RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 MAPK8P45983 427 aa13.18□□□□□ -0.3
DDX54-206ENST00000549271 FAM193AP78312 1265 aa13.18□□□□□ -0.3
DDX54-206ENST00000549271 CYP4F8P98187 520 aa13.18□□□□□ -0.3
DDX54-206ENST00000549271 AMPD2Q01433 879 aa13.18□□□□□ -0.3
DDX54-206ENST00000549271 YWHAHQ04917 246 aaPredicted RBP13.18□□□□□ -0.3
DDX54-206ENST00000549271 GPR17Q13304 367 aa13.18□□□□□ -0.3
DDX54-206ENST00000549271 ZNF423Q2M1K9 1284 aa13.18□□□□□ -0.3
DDX54-206ENST00000549271 SEZ6Q53EL9 994 aa13.18□□□□□ -0.3
DDX54-206ENST00000549271 TRIM68Q6AZZ1 485 aa13.18□□□□□ -0.3
DDX54-206ENST00000549271 CALML4Q96GE6 196 aa13.18□□□□□ -0.3
DDX54-206ENST00000549271 EPSTI1Q96J88 318 aa13.18□□□□□ -0.3
DDX54-206ENST00000549271 CLIC6Q96NY7 704 aa13.18□□□□□ -0.3
DDX54-206ENST00000549271 USP28Q96RU2 1077 aa13.18□□□□□ -0.3
DDX54-206ENST00000549271 P2RY13Q9BPV8 354 aa13.18□□□□□ -0.3
DDX54-206ENST00000549271 NUSAP1Q9BXS6 441 aaKnown RBP13.18□□□□□ -0.3
DDX54-206ENST00000549271 SLC46A2Q9BY10 475 aa13.18□□□□□ -0.3
DDX54-206ENST00000549271 TPSD1Q9BZJ3 242 aa13.18□□□□□ -0.3
DDX54-206ENST00000549271 CCSER1Q9C0I3 900 aa13.18□□□□□ -0.3
DDX54-206ENST00000549271 ZSCAN16Q9H4T2 348 aaPredicted RBP13.18□□□□□ -0.3
DDX54-206ENST00000549271 IL21Q9HBE4 155 aa13.18□□□□□ -0.3
DDX54-206ENST00000549271 SLC27A5Q9Y2P5 690 aa13.18□□□□□ -0.3
DDX54-206ENST00000549271 SRPRBQ9Y5M8 271 aaKnown RBP13.18□□□□□ -0.3
DDX54-206ENST00000549271 PTPRBP23467 1997 aa13.18□□□□□ -0.3
DDX54-206ENST00000549271 PCDH15Q96QU1 1955 aa13.18□□□□□ -0.3
DDX54-206ENST00000549271 XPOTO43592 962 aaKnown RBP13.17□□□□□ -0.3
DDX54-206ENST00000549271 ARSAP15289 507 aa13.17□□□□□ -0.3
DDX54-206ENST00000549271 ENGP17813 658 aa13.17□□□□□ -0.3
DDX54-206ENST00000549271 TYMPP19971 482 aa13.17□□□□□ -0.3
DDX54-206ENST00000549271 GJA4P35212 333 aa13.17□□□□□ -0.3
DDX54-206ENST00000549271 DHPSP49366 369 aaPredicted RBP13.17□□□□□ -0.3
DDX54-206ENST00000549271 ZNF131P52739 623 aa13.17□□□□□ -0.3
DDX54-206ENST00000549271 CEBPZQ03701 1054 aaKnown RBP13.17□□□□□ -0.3
DDX54-206ENST00000549271 MYBPC2Q14324 1141 aa13.17□□□□□ -0.3
DDX54-206ENST00000549271 MCM6Q14566 821 aa13.17□□□□□ -0.3
DDX54-206ENST00000549271 SLC23A3Q6PIS1 610 aa13.17□□□□□ -0.3
DDX54-206ENST00000549271 CD302Q8IX05 232 aa13.17□□□□□ -0.3
DDX54-206ENST00000549271 CMTM8Q8IZV2 173 aa13.17□□□□□ -0.3
DDX54-206ENST00000549271 TTC9BQ8N6N2 239 aa13.17□□□□□ -0.3
DDX54-206ENST00000549271 TSTD1Q8NFU3 115 aa13.17□□□□□ -0.3
DDX54-206ENST00000549271 RAD54LQ92698 747 aa13.17□□□□□ -0.3
DDX54-206ENST00000549271 CNOT6LQ96LI5 555 aaKnown RBP13.17□□□□□ -0.3
DDX54-206ENST00000549271 SCUBE2Q9NQ36 999 aa13.17□□□□□ -0.3
DDX54-206ENST00000549271 TMEM74BQ9NUR3 256 aa13.17□□□□□ -0.3
DDX54-206ENST00000549271 HSFX1Q9UBD0 423 aa13.17□□□□□ -0.3
DDX54-206ENST00000549271 CCL26Q9Y258 94 aa13.17□□□□□ -0.3
DDX54-206ENST00000549271 MORC2Q9Y6X9 1032 aaPredicted RBP13.17□□□□□ -0.3
DDX54-206ENST00000549271 SHROOM3Q8TF72 1996 aa13.17□□□□□ -0.3
DDX54-206ENST00000549271 CFAP46Q8IYW2 2715 aa13.17□□□□□ -0.3
DDX54-206ENST00000549271 MTMR11A4FU01 709 aa13.16□□□□□ -0.3
DDX54-206ENST00000549271 EIF4E1BA6NMX2 242 aaKnown RBP13.16□□□□□ -0.3
DDX54-206ENST00000549271 TNFRSF10BO14763 440 aa13.16□□□□□ -0.3
DDX54-206ENST00000549271 OGTO15294 1046 aa13.16□□□□□ -0.3
DDX54-206ENST00000549271 SOAT2O75908 522 aa13.16□□□□□ -0.3
DDX54-206ENST00000549271 CDC25CP30307 473 aa13.16□□□□□ -0.3
DDX54-206ENST00000549271 ABCD1P33897 745 aa13.16□□□□□ -0.3
DDX54-206ENST00000549271 DDIT3P35638 169 aa13.16□□□□□ -0.3
DDX54-206ENST00000549271 PPP2R3AQ06190 1150 aa13.16□□□□□ -0.3
DDX54-206ENST00000549271 SLC39A14Q15043 492 aa13.16□□□□□ -0.3
DDX54-206ENST00000549271 ENOX2Q16206 610 aaKnown RBP13.16□□□□□ -0.3
DDX54-206ENST00000549271 SPATA1Q5VX52 437 aa13.16□□□□□ -0.3
DDX54-206ENST00000549271 PEAR1Q5VY43 1037 aaPredicted RBP13.16□□□□□ -0.3
DDX54-206ENST00000549271 ITIH5Q86UX2 942 aa13.16□□□□□ -0.3
DDX54-206ENST00000549271 GPBP1Q86WP2 473 aa13.16□□□□□ -0.3
DDX54-206ENST00000549271 SYT12Q8IV01 421 aa13.16□□□□□ -0.3
DDX54-206ENST00000549271 HSCBQ8IWL3 235 aa13.16□□□□□ -0.3
DDX54-206ENST00000549271 ATAD1Q8NBU5 361 aa13.16□□□□□ -0.3
DDX54-206ENST00000549271 OLIG1Q8TAK6 271 aa13.16□□□□□ -0.3
DDX54-206ENST00000549271 RIN3Q8TB24 985 aa13.16□□□□□ -0.3
DDX54-206ENST00000549271 HNRNPLLQ8WVV9 542 aaKnown RBP13.16□□□□□ -0.3
DDX54-206ENST00000549271 CCDC86Q9H6F5 360 aaKnown RBP13.16□□□□□ -0.3
DDX54-206ENST00000549271 MBD1Q9UIS9 605 aaPredicted RBP13.16□□□□□ -0.3
DDX54-206ENST00000549271 ZMYM5Q9UJ78 669 aa13.16□□□□□ -0.3
DDX54-206ENST00000549271 TIMM13Q9Y5L4 95 aaPredicted RBP13.16□□□□□ -0.3
DDX54-206ENST00000549271 URB1O60287 2271 aaKnown RBP13.16□□□□□ -0.3
DDX54-206ENST00000549271 ANK1P16157 1881 aa13.16□□□□□ -0.3
DDX54-206ENST00000549271 TSC2P49815 1807 aa13.16□□□□□ -0.3
DDX54-206ENST00000549271 A0A0B4J269 797 aa13.15□□□□□ -0.3
DDX54-206ENST00000549271 LACTBL1A8MY62 500 aa13.15□□□□□ -0.3
DDX54-206ENST00000549271 TNFSF9P41273 254 aa13.15□□□□□ -0.3
DDX54-206ENST00000549271 MATR3P43243 847 aaKnown RBP eCLIP13.15□□□□□ -0.3
DDX54-206ENST00000549271 NASPP49321 788 aaPredicted RBP13.15□□□□□ -0.3
DDX54-206ENST00000549271 LIG4P49917 911 aa13.15□□□□□ -0.3
DDX54-206ENST00000549271 SPAG1Q07617 926 aa13.15□□□□□ -0.3
DDX54-206ENST00000549271 DHX8Q14562 1220 aaKnown RBP13.15□□□□□ -0.3
DDX54-206ENST00000549271 USP37Q86T82 979 aa13.15□□□□□ -0.3
DDX54-206ENST00000549271 MDGA1Q8NFP4 955 aa13.15□□□□□ -0.3
DDX54-206ENST00000549271 USP13Q92995 863 aaPredicted RBP13.15□□□□□ -0.3
DDX54-206ENST00000549271 EXOC4Q96A65 974 aa13.15□□□□□ -0.3
DDX54-206ENST00000549271 BICD1Q96G01 975 aa13.15□□□□□ -0.3
DDX54-206ENST00000549271 LRIG1Q96JA1 1093 aa13.15□□□□□ -0.3
DDX54-206ENST00000549271 REEP2Q9BRK0 252 aa13.15□□□□□ -0.3
DDX54-206ENST00000549271 RPF1Q9H9Y2 349 aaKnown RBP13.15□□□□□ -0.3
DDX54-206ENST00000549271 PARVGQ9HBI0 331 aa13.15□□□□□ -0.3
DDX54-206ENST00000549271 TFIP11Q9UBB9 837 aaKnown RBP13.15□□□□□ -0.3
DDX54-206ENST00000549271 CPSF3Q9UKF6 684 aaKnown RBP13.15□□□□□ -0.3
DDX54-206ENST00000549271 DERAQ9Y315 318 aa13.15□□□□□ -0.3
DDX54-206ENST00000549271 CYSRT1A8MQ03 144 aa13.14□□□□□ -0.31
DDX54-206ENST00000549271 HNRNPDLO14979 420 aaKnown RBP13.14□□□□□ -0.31
DDX54-206ENST00000549271 CYP11A1P05108 521 aa13.14□□□□□ -0.31
DDX54-206ENST00000549271 ATF6P18850 670 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms