RNA–Protein interactions for RNA: ENST00000549550.1

TCHP-208, Transcript of trichoplein keratin filament binding, humanhuman

TSL 3

Gene TCHP, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-208ENST00000549550 RPF1Q9H9Y2 349 aaKnown RBP16.72■□□□□ 0.27
TCHP-208ENST00000549550 FBRSL1Q9HCM7 1045 aaKnown RBP16.72■□□□□ 0.27
TCHP-208ENST00000549550 ZMYM5Q9UJ78 669 aa16.72■□□□□ 0.27
TCHP-208ENST00000549550 HELZP42694 1942 aaKnown RBP16.72■□□□□ 0.27
TCHP-208ENST00000549550 ANAPC1Q9H1A4 1944 aa16.72■□□□□ 0.27
TCHP-208ENST00000549550 NBEAQ8NFP9 2946 aa16.72■□□□□ 0.27
TCHP-208ENST00000549550 PTPRDP23468 1912 aa16.71■□□□□ 0.27
TCHP-208ENST00000549550 DSPP15924 2871 aaKnown RBP16.71■□□□□ 0.27
TCHP-208ENST00000549550 SYCE3A1L190 88 aa16.71■□□□□ 0.27
TCHP-208ENST00000549550 C4orf47A7E2U8 309 aa16.71■□□□□ 0.27
TCHP-208ENST00000549550 GIPC1O14908 333 aa16.71■□□□□ 0.27
TCHP-208ENST00000549550 DCLK1O15075 740 aa16.71■□□□□ 0.27
TCHP-208ENST00000549550 OGTO15294 1046 aa16.71■□□□□ 0.27
TCHP-208ENST00000549550 CYP11A1P05108 521 aa16.71■□□□□ 0.27
TCHP-208ENST00000549550 ADRB2P07550 413 aa16.71■□□□□ 0.27
TCHP-208ENST00000549550 ARSAP15289 507 aa16.71■□□□□ 0.27
TCHP-208ENST00000549550 LIG4P49917 911 aa16.71■□□□□ 0.27
TCHP-208ENST00000549550 CREB5Q02930 508 aa16.71■□□□□ 0.27
TCHP-208ENST00000549550 C9orf57Q5W0N0 161 aa16.71■□□□□ 0.27
TCHP-208ENST00000549550 NAIF1Q69YI7 327 aaPredicted RBP16.71■□□□□ 0.27
TCHP-208ENST00000549550 JADE1Q6IE81 842 aa16.71■□□□□ 0.27
TCHP-208ENST00000549550 TMEM150AQ86TG1 271 aa16.71■□□□□ 0.27
TCHP-208ENST00000549550 RPLP0P6Q8NHW5 317 aa16.71■□□□□ 0.27
TCHP-208ENST00000549550 USP13Q92995 863 aaPredicted RBP16.71■□□□□ 0.27
TCHP-208ENST00000549550 FAM212AQ96EL1 285 aa16.71■□□□□ 0.27
TCHP-208ENST00000549550 TSPAN18Q96SJ8 248 aa16.71■□□□□ 0.27
TCHP-208ENST00000549550 TSPY26PQ9H489 355 aa16.71■□□□□ 0.27
TCHP-208ENST00000549550 TDP1Q9NUW8 608 aa16.71■□□□□ 0.27
TCHP-208ENST00000549550 ZMIZ1Q9ULJ6 1067 aa16.71■□□□□ 0.27
TCHP-208ENST00000549550 DMXL2Q8TDJ6 3036 aa16.71■□□□□ 0.27
TCHP-208ENST00000549550 NPHP3-ACAD11A0A0J9YXS1 232 aa16.7■□□□□ 0.26
TCHP-208ENST00000549550 A0A1B0GVL5 298 aa16.7■□□□□ 0.26
TCHP-208ENST00000549550 LNP1A1A4G5 178 aa16.7■□□□□ 0.26
TCHP-208ENST00000549550 H0YCG3 227 aa16.7■□□□□ 0.26
TCHP-208ENST00000549550 HNRNPDLO14979 420 aaKnown RBP16.7■□□□□ 0.26
TCHP-208ENST00000549550 RHOBTB1O94844 696 aa16.7■□□□□ 0.26
TCHP-208ENST00000549550 NFICP08651 508 aa16.7■□□□□ 0.26
TCHP-208ENST00000549550 DRD1P21728 446 aa16.7■□□□□ 0.26
TCHP-208ENST00000549550 PAX3P23760 479 aa16.7■□□□□ 0.26
TCHP-208ENST00000549550 GALK1P51570 392 aa16.7■□□□□ 0.26
TCHP-208ENST00000549550 NCKAP1LP55160 1127 aa16.7■□□□□ 0.26
TCHP-208ENST00000549550 NLRP12P59046 1061 aa16.7■□□□□ 0.26
TCHP-208ENST00000549550 AMPD2Q01433 879 aa16.7■□□□□ 0.26
TCHP-208ENST00000549550 FOXC1Q12948 553 aa16.7■□□□□ 0.26
TCHP-208ENST00000549550 KARSQ15046 597 aaKnown RBP16.7■□□□□ 0.26
TCHP-208ENST00000549550 CC2D1AQ6P1N0 951 aaPredicted RBP16.7■□□□□ 0.26
TCHP-208ENST00000549550 SYT2Q8N9I0 419 aaPredicted RBP16.7■□□□□ 0.26
TCHP-208ENST00000549550 RIN3Q8TB24 985 aa16.7■□□□□ 0.26
TCHP-208ENST00000549550 PLIN2Q99541 437 aa16.7■□□□□ 0.26
TCHP-208ENST00000549550 P2RY13Q9BPV8 354 aa16.7■□□□□ 0.26
TCHP-208ENST00000549550 CUEDC2Q9H467 287 aa16.7■□□□□ 0.26
TCHP-208ENST00000549550 ABI2Q9NYB9 513 aaPredicted RBP16.7■□□□□ 0.26
TCHP-208ENST00000549550 BCLAF3A2AJT9 711 aaKnown RBP16.69■□□□□ 0.26
TCHP-208ENST00000549550 PIRO00625 290 aa16.69■□□□□ 0.26
TCHP-208ENST00000549550 APBB3O95704 486 aa16.69■□□□□ 0.26
TCHP-208ENST00000549550 F11P03951 625 aa16.69■□□□□ 0.26
TCHP-208ENST00000549550 HAPLN1P10915 354 aaPredicted RBP16.69■□□□□ 0.26
TCHP-208ENST00000549550 SPINK2P20155 84 aa16.69■□□□□ 0.26
TCHP-208ENST00000549550 DDX6P26196 483 aaKnown RBP eCLIP16.69■□□□□ 0.26
TCHP-208ENST00000549550 SLC12A3P55017 1021 aa16.69■□□□□ 0.26
TCHP-208ENST00000549550 ZNF252P-AS1Q0IIN9 211 aa16.69■□□□□ 0.26
TCHP-208ENST00000549550 COL9A2Q14055 689 aaPredicted RBP16.69■□□□□ 0.26
TCHP-208ENST00000549550 FBXO43Q4G163 708 aa16.69■□□□□ 0.26
TCHP-208ENST00000549550 DAB2IPQ5VWQ8 1189 aa16.69■□□□□ 0.26
TCHP-208ENST00000549550 TXNDC8Q6A555 127 aa16.69■□□□□ 0.26
TCHP-208ENST00000549550 SYT13Q7L8C5 426 aa16.69■□□□□ 0.26
TCHP-208ENST00000549550 LRRTM3Q86VH5 581 aa16.69■□□□□ 0.26
TCHP-208ENST00000549550 METTL23Q86XA0 190 aa16.69■□□□□ 0.26
TCHP-208ENST00000549550 KCTD17Q8N5Z5 321 aa16.69■□□□□ 0.26
TCHP-208ENST00000549550 SPPL2BQ8TCT7 592 aa16.69■□□□□ 0.26
TCHP-208ENST00000549550 C2orf15Q8WU43 125 aaKnown RBP16.69■□□□□ 0.26
TCHP-208ENST00000549550 CLIC6Q96NY7 704 aa16.69■□□□□ 0.26
TCHP-208ENST00000549550 PNMA5Q96PV4 448 aa16.69■□□□□ 0.26
TCHP-208ENST00000549550 CCSER1Q9C0I3 900 aa16.69■□□□□ 0.26
TCHP-208ENST00000549550 KIF9Q9HAQ2 790 aa16.69■□□□□ 0.26
TCHP-208ENST00000549550 MAGEF1Q9HAY2 307 aa16.69■□□□□ 0.26
TCHP-208ENST00000549550 KCND2Q9NZV8 630 aa16.69■□□□□ 0.26
TCHP-208ENST00000549550 LARSQ9P2J5 1176 aaKnown RBP16.69■□□□□ 0.26
TCHP-208ENST00000549550 EBF1Q9UH73 591 aa16.69■□□□□ 0.26
TCHP-208ENST00000549550 DSEQ9UL01 958 aa16.69■□□□□ 0.26
TCHP-208ENST00000549550 TBX20Q9UMR3 447 aa16.69■□□□□ 0.26
TCHP-208ENST00000549550 TNRC6BQ9UPQ9 1833 aaKnown RBP16.68■□□□□ 0.26
TCHP-208ENST00000549550 ASCC3Q8N3C0 2202 aaKnown RBP16.68■□□□□ 0.26
TCHP-208ENST00000549550 PKD1L2Q7Z442 2459 aa16.68■□□□□ 0.26
TCHP-208ENST00000549550 ANO9A1A5B4 782 aa16.68■□□□□ 0.26
TCHP-208ENST00000549550 VWA3AA6NCI4 1184 aa16.68■□□□□ 0.26
TCHP-208ENST00000549550 MYL1P05976 194 aa16.68■□□□□ 0.26
TCHP-208ENST00000549550 HMGA1P17096 107 aaKnown RBP16.68■□□□□ 0.26
TCHP-208ENST00000549550 GBP1P32455 592 aa16.68■□□□□ 0.26
TCHP-208ENST00000549550 GJA4P35212 333 aa16.68■□□□□ 0.26
TCHP-208ENST00000549550 DMC1Q14565 340 aa16.68■□□□□ 0.26
TCHP-208ENST00000549550 TMEM132DQ14C87 1099 aa16.68■□□□□ 0.26
TCHP-208ENST00000549550 PDGFRLQ15198 375 aa16.68■□□□□ 0.26
TCHP-208ENST00000549550 HYIQ5T013 277 aa16.68■□□□□ 0.26
TCHP-208ENST00000549550 SH3PXD2AQ5TCZ1 1133 aa16.68■□□□□ 0.26
TCHP-208ENST00000549550 SASS6Q6UVJ0 657 aa16.68■□□□□ 0.26
TCHP-208ENST00000549550 KRBA2Q6ZNG9 492 aa16.68■□□□□ 0.26
TCHP-208ENST00000549550 CD302Q8IX05 232 aa16.68■□□□□ 0.26
TCHP-208ENST00000549550 THEM5Q8N1Q8 247 aa16.68■□□□□ 0.26
TCHP-208ENST00000549550 IQUBQ8NA54 791 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms