RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 MCTP1Q6DN14 999 aa10.61□□□□□ -0.71
TRAFD1-207ENST00000550051 ZNF720Q7Z2F6 126 aa10.61□□□□□ -0.71
TRAFD1-207ENST00000550051 CCDC26Q8TAB7 109 aa10.61□□□□□ -0.71
TRAFD1-207ENST00000550051 LRRC15Q8TF66 581 aa10.61□□□□□ -0.71
TRAFD1-207ENST00000550051 OSCP1Q8WVF1 389 aa10.61□□□□□ -0.71
TRAFD1-207ENST00000550051 TMEM206Q9H813 350 aa10.61□□□□□ -0.71
TRAFD1-207ENST00000550051 ECT2Q9H8V3 914 aa10.61□□□□□ -0.71
TRAFD1-207ENST00000550051 TMLHEQ9NVH6 421 aa10.61□□□□□ -0.71
TRAFD1-207ENST00000550051 UXTQ9UBK9 157 aaPredicted RBP10.61□□□□□ -0.71
TRAFD1-207ENST00000550051 NUP205Q92621 2012 aa10.61□□□□□ -0.71
TRAFD1-207ENST00000550051 CFAP47Q6ZTR5 3102 aa10.61□□□□□ -0.71
TRAFD1-207ENST00000550051 ABCA7Q8IZY2 2146 aa10.6□□□□□ -0.71
TRAFD1-207ENST00000550051 MYO16Q9Y6X6 1858 aa10.6□□□□□ -0.71
TRAFD1-207ENST00000550051 IL18RAPO95256 599 aa10.6□□□□□ -0.71
TRAFD1-207ENST00000550051 APBB3O95704 486 aa10.6□□□□□ -0.71
TRAFD1-207ENST00000550051 CAVIN2O95810 425 aa10.6□□□□□ -0.71
TRAFD1-207ENST00000550051 USP17L7P0C7H9 530 aa10.6□□□□□ -0.71
TRAFD1-207ENST00000550051 TCF3P15923 654 aa10.6□□□□□ -0.71
TRAFD1-207ENST00000550051 ADSSP30520 456 aa10.6□□□□□ -0.71
TRAFD1-207ENST00000550051 CDR1P51861 262 aa10.6□□□□□ -0.71
TRAFD1-207ENST00000550051 TSPY1Q01534 308 aa10.6□□□□□ -0.71
TRAFD1-207ENST00000550051 NR1H3Q13133 447 aa10.6□□□□□ -0.71
TRAFD1-207ENST00000550051 DHX8Q14562 1220 aaKnown RBP10.6□□□□□ -0.71
TRAFD1-207ENST00000550051 DMC1Q14565 340 aa10.6□□□□□ -0.71
TRAFD1-207ENST00000550051 MCM6Q14566 821 aa10.6□□□□□ -0.71
TRAFD1-207ENST00000550051 MTF1Q14872 753 aa10.6□□□□□ -0.71
TRAFD1-207ENST00000550051 ZC2HC1CQ53FD0 456 aaPredicted RBP10.6□□□□□ -0.71
TRAFD1-207ENST00000550051 RNF43Q68DV7 783 aa10.6□□□□□ -0.71
TRAFD1-207ENST00000550051 C11orf74Q86VG3 221 aa10.6□□□□□ -0.71
TRAFD1-207ENST00000550051 EFCAB13Q8IY85 973 aa10.6□□□□□ -0.71
TRAFD1-207ENST00000550051 TMEM86AQ8N2M4 240 aa10.6□□□□□ -0.71
TRAFD1-207ENST00000550051 CPA6Q8N4T0 437 aa10.6□□□□□ -0.71
TRAFD1-207ENST00000550051 KIAA1958Q8N8K9 716 aa10.6□□□□□ -0.71
TRAFD1-207ENST00000550051 RPLP0P6Q8NHW5 317 aa10.6□□□□□ -0.71
TRAFD1-207ENST00000550051 SPATA18Q8TC71 538 aa10.6□□□□□ -0.71
TRAFD1-207ENST00000550051 RAD54LQ92698 747 aa10.6□□□□□ -0.71
TRAFD1-207ENST00000550051 EZH1Q92800 747 aaPredicted RBP10.6□□□□□ -0.71
TRAFD1-207ENST00000550051 CD101Q93033 1021 aa10.6□□□□□ -0.71
TRAFD1-207ENST00000550051 ATP2A3Q93084 1043 aa10.6□□□□□ -0.71
TRAFD1-207ENST00000550051 HVCN1Q96D96 273 aa10.6□□□□□ -0.71
TRAFD1-207ENST00000550051 CYP2S1Q96SQ9 504 aa10.6□□□□□ -0.71
TRAFD1-207ENST00000550051 PKMYT1Q99640 499 aa10.6□□□□□ -0.71
TRAFD1-207ENST00000550051 PI4K2AQ9BTU6 479 aa10.6□□□□□ -0.71
TRAFD1-207ENST00000550051 STRA6Q9BX79 667 aa10.6□□□□□ -0.71
TRAFD1-207ENST00000550051 TMEM121BQ9BXQ6 578 aaPredicted RBP10.6□□□□□ -0.71
TRAFD1-207ENST00000550051 POLR3BQ9NW08 1133 aaPredicted RBP10.6□□□□□ -0.71
TRAFD1-207ENST00000550051 DUS2Q9NX74 493 aaKnown RBP10.6□□□□□ -0.71
TRAFD1-207ENST00000550051 GDAP2Q9NXN4 497 aa10.6□□□□□ -0.71
TRAFD1-207ENST00000550051 PPP4R2Q9NY27 417 aa10.6□□□□□ -0.71
TRAFD1-207ENST00000550051 GCNT4Q9P109 453 aa10.6□□□□□ -0.71
TRAFD1-207ENST00000550051 KIAA1549LQ6ZVL6 1849 aa10.6□□□□□ -0.71
TRAFD1-207ENST00000550051 CHD6Q8TD26 2715 aa10.6□□□□□ -0.71
TRAFD1-207ENST00000550051 TISP43B9A030 160 aa10.59□□□□□ -0.71
TRAFD1-207ENST00000550051 KRT18P05783 430 aaKnown RBP10.59□□□□□ -0.71
TRAFD1-207ENST00000550051 PFKLP17858 780 aa10.59□□□□□ -0.71
TRAFD1-207ENST00000550051 PLCG1P19174 1290 aa10.59□□□□□ -0.71
TRAFD1-207ENST00000550051 CYP2F1P24903 491 aa10.59□□□□□ -0.71
TRAFD1-207ENST00000550051 LONP1P36776 959 aaKnown RBP10.59□□□□□ -0.71
TRAFD1-207ENST00000550051 ZNF77Q15935 545 aa10.59□□□□□ -0.71
TRAFD1-207ENST00000550051 DDR2Q16832 855 aa10.59□□□□□ -0.71
TRAFD1-207ENST00000550051 EML3Q32P44 896 aa10.59□□□□□ -0.71
TRAFD1-207ENST00000550051 CFAP221Q4G0U5 840 aa10.59□□□□□ -0.71
TRAFD1-207ENST00000550051 PSAPL1Q6NUJ1 521 aa10.59□□□□□ -0.71
TRAFD1-207ENST00000550051 PDCL2Q8N4E4 241 aa10.59□□□□□ -0.71
TRAFD1-207ENST00000550051 LRRC52Q8N7C0 313 aa10.59□□□□□ -0.71
TRAFD1-207ENST00000550051 CXorf38Q8TB03 319 aa10.59□□□□□ -0.71
TRAFD1-207ENST00000550051 CACTINQ8WUQ7 758 aaKnown RBP10.59□□□□□ -0.71
TRAFD1-207ENST00000550051 POMGNT1Q8WZA1 660 aa10.59□□□□□ -0.71
TRAFD1-207ENST00000550051 SLC39A7Q92504 469 aa10.59□□□□□ -0.71
TRAFD1-207ENST00000550051 ACDQ96AP0 544 aa10.59□□□□□ -0.71
TRAFD1-207ENST00000550051 CEP295NLQ96MC4 621 aa10.59□□□□□ -0.71
TRAFD1-207ENST00000550051 ZNF560Q96MR9 790 aa10.59□□□□□ -0.71
TRAFD1-207ENST00000550051 HHIPQ96QV1 700 aa10.59□□□□□ -0.71
TRAFD1-207ENST00000550051 SMOC1Q9H4F8 434 aa10.59□□□□□ -0.71
TRAFD1-207ENST00000550051 ZHX3Q9H4I2 956 aa10.59□□□□□ -0.71
TRAFD1-207ENST00000550051 GTF3C4Q9UKN8 822 aa10.59□□□□□ -0.71
TRAFD1-207ENST00000550051 MAGED2Q9UNF1 606 aaPredicted RBP10.59□□□□□ -0.71
TRAFD1-207ENST00000550051 WASF3Q9UPY6 502 aa10.59□□□□□ -0.71
TRAFD1-207ENST00000550051 BOLA1Q9Y3E2 137 aa10.59□□□□□ -0.71
TRAFD1-207ENST00000550051 LAMA1P25391 3075 aa10.59□□□□□ -0.71
TRAFD1-207ENST00000550051 THADAQ6YHU6 1953 aa10.59□□□□□ -0.71
TRAFD1-207ENST00000550051 TRAV19A0A0A6YYK7 116 aa10.58□□□□□ -0.72
TRAFD1-207ENST00000550051 C4orf47A7E2U8 309 aa10.58□□□□□ -0.72
TRAFD1-207ENST00000550051 GABRDO14764 452 aa10.58□□□□□ -0.72
TRAFD1-207ENST00000550051 DCLK1O15075 740 aa10.58□□□□□ -0.72
TRAFD1-207ENST00000550051 HUS1O60921 280 aa10.58□□□□□ -0.72
TRAFD1-207ENST00000550051 TBCAO75347 108 aaKnown RBP10.58□□□□□ -0.72
TRAFD1-207ENST00000550051 TADA3O75528 432 aa10.58□□□□□ -0.72
TRAFD1-207ENST00000550051 BMP15O95972 392 aa10.58□□□□□ -0.72
TRAFD1-207ENST00000550051 LDHAP00338 332 aaKnown RBP10.58□□□□□ -0.72
TRAFD1-207ENST00000550051 CEACAM1P13688 526 aa10.58□□□□□ -0.72
TRAFD1-207ENST00000550051 LHX1P48742 406 aa10.58□□□□□ -0.72
TRAFD1-207ENST00000550051 GPR15P49685 360 aa10.58□□□□□ -0.72
TRAFD1-207ENST00000550051 MYL7Q01449 175 aa10.58□□□□□ -0.72
TRAFD1-207ENST00000550051 CREB5Q02930 508 aa10.58□□□□□ -0.72
TRAFD1-207ENST00000550051 USP39Q53GS9 565 aaKnown RBP10.58□□□□□ -0.72
TRAFD1-207ENST00000550051 INTS6LQ5JSJ4 861 aaKnown RBP10.58□□□□□ -0.72
TRAFD1-207ENST00000550051 DAB2IPQ5VWQ8 1189 aa10.58□□□□□ -0.72
TRAFD1-207ENST00000550051 NAIF1Q69YI7 327 aaPredicted RBP10.58□□□□□ -0.72
TRAFD1-207ENST00000550051 TCEAL6Q6IPX3 200 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms