RNA–Protein interactions for RNA: ENST00000550267.1

VPS29-208, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 810 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-208ENST00000550267 DDX19AQ9NUU7 478 aaKnown RBP11.39□□□□□ -0.59
VPS29-208ENST00000550267 BAHCC1Q9P281 2608 aa11.39□□□□□ -0.59
VPS29-208ENST00000550267 KIF26AQ9ULI4 1882 aaPredicted RBP11.39□□□□□ -0.59
VPS29-208ENST00000550267 INVSQ9Y283 1065 aa11.39□□□□□ -0.59
VPS29-208ENST00000550267 SPEGQ15772 3267 aa11.38□□□□□ -0.59
VPS29-208ENST00000550267 ASPMQ8IZT6 3477 aa11.38□□□□□ -0.59
VPS29-208ENST00000550267 CACNA1GO43497 2377 aa11.38□□□□□ -0.59
VPS29-208ENST00000550267 TMEM8BA6NDV4 472 aa11.38□□□□□ -0.59
VPS29-208ENST00000550267 SFI1A8K8P3 1242 aa11.38□□□□□ -0.59
VPS29-208ENST00000550267 E9PMD0 336 aa11.38□□□□□ -0.59
VPS29-208ENST00000550267 PPEF2O14830 753 aa11.38□□□□□ -0.59
VPS29-208ENST00000550267 SLC16A4O15374 487 aa11.38□□□□□ -0.59
VPS29-208ENST00000550267 TOM1L1O75674 476 aa11.38□□□□□ -0.59
VPS29-208ENST00000550267 ARSAP15289 507 aa11.38□□□□□ -0.59
VPS29-208ENST00000550267 ATF6P18850 670 aa11.38□□□□□ -0.59
VPS29-208ENST00000550267 CDC25CP30307 473 aa11.38□□□□□ -0.59
VPS29-208ENST00000550267 GALK1P51570 392 aa11.38□□□□□ -0.59
VPS29-208ENST00000550267 GUCY1B3Q02153 619 aa11.38□□□□□ -0.59
VPS29-208ENST00000550267 MAPK7Q13164 816 aa11.38□□□□□ -0.59
VPS29-208ENST00000550267 MYBPC2Q14324 1141 aa11.38□□□□□ -0.59
VPS29-208ENST00000550267 KARSQ15046 597 aaKnown RBP11.38□□□□□ -0.59
VPS29-208ENST00000550267 ZBTB6Q15916 424 aa11.38□□□□□ -0.59
VPS29-208ENST00000550267 ARMCX5Q6P1M9 558 aa11.38□□□□□ -0.59
VPS29-208ENST00000550267 RPLP0P6Q8NHW5 317 aa11.38□□□□□ -0.59
VPS29-208ENST00000550267 GIPC2Q8TF65 315 aa11.38□□□□□ -0.59
VPS29-208ENST00000550267 ZCCHC14Q8WYQ9 949 aaKnown RBP11.38□□□□□ -0.59
VPS29-208ENST00000550267 GCNAQ96QF7 691 aa11.38□□□□□ -0.59
VPS29-208ENST00000550267 RUSC1Q9BVN2 902 aa11.38□□□□□ -0.59
VPS29-208ENST00000550267 CCL26Q9Y258 94 aa11.38□□□□□ -0.59
VPS29-208ENST00000550267 RBM19Q9Y4C8 960 aaKnown RBP11.38□□□□□ -0.59
VPS29-208ENST00000550267 TTC26A0AVF1 554 aa11.37□□□□□ -0.59
VPS29-208ENST00000550267 TTLL8A6PVC2 850 aa11.37□□□□□ -0.59
VPS29-208ENST00000550267 PATE3B3GLJ2 98 aa11.37□□□□□ -0.59
VPS29-208ENST00000550267 KHNYNO15037 678 aaKnown RBP11.37□□□□□ -0.59
VPS29-208ENST00000550267 APBB3O95704 486 aa11.37□□□□□ -0.59
VPS29-208ENST00000550267 CEACAM1P13688 526 aa11.37□□□□□ -0.59
VPS29-208ENST00000550267 TYMPP19971 482 aa11.37□□□□□ -0.59
VPS29-208ENST00000550267 DRD1P21728 446 aa11.37□□□□□ -0.59
VPS29-208ENST00000550267 GBP1P32455 592 aa11.37□□□□□ -0.59
VPS29-208ENST00000550267 DGKEP52429 567 aa11.37□□□□□ -0.59
VPS29-208ENST00000550267 RING1Q06587 406 aa11.37□□□□□ -0.59
VPS29-208ENST00000550267 STRN3Q13033 797 aa11.37□□□□□ -0.59
VPS29-208ENST00000550267 DMC1Q14565 340 aa11.37□□□□□ -0.59
VPS29-208ENST00000550267 VEPH1Q14D04 833 aa11.37□□□□□ -0.59
VPS29-208ENST00000550267 ME3Q16798 604 aa11.37□□□□□ -0.59
VPS29-208ENST00000550267 MGAT5BQ3V5L5 792 aa11.37□□□□□ -0.59
VPS29-208ENST00000550267 KIAA1211LQ6NV74 962 aa11.37□□□□□ -0.59
VPS29-208ENST00000550267 LRSAM1Q6UWE0 723 aa11.37□□□□□ -0.59
VPS29-208ENST00000550267 CMTM8Q8IZV2 173 aa11.37□□□□□ -0.59
VPS29-208ENST00000550267 DEFB124Q8NES8 71 aa11.37□□□□□ -0.59
VPS29-208ENST00000550267 OR10T2Q8NGX3 314 aa11.37□□□□□ -0.59
VPS29-208ENST00000550267 RIN3Q8TB24 985 aa11.37□□□□□ -0.59
VPS29-208ENST00000550267 SNX29Q8TEQ0 813 aa11.37□□□□□ -0.59
VPS29-208ENST00000550267 GTF3C6Q969F1 213 aa11.37□□□□□ -0.59
VPS29-208ENST00000550267 DRC1Q96MC2 740 aa11.37□□□□□ -0.59
VPS29-208ENST00000550267 P2RY13Q9BPV8 354 aa11.37□□□□□ -0.59
VPS29-208ENST00000550267 HAPLN2Q9GZV7 340 aa11.37□□□□□ -0.59
VPS29-208ENST00000550267 PLEKHA5Q9HAU0 1116 aa11.37□□□□□ -0.59
VPS29-208ENST00000550267 TMEM9BQ9NQ34 198 aa11.37□□□□□ -0.59
VPS29-208ENST00000550267 LRWD1Q9UFC0 647 aa11.37□□□□□ -0.59
VPS29-208ENST00000550267 UBQLN1Q9UMX0 589 aaKnown RBP11.37□□□□□ -0.59
VPS29-208ENST00000550267 EML5Q05BV3 1969 aa11.37□□□□□ -0.59
VPS29-208ENST00000550267 CDX4O14627 284 aaPredicted RBP11.36□□□□□ -0.59
VPS29-208ENST00000550267 CLDN3O15551 220 aa11.36□□□□□ -0.59
VPS29-208ENST00000550267 ODC1P11926 461 aa11.36□□□□□ -0.59
VPS29-208ENST00000550267 CYP3A5P20815 502 aa11.36□□□□□ -0.59
VPS29-208ENST00000550267 CSRP1P21291 193 aaKnown RBP11.36□□□□□ -0.59
VPS29-208ENST00000550267 NMT1P30419 496 aaKnown RBP11.36□□□□□ -0.59
VPS29-208ENST00000550267 TNFSF9P41273 254 aa11.36□□□□□ -0.59
VPS29-208ENST00000550267 MATR3P43243 847 aaKnown RBP eCLIP11.36□□□□□ -0.59
VPS29-208ENST00000550267 TUFMP49411 452 aaKnown RBP11.36□□□□□ -0.59
VPS29-208ENST00000550267 GSK3AP49840 483 aa11.36□□□□□ -0.59
VPS29-208ENST00000550267 AMPD2Q01433 879 aa11.36□□□□□ -0.59
VPS29-208ENST00000550267 MCL1Q07820 350 aa11.36□□□□□ -0.59
VPS29-208ENST00000550267 BFSP1Q12934 665 aa11.36□□□□□ -0.59
VPS29-208ENST00000550267 TAF12Q16514 161 aa11.36□□□□□ -0.59
VPS29-208ENST00000550267 UAP1L1Q3KQV9 507 aa11.36□□□□□ -0.59
VPS29-208ENST00000550267 SLC39A12Q504Y0 691 aa11.36□□□□□ -0.59
VPS29-208ENST00000550267 PMS2CLQ68D20 193 aa11.36□□□□□ -0.59
VPS29-208ENST00000550267 RINT1Q6NUQ1 792 aa11.36□□□□□ -0.59
VPS29-208ENST00000550267 SYT13Q7L8C5 426 aa11.36□□□□□ -0.59
VPS29-208ENST00000550267 MAB21L3Q8N8X9 362 aa11.36□□□□□ -0.59
VPS29-208ENST00000550267 EZH1Q92800 747 aaPredicted RBP11.36□□□□□ -0.59
VPS29-208ENST00000550267 USP13Q92995 863 aaPredicted RBP11.36□□□□□ -0.59
VPS29-208ENST00000550267 SENP8Q96LD8 212 aa11.36□□□□□ -0.59
VPS29-208ENST00000550267 TPSD1Q9BZJ3 242 aa11.36□□□□□ -0.59
VPS29-208ENST00000550267 HSFX1Q9UBD0 423 aa11.36□□□□□ -0.59
VPS29-208ENST00000550267 EBF1Q9UH73 591 aa11.36□□□□□ -0.59
VPS29-208ENST00000550267 LACTBL1A8MY62 500 aa11.35□□□□□ -0.59
VPS29-208ENST00000550267 HYAL3O43820 417 aaPredicted RBP11.35□□□□□ -0.59
VPS29-208ENST00000550267 CLTAP09496 248 aa11.35□□□□□ -0.59
VPS29-208ENST00000550267 BCKDHBP21953 392 aa11.35□□□□□ -0.59
VPS29-208ENST00000550267 GJA4P35212 333 aa11.35□□□□□ -0.59
VPS29-208ENST00000550267 AVPR1AP37288 418 aa11.35□□□□□ -0.59
VPS29-208ENST00000550267 LILRA4P59901 499 aa11.35□□□□□ -0.59
VPS29-208ENST00000550267 IRX4P78413 519 aa11.35□□□□□ -0.59
VPS29-208ENST00000550267 PPP2R3AQ06190 1150 aa11.35□□□□□ -0.59
VPS29-208ENST00000550267 RAD51AP2Q09MP3 1159 aa11.35□□□□□ -0.59
VPS29-208ENST00000550267 PSMD2Q13200 908 aa11.35□□□□□ -0.59
VPS29-208ENST00000550267 ORC2Q13416 577 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms