81□□□□□ -0.2
PTCH1-221ENST00000550914 SLC8A2Q9UPR5 921 aa13.81□□□□□ -0.2
PTCH1-221ENST00000550914 CLIC4Q9Y696 253 aa13.81□□□□□ -0.2
PTCH1-221ENST00000550914 VPS37CA5D8V6 355 aaPredicted RBP13.8□□□□□ -0.2
PTCH1-221ENST00000550914 OTOL1A6NHN0 477 aaPredicted RBP13.8□□□□□ -0.2
PTCH1-221ENST00000550914 GABRDO14764 452 aa13.8□□□□□ -0.2
PTCH1-221ENST00000550914 RPP40O75818 363 aaKnown RBP13.8□□□□□ -0.2
PTCH1-221ENST00000550914 EPN2O95208 641 aa13.8□□□□□ -0.2
PTCH1-221ENST00000550914 ZNF806P0C7X5 589 aa13.8□□□□□ -0.2
PTCH1-221ENST00000550914 CYP2F1P24903 491 aa13.8□□□□□ -0.2
PTCH1-221ENST00000550914 MAGEA11P43364 429 aa13.8□□□□□ -0.2
PTCH1-221ENST00000550914 CDR1P51861 262 aa13.8□□□□□ -0.2
PTCH1-221ENST00000550914 RBP5P82980 135 aa13.8□□□□□ -0.2
PTCH1-221ENST00000550914 C1QBPQ07021 282 aaKnown RBP13.8□□□□□ -0.2
PTCH1-221ENST00000550914 PPM1JQ5JR12 505 aa13.8□□□□□ -0.2
PTCH1-221ENST00000550914 TRIM68Q6AZZ1 485 aa13.8□□□□□ -0.2
PTCH1-221ENST00000550914 PKN3Q6P5Z2 889 aa13.8□□□□□ -0.2
PTCH1-221ENST00000550914 DPH6Q7L8W6 267 aa13.8□□□□□ -0.2
PTCH1-221ENST00000550914 SYCP3Q8IZU3 236 aa13.8□□□□□ -0.2
PTCH1-221ENST00000550914 CPA6Q8N4T0 437 aa13.8□□□□□ -0.2
PTCH1-221ENST00000550914 CSGALNACT2Q8N6G5 542 aa13.8□□□□□ -0.2
PTCH1-221ENST00000550914 SAAL1Q96ER3 474 aa13.8□□□□□ -0.2
PTCH1-221ENST00000550914 ZC3H10Q96K80 434 aaKnown RBP13.8□□□□□ -0.2
PTCH1-221ENST00000550914 MAGED2Q9UNF1 606 aaPredicted RBP13.8□□□□□ -0.2
PTCH1-221ENST00000550914 PCDHGA5Q9Y5G8 931 aa13.8□□□□□ -0.2
PTCH1-221ENST00000550914 NUP205Q92621 2012 aa13.8□□□□□ -0.2
PTCH1-221ENST00000550914 RNF40O75150 1001 aa13.79□□□□□ -0.2
PTCH1-221ENST00000550914 TADA3O75528 432 aa13.79□□□□□ -0.2
PTCH1-221ENST00000550914 USP17L7P0C7H9 530 aa13.79□□□□□ -0.2
PTCH1-221ENST00000550914 TCF3P15923 654 aa13.79□□□□□ -0.2
PTCH1-221ENST00000550914 PFKLP17858 780 aa13.79□□□□□ -0.2
PTCH1-221ENST00000550914 GPR15P49685 360 aa13.79□□□□□ -0.2
PTCH1-221ENST00000550914 CASP5P51878 434 aa13.79□□□□□ -0.2
PTCH1-221ENST00000550914 MYO1EQ12965 1108 aa13.79□□□□□ -0.2
PTCH1-221ENST00000550914 USP4Q13107 963 aa13.79□□□□□ -0.2
PTCH1-221ENST00000550914 MTF1Q14872 753 aa13.79□□□□□ -0.2
PTCH1-221ENST00000550914 ZNF77Q15935 545 aa13.79□□□□□ -0.2
PTCH1-221ENST00000550914 DDR2Q16832 855 aa13.79□□□□□ -0.2
PTCH1-221ENST00000550914 LIMS2Q7Z4I7 341 aa13.79□□□□□ -0.2
PTCH1-221ENST00000550914 ADGRF2Q8IZF7 708 aa13.79□□□□□ -0.2
PTCH1-221ENST00000550914 FSIP1Q8NA03 581 aa13.79□□□□□ -0.2
PTCH1-221ENST00000550914 ZSWIM2Q8NEG5 633 aa13.79□□□□□ -0.2
PTCH1-221ENST00000550914 CCDC26Q8TAB7 109 aa13.79□□□□□ -0.2
PTCH1-221ENST00000550914 RIN3Q8TB24 985 aa13.79□□□□□ -0.2
PTCH1-221ENST00000550914 OSCP1Q8WVF1 389 aa13.79□□□□□ -0.2
PTCH1-221ENST00000550914 ATP2A3Q93084 1043 aa13.79□□□□□ -0.2
PTCH1-221ENST00000550914 P2RY13Q9BPV8 354 aa13.79□□□□□ -0.2
PTCH1-221ENST00000550914 ECT2Q9H8V3 914 aa13.79□□□□□ -0.2
PTCH1-221ENST00000550914 TBC1D7Q9P0N9 293 aa13.79□□□□□ -0.2
PTCH1-221ENST00000550914 SIX4Q9UIU6 781 aa13.79□□□□□ -0.2
PTCH1-221ENST00000550914 GTF3C4Q9UKN8 822 aa13.79□□□□□ -0.2
PTCH1-221ENST00000550914 SNX9Q9Y5X1 595 aa13.79□□□□□ -0.2
PTCH1-221ENST00000550914 ABCA7Q8IZY2 2146 aa13.78□□□□□ -0.2
PTCH1-221ENST00000550914 TRAV19A0A0A6YYK7 116 aa13.78□□□□□ -0.2
PTCH1-221ENST00000550914 GDF9O60383 454 aa13.78□□□□□ -0.2
PTCH1-221ENST00000550914 EGFP01133 1207 aa13.78□□□□□ -0.2
PTCH1-221ENST00000550914 CKMP06732 381 aa13.78□□□□□ -0.2
PTCH1-221ENST00000550914 TMEM191BP0C7N4 346 aa13.78□□□□□ -0.2
PTCH1-221ENST00000550914 CCDC192P0DO97 292 aa13.78□□□□□ -0.2
PTCH1-221ENST00000550914 IDEP14735 1019 aa13.78□□□□□ -0.2
PTCH1-221ENST00000550914 ARSAP15289 507 aa13.78□□□□□ -0.2
PTCH1-221ENST00000550914 GJA4P35212 333 aa13.78□□□□□ -0.2
PTCH1-221ENST00000550914 STAT6P42226 847 aa13.78□□□□□ -0.2
PTCH1-221ENST00000550914 PDE6CP51160 858 aa13.78□□□□□ -0.2
PTCH1-221ENST00000550914 GALK1P51570 392 aa13.78□□□□□ -0.2
PTCH1-221ENST00000550914 SURF1Q15526 300 aa13.78□□□□□ -0.2
PTCH1-221ENST00000550914 MAPRE1Q15691 268 aaKnown RBP13.78□□□□□ -0.2
PTCH1-221ENST00000550914 SOWAHAQ2M3V2 549 aa13.78□□□□□ -0.2
PTCH1-221ENST00000550914 PLA2G2CQ5R387 149 aa13.78□□□□□ -0.2
PTCH1-221ENST00000550914 SDHAF4Q5VUM1 108 aa13.78□□□□□ -0.2
PTCH1-221ENST00000550914 FAM171BQ6P995 826 aa13.78□□□□□ -0.2
PTCH1-221ENST00000550914 C4orf50Q6ZRC1 276 aa13.78□□□□□ -0.2
PTCH1-221ENST00000550914 STXBP4Q6ZWJ1 553 aa13.78□□□□□ -0.2
PTCH1-221ENST00000550914 SYT13Q7L8C5 426 aa13.78□□□□□ -0.2
PTCH1-221ENST00000550914 SPATA2LQ8IUW3 424 aaPredicted RBP13.78□□□□□ -0.2
PTCH1-221ENST00000550914 GPD1LQ8N335 351 aa13.78□□□□□ -0.2
PTCH1-221ENST00000550914 KIAA1958Q8N8K9 716 aa13.78□□□□□ -0.2
PTCH1-221ENST00000550914 ACDQ96AP0 544 aa13.78□□□□□ -0.2
PTCH1-221ENST00000550914 ANKRD36BP1Q96IX9 119 aa13.78□□□□□ -0.2
PTCH1-221ENST00000550914 SPATA17Q96L03 361 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms