RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 TOP6BLQ8N6T0 577 aa23.3■■□□□ 1.32
SMARCC2-210ENST00000550519 PANK2Q9BZ23 570 aa23.3■■□□□ 1.32
SMARCC2-210ENST00000550519 TMEM206Q9H813 350 aa23.3■■□□□ 1.32
SMARCC2-210ENST00000550519 PDE11AQ9HCR9 933 aa23.3■■□□□ 1.32
SMARCC2-210ENST00000550519 PANK4Q9NVE7 773 aa23.3■■□□□ 1.32
SMARCC2-210ENST00000550519 SNX9Q9Y5X1 595 aa23.3■■□□□ 1.32
SMARCC2-210ENST00000550519 CCDC163A0A0D9SF12 145 aa23.29■■□□□ 1.32
SMARCC2-210ENST00000550519 SLC30A4O14863 429 aa23.29■■□□□ 1.32
SMARCC2-210ENST00000550519 CENPBP07199 599 aaPredicted RBP23.29■■□□□ 1.32
SMARCC2-210ENST00000550519 ARSAP15289 507 aa23.29■■□□□ 1.32
SMARCC2-210ENST00000550519 STAT6P42226 847 aa23.29■■□□□ 1.32
SMARCC2-210ENST00000550519 LHX1P48742 406 aa23.29■■□□□ 1.32
SMARCC2-210ENST00000550519 RBP5P82980 135 aa23.29■■□□□ 1.32
SMARCC2-210ENST00000550519 SLC39A14Q15043 492 aa23.29■■□□□ 1.32
SMARCC2-210ENST00000550519 CCDC142Q17RM4 750 aa23.29■■□□□ 1.32
SMARCC2-210ENST00000550519 CFAP221Q4G0U5 840 aa23.29■■□□□ 1.32
SMARCC2-210ENST00000550519 CEP68Q76N32 757 aa23.29■■□□□ 1.32
SMARCC2-210ENST00000550519 MTMR12Q9C0I1 747 aa23.29■■□□□ 1.32
SMARCC2-210ENST00000550519 PCIF1Q9H4Z3 704 aa23.29■■□□□ 1.32
SMARCC2-210ENST00000550519 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.28■■□□□ 1.32
SMARCC2-210ENST00000550519 PRPF6O94906 941 aaKnown RBP23.28■■□□□ 1.32
SMARCC2-210ENST00000550519 KRT19P08727 400 aa23.28■■□□□ 1.32
SMARCC2-210ENST00000550519 AMPD2Q01433 879 aa23.28■■□□□ 1.32
SMARCC2-210ENST00000550519 PDGFRLQ15198 375 aa23.28■■□□□ 1.32
SMARCC2-210ENST00000550519 SOWAHAQ2M3V2 549 aa23.28■■□□□ 1.32
SMARCC2-210ENST00000550519 CC2D1AQ6P1N0 951 aaPredicted RBP23.28■■□□□ 1.32
SMARCC2-210ENST00000550519 ADGRF2Q8IZF7 708 aa23.28■■□□□ 1.32
SMARCC2-210ENST00000550519 GPD1LQ8N335 351 aa23.28■■□□□ 1.32
SMARCC2-210ENST00000550519 FUBP3Q96I24 572 aaKnown RBP eCLIP23.28■■□□□ 1.32
SMARCC2-210ENST00000550519 USP28Q96RU2 1077 aa23.28■■□□□ 1.32
SMARCC2-210ENST00000550519 EPG5Q9HCE0 2579 aa23.27■■□□□ 1.32
SMARCC2-210ENST00000550519 KIAA0391O15091 583 aaKnown RBP23.27■■□□□ 1.32
SMARCC2-210ENST00000550519 HCRTO43612 131 aa23.27■■□□□ 1.32
SMARCC2-210ENST00000550519 FOXD2O60548 495 aaPredicted RBP23.27■■□□□ 1.32
SMARCC2-210ENST00000550519 ATG13O75143 517 aa23.27■■□□□ 1.32
SMARCC2-210ENST00000550519 TMEM191BP0C7N4 346 aa23.27■■□□□ 1.32
SMARCC2-210ENST00000550519 PCSK1P29120 753 aa23.27■■□□□ 1.32
SMARCC2-210ENST00000550519 FAM160A1Q05DH4 1040 aa23.27■■□□□ 1.32
SMARCC2-210ENST00000550519 FAM171BQ6P995 826 aa23.27■■□□□ 1.32
SMARCC2-210ENST00000550519 DPH6Q7L8W6 267 aa23.27■■□□□ 1.32
SMARCC2-210ENST00000550519 LIMS2Q7Z4I7 341 aa23.27■■□□□ 1.32
SMARCC2-210ENST00000550519 FBRSL1Q9HCM7 1045 aaKnown RBP23.27■■□□□ 1.32
SMARCC2-210ENST00000550519 INTS13Q9NVM9 706 aa23.27■■□□□ 1.32
SMARCC2-210ENST00000550519 DENND4CQ5VZ89 1909 aa23.27■■□□□ 1.32
SMARCC2-210ENST00000550519 EGFP01133 1207 aa23.26■■□□□ 1.31
SMARCC2-210ENST00000550519 PXNP49023 591 aaPredicted RBP23.26■■□□□ 1.31
SMARCC2-210ENST00000550519 GALK1P51570 392 aa23.26■■□□□ 1.31
SMARCC2-210ENST00000550519 MTF1Q14872 753 aa23.26■■□□□ 1.31
SMARCC2-210ENST00000550519 SPATA2LQ8IUW3 424 aaPredicted RBP23.26■■□□□ 1.31
SMARCC2-210ENST00000550519 GAB3Q8WWW8 586 aa23.26■■□□□ 1.31
SMARCC2-210ENST00000550519 SLC22A12Q96S37 553 aa23.26■■□□□ 1.31
SMARCC2-210ENST00000550519 CYP2S1Q96SQ9 504 aa23.26■■□□□ 1.31
SMARCC2-210ENST00000550519 MTMR6Q9Y217 621 aa23.26■■□□□ 1.31
SMARCC2-210ENST00000550519 ACACBO00763 2458 aa23.25■■□□□ 1.31
SMARCC2-210ENST00000550519 GDF9O60383 454 aa23.25■■□□□ 1.31
SMARCC2-210ENST00000550519 RNF40O75150 1001 aa23.25■■□□□ 1.31
SMARCC2-210ENST00000550519 DRD1P21728 446 aa23.25■■□□□ 1.31
SMARCC2-210ENST00000550519 GJA4P35212 333 aa23.25■■□□□ 1.31
SMARCC2-210ENST00000550519 MAGEA11P43364 429 aa23.25■■□□□ 1.31
SMARCC2-210ENST00000550519 MYO1EQ12965 1108 aa23.25■■□□□ 1.31
SMARCC2-210ENST00000550519 ZNF77Q15935 545 aa23.25■■□□□ 1.31
SMARCC2-210ENST00000550519 LMBRD2Q68DH5 695 aaPredicted RBP23.25■■□□□ 1.31
SMARCC2-210ENST00000550519 CCDC65Q8IXS2 484 aa23.25■■□□□ 1.31
SMARCC2-210ENST00000550519 GLIS3Q8NEA6 775 aa23.25■■□□□ 1.31
SMARCC2-210ENST00000550519 OR5B17Q8NGF7 314 aa23.25■■□□□ 1.31
SMARCC2-210ENST00000550519 NOC3LQ8WTT2 800 aaKnown RBP23.25■■□□□ 1.31
SMARCC2-210ENST00000550519 OSCP1Q8WVF1 389 aa23.25■■□□□ 1.31
SMARCC2-210ENST00000550519 KBTBD7Q8WVZ9 684 aa23.25■■□□□ 1.31
SMARCC2-210ENST00000550519 INTS4Q96HW7 963 aaKnown RBP23.25■■□□□ 1.31
SMARCC2-210ENST00000550519 ANKRD36BP1Q96IX9 119 aa23.25■■□□□ 1.31
SMARCC2-210ENST00000550519 LOXL4Q96JB6 756 aa23.25■■□□□ 1.31
SMARCC2-210ENST00000550519 CNTNAP3BQ96NU0 1288 aa23.25■■□□□ 1.31
SMARCC2-210ENST00000550519 CNTNAP3Q9BZ76 1288 aa23.25■■□□□ 1.31
SMARCC2-210ENST00000550519 ECT2Q9H8V3 914 aa23.25■■□□□ 1.31
SMARCC2-210ENST00000550519 SLC8A2Q9UPR5 921 aa23.25■■□□□ 1.31
SMARCC2-210ENST00000550519 PTPRJQ12913 1337 aa23.25■■□□□ 1.31
SMARCC2-210ENST00000550519 TRAV19A0A0A6YYK7 116 aa23.24■■□□□ 1.31
SMARCC2-210ENST00000550519 RPP40O75818 363 aaKnown RBP23.24■■□□□ 1.31
SMARCC2-210ENST00000550519 USP17L7P0C7H9 530 aa23.24■■□□□ 1.31
SMARCC2-210ENST00000550519 USP4Q13107 963 aa23.24■■□□□ 1.31
SMARCC2-210ENST00000550519 FBXO43Q4G163 708 aa23.24■■□□□ 1.31
SMARCC2-210ENST00000550519 NAIF1Q69YI7 327 aaPredicted RBP23.24■■□□□ 1.31
SMARCC2-210ENST00000550519 SCN4BQ8IWT1 228 aa23.24■■□□□ 1.31
SMARCC2-210ENST00000550519 CPA6Q8N4T0 437 aa23.24■■□□□ 1.31
SMARCC2-210ENST00000550519 CAMKK1Q8N5S9 505 aa23.24■■□□□ 1.31
SMARCC2-210ENST00000550519 PDILTQ8N807 584 aa23.24■■□□□ 1.31
SMARCC2-210ENST00000550519 P2RY13Q9BPV8 354 aa23.24■■□□□ 1.31
SMARCC2-210ENST00000550519 TRPC7Q9HCX4 862 aa23.24■■□□□ 1.31
SMARCC2-210ENST00000550519 GCNT4Q9P109 453 aa23.24■■□□□ 1.31
SMARCC2-210ENST00000550519 OBSL1O75147 1896 aa23.24■■□□□ 1.31
SMARCC2-210ENST00000550519 SDK1Q7Z5N4 2213 aa23.23■■□□□ 1.31
SMARCC2-210ENST00000550519 ZNF233A6NK53 670 aa23.23■■□□□ 1.31
SMARCC2-210ENST00000550519 ATP2C2O75185 946 aa23.23■■□□□ 1.31
SMARCC2-210ENST00000550519 CKMP06732 381 aa23.23■■□□□ 1.31
SMARCC2-210ENST00000550519 ADRB1P08588 477 aa23.23■■□□□ 1.31
SMARCC2-210ENST00000550519 LMO2P25791 158 aa23.23■■□□□ 1.31
SMARCC2-210ENST00000550519 RAP1GAPP47736 663 aa23.23■■□□□ 1.31
SMARCC2-210ENST00000550519 NASPP49321 788 aaPredicted RBP23.23■■□□□ 1.31
SMARCC2-210ENST00000550519 SURF1Q15526 300 aa23.23■■□□□ 1.31
SMARCC2-210ENST00000550519 C4orf50Q6ZRC1 276 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms