RNA–Protein interactions for RNA: ENST00000549047.5

ARFGAP1-221, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 5

Gene ARFGAP1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-221ENST00000549047 PARD3BQ8TEW8 1205 aa16.25■□□□□ 0.19
ARFGAP1-221ENST00000549047 TMEM174Q8WUU8 243 aa16.25■□□□□ 0.19
ARFGAP1-221ENST00000549047 MYLPFQ96A32 169 aa16.25■□□□□ 0.19
ARFGAP1-221ENST00000549047 MRPL45Q9BRJ2 306 aaKnown RBP16.25■□□□□ 0.19
ARFGAP1-221ENST00000549047 SLC46A2Q9BY10 475 aa16.25■□□□□ 0.19
ARFGAP1-221ENST00000549047 SMG9Q9H0W8 520 aaKnown RBP16.25■□□□□ 0.19
ARFGAP1-221ENST00000549047 XYLT2Q9H1B5 865 aa16.25■□□□□ 0.19
ARFGAP1-221ENST00000549047 SNX25Q9H3E2 840 aa16.25■□□□□ 0.19
ARFGAP1-221ENST00000549047 CRTAC1Q9NQ79 661 aa16.25■□□□□ 0.19
ARFGAP1-221ENST00000549047 OBP2AQ9NY56 170 aa16.25■□□□□ 0.19
ARFGAP1-221ENST00000549047 LRRIQ3A6PVS8 624 aaPredicted RBP16.24■□□□□ 0.19
ARFGAP1-221ENST00000549047 CHADO15335 359 aa16.24■□□□□ 0.19
ARFGAP1-221ENST00000549047 NCAM2O15394 837 aa16.24■□□□□ 0.19
ARFGAP1-221ENST00000549047 PHACTR2O75167 634 aa16.24■□□□□ 0.19
ARFGAP1-221ENST00000549047 TACC1O75410 805 aa16.24■□□□□ 0.19
ARFGAP1-221ENST00000549047 NOL4O94818 638 aa16.24■□□□□ 0.19
ARFGAP1-221ENST00000549047 RHOBTB3O94955 611 aa16.24■□□□□ 0.19
ARFGAP1-221ENST00000549047 STAU1O95793 577 aaKnown RBP16.24■□□□□ 0.19
ARFGAP1-221ENST00000549047 F11P03951 625 aa16.24■□□□□ 0.19
ARFGAP1-221ENST00000549047 NR3C1P04150 777 aa16.24■□□□□ 0.19
ARFGAP1-221ENST00000549047 ATICP31939 592 aa16.24■□□□□ 0.19
ARFGAP1-221ENST00000549047 GNL1P36915 607 aaPredicted RBP16.24■□□□□ 0.19
ARFGAP1-221ENST00000549047 MAGEA11P43364 429 aa16.24■□□□□ 0.19
ARFGAP1-221ENST00000549047 CLDN10P78369 228 aa16.24■□□□□ 0.19
ARFGAP1-221ENST00000549047 BIRC3Q13489 604 aa16.24■□□□□ 0.19
ARFGAP1-221ENST00000549047 MAPRE1Q15691 268 aaKnown RBP16.24■□□□□ 0.19
ARFGAP1-221ENST00000549047 TDRD10Q5VZ19 366 aaKnown RBP16.24■□□□□ 0.19
ARFGAP1-221ENST00000549047 ASCL5Q7RTU5 278 aa16.24■□□□□ 0.19
ARFGAP1-221ENST00000549047 SCN4BQ8IWT1 228 aa16.24■□□□□ 0.19
ARFGAP1-221ENST00000549047 CSGALNACT1Q8TDX6 532 aa16.24■□□□□ 0.19
ARFGAP1-221ENST00000549047 MRPS31Q92665 395 aaKnown RBP16.24■□□□□ 0.19
ARFGAP1-221ENST00000549047 CCDC47Q96A33 483 aaKnown RBP16.24■□□□□ 0.19
ARFGAP1-221ENST00000549047 SYAP1Q96A49 352 aaPredicted RBP16.24■□□□□ 0.19
ARFGAP1-221ENST00000549047 CLDN23Q96B33 292 aa16.24■□□□□ 0.19
ARFGAP1-221ENST00000549047 SPATA6Q9NWH7 488 aaPredicted RBP16.24■□□□□ 0.19
ARFGAP1-221ENST00000549047 NXF1Q9UBU9 619 aaKnown RBP16.24■□□□□ 0.19
ARFGAP1-221ENST00000549047 ZMYM5Q9UJ78 669 aa16.24■□□□□ 0.19
ARFGAP1-221ENST00000549047 NDRG2Q9UN36 371 aaKnown RBP16.24■□□□□ 0.19
ARFGAP1-221ENST00000549047 F5P12259 2224 aa16.24■□□□□ 0.19
ARFGAP1-221ENST00000549047 TCHHQ07283 1943 aa16.23■□□□□ 0.19
ARFGAP1-221ENST00000549047 RIF1Q5UIP0 2472 aaKnown RBP16.23■□□□□ 0.19
ARFGAP1-221ENST00000549047 PRR23AA6NEV1 266 aa16.23■□□□□ 0.19
ARFGAP1-221ENST00000549047 SLC38A8A6NNN8 435 aa16.23■□□□□ 0.19
ARFGAP1-221ENST00000549047 ZNF202O95125 648 aa16.23■□□□□ 0.19
ARFGAP1-221ENST00000549047 DDX6P26196 483 aaKnown RBP eCLIP16.23■□□□□ 0.191e-11■□□□□ 10.1
ARFGAP1-221ENST00000549047 MAGEA9P43362 315 aa16.23■□□□□ 0.19
ARFGAP1-221ENST00000549047 AP3M2P53677 418 aa16.23■□□□□ 0.19
ARFGAP1-221ENST00000549047 CYP27A1Q02318 531 aa16.23■□□□□ 0.19
ARFGAP1-221ENST00000549047 MAML2Q8IZL2 1156 aaPredicted RBP16.23■□□□□ 0.19
ARFGAP1-221ENST00000549047 CMTM8Q8IZV2 173 aa16.23■□□□□ 0.19
ARFGAP1-221ENST00000549047 ZNF687Q8N1G0 1237 aa16.23■□□□□ 0.19
ARFGAP1-221ENST00000549047 MAB21L3Q8N8X9 362 aa16.23■□□□□ 0.19
ARFGAP1-221ENST00000549047 OR6B3Q8NGW1 331 aa16.23■□□□□ 0.19
ARFGAP1-221ENST00000549047 BPIFB1Q8TDL5 484 aa16.23■□□□□ 0.19
ARFGAP1-221ENST00000549047 FAM3CQ92520 227 aa16.23■□□□□ 0.19
ARFGAP1-221ENST00000549047 NKD2Q969F2 451 aaPredicted RBP16.23■□□□□ 0.19
ARFGAP1-221ENST00000549047 TRMT2BQ96GJ1 504 aaKnown RBP16.23■□□□□ 0.19
ARFGAP1-221ENST00000549047 PCED1BQ96HM7 432 aa16.23■□□□□ 0.19
ARFGAP1-221ENST00000549047 ZFYVE19Q96K21 471 aa16.23■□□□□ 0.19
ARFGAP1-221ENST00000549047 MYRFLQ96LU7 910 aa16.23■□□□□ 0.19
ARFGAP1-221ENST00000549047 MAGEC2Q9UBF1 373 aaPredicted RBP16.23■□□□□ 0.19
ARFGAP1-221ENST00000549047 UXTQ9UBK9 157 aaPredicted RBP16.23■□□□□ 0.19
ARFGAP1-221ENST00000549047 NME7Q9Y5B8 376 aa16.23■□□□□ 0.19
ARFGAP1-221ENST00000549047 CFAP54Q96N23 3096 aa16.22■□□□□ 0.19
ARFGAP1-221ENST00000549047 CALUO43852 315 aaPredicted RBP16.22■□□□□ 0.19
ARFGAP1-221ENST00000549047 TADA3O75528 432 aa16.22■□□□□ 0.19
ARFGAP1-221ENST00000549047 CLSTN1O94985 981 aa16.22■□□□□ 0.19
ARFGAP1-221ENST00000549047 KIF20AO95235 890 aa16.22■□□□□ 0.19
ARFGAP1-221ENST00000549047 FAM163BP0C2L3 166 aa16.22■□□□□ 0.19
ARFGAP1-221ENST00000549047 SP9P0CG40 484 aa16.22■□□□□ 0.19
ARFGAP1-221ENST00000549047 BDNFP23560 247 aa16.22■□□□□ 0.19
ARFGAP1-221ENST00000549047 AVPR1AP37288 418 aa16.22■□□□□ 0.19
ARFGAP1-221ENST00000549047 RPS9P46781 194 aaKnown RBP16.22■□□□□ 0.19
ARFGAP1-221ENST00000549047 KPNA1P52294 538 aaPredicted RBP16.22■□□□□ 0.19
ARFGAP1-221ENST00000549047 DLG4P78352 724 aa16.22■□□□□ 0.19
ARFGAP1-221ENST00000549047 FZD5Q13467 585 aa16.22■□□□□ 0.19
ARFGAP1-221ENST00000549047 NCOA4Q13772 614 aa16.22■□□□□ 0.19
ARFGAP1-221ENST00000549047 ZNF699Q32M78 642 aa16.22■□□□□ 0.19
ARFGAP1-221ENST00000549047 ARHGAP29Q52LW3 1261 aa16.22■□□□□ 0.19
ARFGAP1-221ENST00000549047 MDH1BQ5I0G3 518 aa16.22■□□□□ 0.19
ARFGAP1-221ENST00000549047 CEP135Q66GS9 1140 aa16.22■□□□□ 0.19
ARFGAP1-221ENST00000549047 TXNDC8Q6A555 127 aa16.22■□□□□ 0.19
ARFGAP1-221ENST00000549047 VSTM1Q6UX27 236 aa16.22■□□□□ 0.19
ARFGAP1-221ENST00000549047 MON1AQ86VX9 555 aa16.22■□□□□ 0.19
ARFGAP1-221ENST00000549047 CELF5Q8N6W0 485 aaKnown RBP16.22■□□□□ 0.19
ARFGAP1-221ENST00000549047 MYCBPAPQ8TBZ2 947 aa16.22■□□□□ 0.19
ARFGAP1-221ENST00000549047 VRTNQ9H8Y1 702 aa16.22■□□□□ 0.19
ARFGAP1-221ENST00000549047 MAPK8IP1Q9UQF2 711 aa16.22■□□□□ 0.19
ARFGAP1-221ENST00000549047 TRAF3IP3Q9Y228 551 aa16.22■□□□□ 0.19
ARFGAP1-221ENST00000549047 FRMD4BQ9Y2L6 1034 aa16.22■□□□□ 0.19
ARFGAP1-221ENST00000549047 R4GN57 208 aa16.22■□□□□ 0.19
ARFGAP1-221ENST00000549047 LAMTOR5O43504 91 aa16.21■□□□□ 0.19
ARFGAP1-221ENST00000549047 VNN1O95497 513 aa16.21■□□□□ 0.19
ARFGAP1-221ENST00000549047 C4BPAP04003 597 aaKnown RBP16.21■□□□□ 0.19
ARFGAP1-221ENST00000549047 CCNE1P24864 410 aa16.21■□□□□ 0.19
ARFGAP1-221ENST00000549047 GRIK1P39086 918 aa16.21■□□□□ 0.19
ARFGAP1-221ENST00000549047 SOX9P48436 509 aa16.21■□□□□ 0.19
ARFGAP1-221ENST00000549047 MLLT6P55198 1093 aaPredicted RBP16.21■□□□□ 0.19
ARFGAP1-221ENST00000549047 PLCB2Q00722 1185 aa16.21■□□□□ 0.19
ARFGAP1-221ENST00000549047 KCNB1Q14721 858 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms