RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 TTC4O95801 387 aa11.68□□□□□ -0.54
LINC00661-204ENST00000549354 MFAP3P55082 362 aa11.68□□□□□ -0.54
LINC00661-204ENST00000549354 NLRP11P59045 1033 aaKnown RBP11.68□□□□□ -0.54
LINC00661-204ENST00000549354 TFAMQ00059 246 aaKnown RBP11.68□□□□□ -0.54
LINC00661-204ENST00000549354 LAMTOR4Q0VGL1 99 aa11.68□□□□□ -0.54
LINC00661-204ENST00000549354 GRM1Q13255 1194 aa11.68□□□□□ -0.54
LINC00661-204ENST00000549354 SIX1Q15475 284 aaPredicted RBP11.68□□□□□ -0.54
LINC00661-204ENST00000549354 ZNF484Q5JVG2 852 aa11.68□□□□□ -0.54
LINC00661-204ENST00000549354 IZUMO3Q5VZ72 239 aa11.68□□□□□ -0.54
LINC00661-204ENST00000549354 ECHDC2Q86YB7 292 aa11.68□□□□□ -0.54
LINC00661-204ENST00000549354 ZNF516Q92618 1163 aa11.68□□□□□ -0.54
LINC00661-204ENST00000549354 FAM81BQ96LP2 452 aa11.68□□□□□ -0.54
LINC00661-204ENST00000549354 SYNCQ9H7C4 482 aa11.68□□□□□ -0.54
LINC00661-204ENST00000549354 METTL5Q9NRN9 209 aaKnown RBP11.68□□□□□ -0.54
LINC00661-204ENST00000549354 C1orf112Q9NSG2 853 aa11.68□□□□□ -0.54
LINC00661-204ENST00000549354 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.68□□□□□ -0.54
LINC00661-204ENST00000549354 NINJ2Q9NZG7 142 aa11.68□□□□□ -0.54
LINC00661-204ENST00000549354 NOP53Q9NZM5 478 aaKnown RBP11.68□□□□□ -0.54
LINC00661-204ENST00000549354 NKX1-2Q9UD57 310 aaPredicted RBP11.68□□□□□ -0.54
LINC00661-204ENST00000549354 EXOC1LA0A1B0GW35 172 aa11.67□□□□□ -0.54
LINC00661-204ENST00000549354 F8VP50 259 aa11.67□□□□□ -0.54
LINC00661-204ENST00000549354 ABLIM1O14639 778 aa11.67□□□□□ -0.54
LINC00661-204ENST00000549354 TLR3O15455 904 aaKnown RBP11.67□□□□□ -0.54
LINC00661-204ENST00000549354 KITP10721 976 aa11.67□□□□□ -0.54
LINC00661-204ENST00000549354 CA4P22748 312 aa11.67□□□□□ -0.54
LINC00661-204ENST00000549354 ZC3H18Q86VM9 953 aaKnown RBP11.67□□□□□ -0.54
LINC00661-204ENST00000549354 TRIM50Q86XT4 487 aa11.67□□□□□ -0.54
LINC00661-204ENST00000549354 LRRC71Q8N4P6 559 aa11.67□□□□□ -0.54
LINC00661-204ENST00000549354 WNT8AQ9H1J5 351 aa11.67□□□□□ -0.54
LINC00661-204ENST00000549354 ERAP1Q9NZ08 941 aa11.67□□□□□ -0.54
LINC00661-204ENST00000549354 GTF3C4Q9UKN8 822 aa11.67□□□□□ -0.54
LINC00661-204ENST00000549354 NR2E3Q9Y5X4 410 aa11.67□□□□□ -0.54
LINC00661-204ENST00000549354 ZSWIM8A7E2V4 1837 aa11.67□□□□□ -0.54
LINC00661-204ENST00000549354 TRPM7Q96QT4 1865 aa11.67□□□□□ -0.54
LINC00661-204ENST00000549354 COL1A2P08123 1366 aa11.67□□□□□ -0.54
LINC00661-204ENST00000549354 SLC15A5A6NIM6 579 aa11.67□□□□□ -0.54
LINC00661-204ENST00000549354 TTLL13PA6NNM8 815 aa11.67□□□□□ -0.54
LINC00661-204ENST00000549354 C4BPAP04003 597 aaKnown RBP11.67□□□□□ -0.54
LINC00661-204ENST00000549354 LACTBP83111 547 aaPredicted RBP11.67□□□□□ -0.54
LINC00661-204ENST00000549354 ATP11AP98196 1134 aa11.67□□□□□ -0.54
LINC00661-204ENST00000549354 ZACNQ401N2 412 aa11.67□□□□□ -0.54
LINC00661-204ENST00000549354 CGB2Q6NT52 195 aa11.67□□□□□ -0.54
LINC00661-204ENST00000549354 BZW1Q7L1Q6 419 aaKnown RBP11.67□□□□□ -0.54
LINC00661-204ENST00000549354 MAML3Q96JK9 1138 aa11.67□□□□□ -0.54
LINC00661-204ENST00000549354 RUNDC3BQ96NL0 473 aa11.67□□□□□ -0.54
LINC00661-204ENST00000549354 RBM15Q96T37 977 aaKnown RBP eCLIP11.67□□□□□ -0.54
LINC00661-204ENST00000549354 C2orf40Q9H1Z8 148 aa11.67□□□□□ -0.54
LINC00661-204ENST00000549354 MARCOQ9UEW3 520 aaPredicted RBP11.67□□□□□ -0.54
LINC00661-204ENST00000549354 ARL2BPQ9Y2Y0 163 aa11.67□□□□□ -0.54
LINC00661-204ENST00000549354 A0A0G2JND7 137 aa11.66□□□□□ -0.54
LINC00661-204ENST00000549354 PROZP22891 400 aa11.66□□□□□ -0.54
LINC00661-204ENST00000549354 RAP1GAPP47736 663 aa11.66□□□□□ -0.54
LINC00661-204ENST00000549354 CCNHP51946 323 aaPredicted RBP11.66□□□□□ -0.54
LINC00661-204ENST00000549354 DRG2P55039 364 aaKnown RBP11.66□□□□□ -0.54
LINC00661-204ENST00000549354 GCNT1Q02742 428 aa11.66□□□□□ -0.54
LINC00661-204ENST00000549354 BBS9Q3SYG4 887 aa11.66□□□□□ -0.54
LINC00661-204ENST00000549354 WDR44Q5JSH3 913 aa11.66□□□□□ -0.54
LINC00661-204ENST00000549354 TLDC1Q6P9B6 456 aa11.66□□□□□ -0.54
LINC00661-204ENST00000549354 ENOSF1Q7L5Y1 443 aa11.66□□□□□ -0.54
LINC00661-204ENST00000549354 PLEKHH3Q7Z736 793 aa11.66□□□□□ -0.54
LINC00661-204ENST00000549354 IFNLR1Q8IU57 520 aaPredicted RBP11.66□□□□□ -0.54
LINC00661-204ENST00000549354 DTX3LQ8TDB6 740 aa11.66□□□□□ -0.54
LINC00661-204ENST00000549354 MCEEQ96PE7 176 aa11.66□□□□□ -0.54
LINC00661-204ENST00000549354 MYLK2Q9H1R3 596 aa11.66□□□□□ -0.54
LINC00661-204ENST00000549354 NOCTQ9UK39 431 aaKnown RBP11.66□□□□□ -0.54
LINC00661-204ENST00000549354 CNTNAP2Q9UHC6 1331 aa11.66□□□□□ -0.54
LINC00661-204ENST00000549354 CCDC195A0A1B0GUA6 201 aa11.66□□□□□ -0.54
LINC00661-204ENST00000549354 C22orf31O95567 290 aa11.66□□□□□ -0.54
LINC00661-204ENST00000549354 SSTR1P30872 391 aa11.66□□□□□ -0.54
LINC00661-204ENST00000549354 PSEN1P49768 467 aa11.66□□□□□ -0.54
LINC00661-204ENST00000549354 TAF11Q15544 211 aa11.66□□□□□ -0.54
LINC00661-204ENST00000549354 C11orf63Q6NUN7 778 aa11.66□□□□□ -0.54
LINC00661-204ENST00000549354 P3H4Q92791 437 aa11.66□□□□□ -0.54
LINC00661-204ENST00000549354 SNF8Q96H20 258 aa11.66□□□□□ -0.54
LINC00661-204ENST00000549354 ACO2Q99798 780 aaKnown RBP11.66□□□□□ -0.54
LINC00661-204ENST00000549354 FZD8Q9H461 694 aa11.66□□□□□ -0.54
LINC00661-204ENST00000549354 PTPRHQ9HD43 1115 aa11.66□□□□□ -0.54
LINC00661-204ENST00000549354 DNPEPQ9ULA0 475 aa11.66□□□□□ -0.54
LINC00661-204ENST00000549354 IVNS1ABPQ9Y6Y0 642 aa11.66□□□□□ -0.54
LINC00661-204ENST00000549354 SYNJ2BP-COX16A0A087WUM0 186 aa11.66□□□□□ -0.54
LINC00661-204ENST00000549354 A0A1W2PPM1 405 aa11.66□□□□□ -0.54
LINC00661-204ENST00000549354 GAS8O95995 478 aa11.66□□□□□ -0.54
LINC00661-204ENST00000549354 LGALS2P05162 132 aa11.66□□□□□ -0.54
LINC00661-204ENST00000549354 CDH8P55286 799 aa11.66□□□□□ -0.54
LINC00661-204ENST00000549354 MCL1Q07820 350 aa11.66□□□□□ -0.54
LINC00661-204ENST00000549354 ANKRD20A2Q5SQ80 823 aa11.66□□□□□ -0.54
LINC00661-204ENST00000549354 ANKRD20A1Q5TYW2 823 aa11.66□□□□□ -0.54
LINC00661-204ENST00000549354 ANKRD20A3Q5VUR7 823 aa11.66□□□□□ -0.54
LINC00661-204ENST00000549354 CTAGE3PQ8IX95 158 aa11.66□□□□□ -0.54
LINC00661-204ENST00000549354 TRIM56Q9BRZ2 755 aaKnown RBP11.66□□□□□ -0.54
LINC00661-204ENST00000549354 C16orf70Q9BSU1 422 aa11.66□□□□□ -0.54
LINC00661-204ENST00000549354 CALN1Q9BXU9 219 aa11.66□□□□□ -0.54
LINC00661-204ENST00000549354 MRPL4Q9BYD3 311 aaKnown RBP11.66□□□□□ -0.54
LINC00661-204ENST00000549354 SHCBP1LQ9BZQ2 653 aa11.66□□□□□ -0.54
LINC00661-204ENST00000549354 RNPEPQ9H4A4 650 aa11.66□□□□□ -0.54
LINC00661-204ENST00000549354 COX16Q9P0S2 106 aa11.66□□□□□ -0.54
LINC00661-204ENST00000549354 ENTPD5O75356 428 aa11.65□□□□□ -0.54
LINC00661-204ENST00000549354 TOM1L1O75674 476 aa11.65□□□□□ -0.54
LINC00661-204ENST00000549354 KRT1P04264 644 aa11.65□□□□□ -0.54
LINC00661-204ENST00000549354 ARSEP51690 589 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms