RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 CDHR5Q9HBB8 845 aa10.53□□□□□ -0.72
RAB5B-206ENST00000549505 NME7Q9Y5B8 376 aa10.53□□□□□ -0.72
RAB5B-206ENST00000549505 GRIN2DO15399 1336 aa10.53□□□□□ -0.72
RAB5B-206ENST00000549505 TSC2P49815 1807 aa10.53□□□□□ -0.72
RAB5B-206ENST00000549505 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.53□□□□□ -0.72
RAB5B-206ENST00000549505 C2CD4BA6NLJ0 364 aa10.53□□□□□ -0.72
RAB5B-206ENST00000549505 RALAP11233 206 aa10.53□□□□□ -0.72
RAB5B-206ENST00000549505 PMS2P54278 862 aa10.53□□□□□ -0.72
RAB5B-206ENST00000549505 SNX16P57768 344 aa10.53□□□□□ -0.72
RAB5B-206ENST00000549505 HIBCHQ6NVY1 386 aaPredicted RBP10.53□□□□□ -0.72
RAB5B-206ENST00000549505 PASD1Q8IV76 773 aa10.53□□□□□ -0.72
RAB5B-206ENST00000549505 ALLCQ8N6M5 410 aa10.53□□□□□ -0.72
RAB5B-206ENST00000549505 TOP6BLQ8N6T0 577 aa10.53□□□□□ -0.72
RAB5B-206ENST00000549505 TTC13Q8NBP0 860 aa10.53□□□□□ -0.72
RAB5B-206ENST00000549505 KLHDC9Q8NEP7 349 aa10.53□□□□□ -0.72
RAB5B-206ENST00000549505 KHSRPQ92945 711 aaKnown RBP eCLIP10.53□□□□□ -0.72
RAB5B-206ENST00000549505 MTRF1LQ9UGC7 380 aaKnown RBP10.53□□□□□ -0.72
RAB5B-206ENST00000549505 HMGXB4Q9UGU5 601 aa10.53□□□□□ -0.72
RAB5B-206ENST00000549505 LRCH4O75427 683 aa10.52□□□□□ -0.72
RAB5B-206ENST00000549505 TOMM70O94826 608 aa10.52□□□□□ -0.72
RAB5B-206ENST00000549505 KRT3P12035 628 aa10.52□□□□□ -0.72
RAB5B-206ENST00000549505 ATF7P17544 494 aaPredicted RBP10.52□□□□□ -0.72
RAB5B-206ENST00000549505 CTGFP29279 349 aa10.52□□□□□ -0.72
RAB5B-206ENST00000549505 NDST1P52848 882 aa10.52□□□□□ -0.72
RAB5B-206ENST00000549505 FSCN1Q16658 493 aaKnown RBP10.52□□□□□ -0.72
RAB5B-206ENST00000549505 LLGL2Q6P1M3 1020 aa10.52□□□□□ -0.72
RAB5B-206ENST00000549505 CCDC89Q8N998 374 aa10.52□□□□□ -0.72
RAB5B-206ENST00000549505 SMG8Q8ND04 991 aaKnown RBP10.52□□□□□ -0.72
RAB5B-206ENST00000549505 FBXO25Q8TCJ0 367 aa10.52□□□□□ -0.72
RAB5B-206ENST00000549505 KBTBD7Q8WVZ9 684 aa10.52□□□□□ -0.72
RAB5B-206ENST00000549505 KIF12Q96FN5 646 aa10.52□□□□□ -0.72
RAB5B-206ENST00000549505 MCEEQ96PE7 176 aa10.52□□□□□ -0.72
RAB5B-206ENST00000549505 PPP1R10Q96QC0 940 aaKnown RBP10.52□□□□□ -0.72
RAB5B-206ENST00000549505 MTG1Q9BT17 334 aaPredicted RBP10.52□□□□□ -0.72
RAB5B-206ENST00000549505 EIF2AQ9BY44 585 aaKnown RBP10.52□□□□□ -0.72
RAB5B-206ENST00000549505 AP5M1Q9H0R1 490 aa10.52□□□□□ -0.72
RAB5B-206ENST00000549505 CHST7Q9NS84 486 aa10.52□□□□□ -0.72
RAB5B-206ENST00000549505 ASNSD1Q9NWL6 643 aa10.52□□□□□ -0.72
RAB5B-206ENST00000549505 CAND2O75155 1236 aa10.52□□□□□ -0.73
RAB5B-206ENST00000549505 GAS8O95995 478 aa10.52□□□□□ -0.73
RAB5B-206ENST00000549505 CD58P19256 250 aa10.52□□□□□ -0.73
RAB5B-206ENST00000549505 RFC1P35251 1148 aaPredicted RBP10.52□□□□□ -0.73
RAB5B-206ENST00000549505 PTPN9P43378 593 aa10.52□□□□□ -0.73
RAB5B-206ENST00000549505 ZNF157P51786 506 aaPredicted RBP10.52□□□□□ -0.73
RAB5B-206ENST00000549505 YARSP54577 528 aaKnown RBP10.52□□□□□ -0.73
RAB5B-206ENST00000549505 PTPROQ16827 1216 aa10.52□□□□□ -0.73
RAB5B-206ENST00000549505 OLFML1Q6UWY5 402 aa10.52□□□□□ -0.73
RAB5B-206ENST00000549505 RTP4Q96DX8 246 aa10.52□□□□□ -0.73
RAB5B-206ENST00000549505 FAM212AQ96EL1 285 aa10.52□□□□□ -0.73
RAB5B-206ENST00000549505 ZNF560Q96MR9 790 aa10.52□□□□□ -0.73
RAB5B-206ENST00000549505 TBCBQ99426 244 aa10.52□□□□□ -0.73
RAB5B-206ENST00000549505 SLC12A6Q9UHW9 1150 aa10.52□□□□□ -0.73
RAB5B-206ENST00000549505 GGA2Q9UJY4 613 aa10.52□□□□□ -0.73
RAB5B-206ENST00000549505 R3HDM2Q9Y2K5 976 aaKnown RBP10.52□□□□□ -0.73
RAB5B-206ENST00000549505 ATXN2Q99700 1313 aaKnown RBP10.52□□□□□ -0.73
RAB5B-206ENST00000549505 GABRDO14764 452 aa10.51□□□□□ -0.73
RAB5B-206ENST00000549505 ALDH1A1P00352 501 aa10.51□□□□□ -0.73
RAB5B-206ENST00000549505 TSHRP16473 764 aa10.51□□□□□ -0.73
RAB5B-206ENST00000549505 RAP1GAPP47736 663 aa10.51□□□□□ -0.73
RAB5B-206ENST00000549505 GUCY2FP51841 1108 aa10.51□□□□□ -0.73
RAB5B-206ENST00000549505 KRT17Q04695 432 aa10.51□□□□□ -0.73
RAB5B-206ENST00000549505 DHX9Q08211 1270 aaKnown RBP10.51□□□□□ -0.73
RAB5B-206ENST00000549505 SERINC5Q86VE9 423 aa10.51□□□□□ -0.73
RAB5B-206ENST00000549505 TMEM40Q8WWA1 233 aa10.51□□□□□ -0.73
RAB5B-206ENST00000549505 RIN2Q8WYP3 895 aaPredicted RBP10.51□□□□□ -0.73
RAB5B-206ENST00000549505 RNF25Q96BH1 459 aaPredicted RBP10.51□□□□□ -0.73
RAB5B-206ENST00000549505 CNPY3Q9BT09 278 aa10.51□□□□□ -0.73
RAB5B-206ENST00000549505 DNAI2Q9GZS0 605 aa10.51□□□□□ -0.73
RAB5B-206ENST00000549505 FETUBQ9UGM5 382 aa10.51□□□□□ -0.73
RAB5B-206ENST00000549505 FRMPD3Q5JV73 1810 aa10.51□□□□□ -0.73
RAB5B-206ENST00000549505 PATJQ8NI35 1801 aa10.51□□□□□ -0.73
RAB5B-206ENST00000549505 SMIM28A0A1B0GU29 152 aa10.51□□□□□ -0.73
RAB5B-206ENST00000549505 DCAF8L1A6NGE4 600 aa10.51□□□□□ -0.73
RAB5B-206ENST00000549505 F8VP50 259 aa10.51□□□□□ -0.73
RAB5B-206ENST00000549505 TRUB2O95900 331 aaKnown RBP10.51□□□□□ -0.73
RAB5B-206ENST00000549505 VCPP55072 806 aaKnown RBP10.51□□□□□ -0.73
RAB5B-206ENST00000549505 CDH8P55286 799 aa10.51□□□□□ -0.73
RAB5B-206ENST00000549505 HLTFQ14527 1009 aaKnown RBP eCLIP10.51□□□□□ -0.73
RAB5B-206ENST00000549505 CCL14Q16627 93 aa10.51□□□□□ -0.73
RAB5B-206ENST00000549505 KIZQ2M2Z5 673 aa10.51□□□□□ -0.73
RAB5B-206ENST00000549505 SOWAHAQ2M3V2 549 aa10.51□□□□□ -0.73
RAB5B-206ENST00000549505 CATSPER4Q7RTX7 472 aa10.51□□□□□ -0.73
RAB5B-206ENST00000549505 PSTKQ8IV42 348 aaKnown RBP10.51□□□□□ -0.73
RAB5B-206ENST00000549505 CCDC105Q8IYK2 499 aa10.51□□□□□ -0.73
RAB5B-206ENST00000549505 SCML4Q8N228 414 aa10.51□□□□□ -0.73
RAB5B-206ENST00000549505 KCTD13Q8WZ19 329 aa10.51□□□□□ -0.73
RAB5B-206ENST00000549505 RUFY1Q96T51 708 aa10.51□□□□□ -0.73
RAB5B-206ENST00000549505 SENP6Q9GZR1 1112 aaPredicted RBP10.51□□□□□ -0.73
RAB5B-206ENST00000549505 PPCSQ9HAB8 311 aa10.51□□□□□ -0.73
RAB5B-206ENST00000549505 SNTG2Q9NY99 539 aa10.51□□□□□ -0.73
RAB5B-206ENST00000549505 EURLQ9NYK6 297 aa10.51□□□□□ -0.73
RAB5B-206ENST00000549505 RIPK2O43353 540 aa10.51□□□□□ -0.73
RAB5B-206ENST00000549505 ZNF623O75123 536 aa10.51□□□□□ -0.73
RAB5B-206ENST00000549505 ADAMTS4O75173 837 aa10.51□□□□□ -0.73
RAB5B-206ENST00000549505 OSTNP61366 133 aa10.51□□□□□ -0.73
RAB5B-206ENST00000549505 PSMC1P62191 440 aaKnown RBP10.51□□□□□ -0.73
RAB5B-206ENST00000549505 BYSLQ13895 437 aaKnown RBP10.51□□□□□ -0.73
RAB5B-206ENST00000549505 HADHQ16836 314 aaKnown RBP10.51□□□□□ -0.73
RAB5B-206ENST00000549505 MFSD7Q6UXD7 560 aa10.51□□□□□ -0.73
RAB5B-206ENST00000549505 ZCCHC9Q8N567 271 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms