RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 KCNK12Q9HB15 430 aa27.66■■■□□ 2.02
CPSF6-205ENST00000550075 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.66■■■□□ 2.023e-8■■■■■ 52.8
CPSF6-205ENST00000550075 COQ4Q9Y3A0 265 aa27.66■■■□□ 2.02
CPSF6-205ENST00000550075 PTPRDP23468 1912 aa27.65■■■□□ 2.02
CPSF6-205ENST00000550075 MYO10Q9HD67 2058 aa27.65■■■□□ 2.02
CPSF6-205ENST00000550075 FMO5P49326 533 aa27.65■■■□□ 2.02
CPSF6-205ENST00000550075 DPCR1Q3MIW9 517 aa27.65■■■□□ 2.02
CPSF6-205ENST00000550075 CT47A1Q5JQC4 288 aaPredicted RBP27.65■■■□□ 2.02
CPSF6-205ENST00000550075 TMC8Q8IU68 726 aa27.65■■■□□ 2.02
CPSF6-205ENST00000550075 SCN4BQ8IWT1 228 aa27.65■■■□□ 2.02
CPSF6-205ENST00000550075 GIPC2Q8TF65 315 aa27.65■■■□□ 2.02
CPSF6-205ENST00000550075 EDAQ92838 391 aa27.65■■■□□ 2.02
CPSF6-205ENST00000550075 TCEAL4Q96EI5 215 aa27.65■■■□□ 2.02
CPSF6-205ENST00000550075 DPEP3Q9H4B8 488 aa27.65■■■□□ 2.02
CPSF6-205ENST00000550075 FAM124BQ9H5Z6 455 aaPredicted RBP27.65■■■□□ 2.02
CPSF6-205ENST00000550075 APOBEC3GQ9HC16 384 aaKnown RBP27.65■■■□□ 2.02
CPSF6-205ENST00000550075 NME7Q9Y5B8 376 aa27.65■■■□□ 2.02
CPSF6-205ENST00000550075 P4HA2O15460 535 aa27.64■■■□□ 2.02
CPSF6-205ENST00000550075 ANXA13P27216 316 aa27.64■■■□□ 2.02
CPSF6-205ENST00000550075 ERCC5P28715 1186 aaPredicted RBP27.64■■■□□ 2.02
CPSF6-205ENST00000550075 CDC25CP30307 473 aa27.64■■■□□ 2.02
CPSF6-205ENST00000550075 ZXDAP98168 799 aa27.64■■■□□ 2.02
CPSF6-205ENST00000550075 INCA1Q0VD86 236 aa27.64■■■□□ 2.02
CPSF6-205ENST00000550075 TDGQ13569 410 aa27.64■■■□□ 2.02
CPSF6-205ENST00000550075 HTR4Q13639 388 aa27.64■■■□□ 2.02
CPSF6-205ENST00000550075 TRIM59Q8IWR1 403 aa27.64■■■□□ 2.02
CPSF6-205ENST00000550075 SEMA4DQ92854 862 aa27.64■■■□□ 2.02
CPSF6-205ENST00000550075 CEP295NLQ96MC4 621 aa27.64■■■□□ 2.02
CPSF6-205ENST00000550075 LRRC3Q9BY71 257 aa27.64■■■□□ 2.02
CPSF6-205ENST00000550075 GPR88Q9GZN0 384 aa27.64■■■□□ 2.02
CPSF6-205ENST00000550075 UTP18Q9Y5J1 556 aaKnown RBP eCLIP27.64■■■□□ 2.02
CPSF6-205ENST00000550075 TRIM66O15016 1216 aa27.63■■■□□ 2.01
CPSF6-205ENST00000550075 PMM2O15305 246 aa27.63■■■□□ 2.01
CPSF6-205ENST00000550075 BDNFP23560 247 aa27.63■■■□□ 2.01
CPSF6-205ENST00000550075 CCR2P41597 374 aa27.63■■■□□ 2.01
CPSF6-205ENST00000550075 NDST1P52848 882 aa27.63■■■□□ 2.01
CPSF6-205ENST00000550075 DDR2Q16832 855 aa27.63■■■□□ 2.01
CPSF6-205ENST00000550075 ARHGAP15Q53QZ3 475 aa27.63■■■□□ 2.01
CPSF6-205ENST00000550075 CCDC183Q5T5S1 534 aa27.63■■■□□ 2.01
CPSF6-205ENST00000550075 RBM43Q6ZSC3 357 aaKnown RBP27.63■■■□□ 2.01
CPSF6-205ENST00000550075 MCRS1Q96EZ8 462 aa27.63■■■□□ 2.01
CPSF6-205ENST00000550075 CNOT6LQ96LI5 555 aaKnown RBP27.63■■■□□ 2.01
CPSF6-205ENST00000550075 SLITRK6Q9H5Y7 841 aa27.63■■■□□ 2.01
CPSF6-205ENST00000550075 UXTQ9UBK9 157 aaPredicted RBP27.63■■■□□ 2.01
CPSF6-205ENST00000550075 ANHXE9PGG2 379 aa27.62■■■□□ 2.01
CPSF6-205ENST00000550075 GABRR2P28476 465 aa27.62■■■□□ 2.01
CPSF6-205ENST00000550075 GRIK1P39086 918 aa27.62■■■□□ 2.01
CPSF6-205ENST00000550075 FAM114A1Q8IWE2 563 aa27.62■■■□□ 2.01
CPSF6-205ENST00000550075 SHKBP1Q8TBC3 707 aa27.62■■■□□ 2.01
CPSF6-205ENST00000550075 MED10Q9BTT4 135 aa27.62■■■□□ 2.01
CPSF6-205ENST00000550075 NT5C1AQ9BXI3 368 aa27.62■■■□□ 2.01
CPSF6-205ENST00000550075 ZNF334Q9HCZ1 680 aaPredicted RBP27.62■■■□□ 2.01
CPSF6-205ENST00000550075 A0A1W2PRU2 124 aa27.61■■■□□ 2.01
CPSF6-205ENST00000550075 AFPP02771 609 aaKnown RBP27.61■■■□□ 2.01
CPSF6-205ENST00000550075 CD58P19256 250 aa27.61■■■□□ 2.01
CPSF6-205ENST00000550075 GPR15P49685 360 aa27.61■■■□□ 2.01
CPSF6-205ENST00000550075 YWHAEP62258 255 aaKnown RBP27.61■■■□□ 2.01
CPSF6-205ENST00000550075 SASS6Q6UVJ0 657 aa27.61■■■□□ 2.01
CPSF6-205ENST00000550075 ACOT1Q86TX2 421 aa27.61■■■□□ 2.01
CPSF6-205ENST00000550075 GPR152Q8TDT2 470 aa27.61■■■□□ 2.01
CPSF6-205ENST00000550075 SPATA17Q96L03 361 aa27.61■■■□□ 2.01
CPSF6-205ENST00000550075 ATXN3LQ9H3M9 355 aa27.61■■■□□ 2.01
CPSF6-205ENST00000550075 EHD2Q9NZN4 543 aa27.61■■■□□ 2.01
CPSF6-205ENST00000550075 ZMYM5Q9UJ78 669 aa27.61■■■□□ 2.01
CPSF6-205ENST00000550075 NUMBLQ9Y6R0 609 aa27.61■■■□□ 2.01
CPSF6-205ENST00000550075 SIGLEC14Q08ET2 396 aa27.6■■■□□ 2.01
CPSF6-205ENST00000550075 KCNH2Q12809 1159 aa27.6■■■□□ 2.01
CPSF6-205ENST00000550075 TEAD2Q15562 447 aa27.6■■■□□ 2.01
CPSF6-205ENST00000550075 TMEM31Q5JXX7 168 aa27.6■■■□□ 2.01
CPSF6-205ENST00000550075 CRYBG2Q8N1P7 616 aa27.6■■■□□ 2.01
CPSF6-205ENST00000550075 TRMT2BQ96GJ1 504 aaKnown RBP27.6■■■□□ 2.01
CPSF6-205ENST00000550075 THAP9Q9H5L6 903 aa27.6■■■□□ 2.01
CPSF6-205ENST00000550075 HMGXB4Q9UGU5 601 aa27.6■■■□□ 2.01
CPSF6-205ENST00000550075 MAGED2Q9UNF1 606 aaPredicted RBP27.6■■■□□ 2.01
CPSF6-205ENST00000550075 DUSP12Q9UNI6 340 aa27.6■■■□□ 2.01
CPSF6-205ENST00000550075 SLC38A8A6NNN8 435 aa27.59■■■□□ 2.01
CPSF6-205ENST00000550075 CILPO75339 1184 aa27.59■■■□□ 2.01
CPSF6-205ENST00000550075 MOSPD3O75425 235 aa27.59■■■□□ 2.01
CPSF6-205ENST00000550075 NOL4O94818 638 aa27.59■■■□□ 2.01
CPSF6-205ENST00000550075 GJA1P17302 382 aa27.59■■■□□ 2.01
CPSF6-205ENST00000550075 TBXAS1P24557 533 aaPredicted RBP27.59■■■□□ 2.01
CPSF6-205ENST00000550075 SDHAF4Q5VUM1 108 aa27.59■■■□□ 2.01
CPSF6-205ENST00000550075 TRIM67Q6ZTA4 783 aa27.59■■■□□ 2.01
CPSF6-205ENST00000550075 GAREM2Q75VX8 874 aa27.59■■■□□ 2.01
CPSF6-205ENST00000550075 FAM35AQ86V20 835 aa27.59■■■□□ 2.01
CPSF6-205ENST00000550075 RSAD2Q8WXG1 361 aa27.59■■■□□ 2.01
CPSF6-205ENST00000550075 SMARCD1Q96GM5 515 aa27.59■■■□□ 2.01
CPSF6-205ENST00000550075 C8orf48Q96LL4 319 aa27.59■■■□□ 2.01
CPSF6-205ENST00000550075 NT5C1BQ96P26 610 aa27.59■■■□□ 2.01
CPSF6-205ENST00000550075 B3GNT5Q9BYG0 378 aa27.59■■■□□ 2.01
CPSF6-205ENST00000550075 ZNF518BQ9C0D4 1074 aa27.59■■■□□ 2.01
CPSF6-205ENST00000550075 LRRN2O75325 713 aa27.58■■■□□ 2.01
CPSF6-205ENST00000550075 HMGA1P17096 107 aaKnown RBP27.58■■■□□ 2.01
CPSF6-205ENST00000550075 PARM1Q6UWI2 310 aa27.58■■■□□ 2.01
CPSF6-205ENST00000550075 CREBRFQ8IUR6 639 aa27.58■■■□□ 2.01
CPSF6-205ENST00000550075 FGF14Q92915 247 aa27.58■■■□□ 2.01
CPSF6-205ENST00000550075 MED15Q96RN5 788 aa27.58■■■□□ 2.01
CPSF6-205ENST00000550075 ANO10Q9NW15 660 aa27.58■■■□□ 2.01
CPSF6-205ENST00000550075 F8VP50 259 aa27.57■■■□□ 2
CPSF6-205ENST00000550075 GPR37L1O60883 481 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms