RNA–Protein interactions for RNA: ENST00000549015.1

LGR5-205, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 3

Gene LGR5, Length 298 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-205ENST00000549015 ZNF189O75820 626 aaPredicted RBP1.78□□□□□ -2.12
LGR5-205ENST00000549015 ERLIN2O94905 339 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 PRPF6O94906 941 aaKnown RBP1.78□□□□□ -2.12
LGR5-205ENST00000549015 NPTXRO95502 500 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 CRTAMO95727 393 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 LSM8O95777 96 aaKnown RBP1.78□□□□□ -2.12
LGR5-205ENST00000549015 SLC25A27O95847 323 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 RPLP2P05387 115 aaKnown RBP1.78□□□□□ -2.12
LGR5-205ENST00000549015 CTSBP07858 339 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 SNRPB2P08579 225 aaKnown RBP1.78□□□□□ -2.12
LGR5-205ENST00000549015 FAM228BP0C875 321 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 MYBP10242 640 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 MYBL2P10244 700 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 ARP10275 920 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 ALAS1P13196 640 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 ITGA4P13612 1032 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 KCNA2P16389 499 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 CD247P20963 164 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 PAX3P23760 479 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 TBXAS1P24557 533 aaPredicted RBP1.78□□□□□ -2.12
LGR5-205ENST00000549015 KLRC1P26715 233 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 OAS2P29728 719 aaKnown RBP1.78□□□□□ -2.12
LGR5-205ENST00000549015 HOXA13P31271 388 aaPredicted RBP1.78□□□□□ -2.12
LGR5-205ENST00000549015 CHRNA3P32297 505 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 CYP2C19P33261 490 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 NF2P35240 595 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 HOXD13P35453 343 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 ECI1P42126 302 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 SLC1A1P43005 524 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 NAMPTP43490 491 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 IREB2P48200 963 aaKnown RBP1.78□□□□□ -2.12
LGR5-205ENST00000549015 FNTAP49354 379 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 SMCPP49901 116 aaPredicted RBP1.78□□□□□ -2.12
LGR5-205ENST00000549015 GMPSP49915 693 aaPredicted RBP1.78□□□□□ -2.12
LGR5-205ENST00000549015 VAMP7P51809 220 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 AFF1P51825 1210 aaKnown RBP1.78□□□□□ -2.12
LGR5-205ENST00000549015 CDR1P51861 262 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 CASP5P51878 434 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 EFNA5P52803 228 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 DRG2P55039 364 aaKnown RBP1.78□□□□□ -2.12
LGR5-205ENST00000549015 MFAP3P55082 362 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 EIF3BP55884 814 aaKnown RBP1.78□□□□□ -2.12
LGR5-205ENST00000549015 GSCP56915 257 aaPredicted RBP1.78□□□□□ -2.12
LGR5-205ENST00000549015 BPIFB4P59827 614 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 PTENP60484 403 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 IL2P60568 153 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 YWHAEP62258 255 aaKnown RBP1.78□□□□□ -2.12
LGR5-205ENST00000549015 PSMC6P62333 389 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 VSNL1P62760 191 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 JAG1P78504 1218 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 MRPS9P82933 396 aaKnown RBP1.78□□□□□ -2.12
LGR5-205ENST00000549015 RBM10P98175 930 aaKnown RBP1.78□□□□□ -2.12
LGR5-205ENST00000549015 CDC42EP1Q00587 391 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 CDR2Q01850 454 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 GUCY1A3Q02108 690 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 CAV1Q03135 178 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 TAP1Q03518 808 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 PPATQ06203 517 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 GFPT1Q06210 699 aaPredicted RBP1.78□□□□□ -2.12
LGR5-205ENST00000549015 POU5F1BQ06416 359 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 GOLGA8FQ08AF8 430 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 GOLGA8DPQ0D2H9 430 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 PTP4A2Q12974 167 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 ITGB3BPQ13352 177 aaPredicted RBP1.78□□□□□ -2.12
LGR5-205ENST00000549015 PPIL2Q13356 520 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 BIRC3Q13489 604 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 AUHQ13825 339 aaKnown RBP1.78□□□□□ -2.12
LGR5-205ENST00000549015 CTTNQ14247 550 aaKnown RBP1.78□□□□□ -2.12
LGR5-205ENST00000549015 NEDD9Q14511 834 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 RRP1BQ14684 758 aaKnown RBP1.78□□□□□ -2.12
LGR5-205ENST00000549015 COG2Q14746 738 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 EMC2Q15006 297 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 PSMD6Q15008 389 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 SUZ12Q15022 739 aaKnown RBP1.78□□□□□ -2.12
LGR5-205ENST00000549015 MLC1Q15049 377 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 RPS6KA1Q15418 735 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 SF1Q15637 639 aaKnown RBP1.78□□□□□ -2.12
LGR5-205ENST00000549015 STXBP2Q15833 593 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 SEPT7Q16181 437 aaKnown RBP1.78□□□□□ -2.12
LGR5-205ENST00000549015 SNRNP35Q16560 246 aaKnown RBP1.78□□□□□ -2.12
LGR5-205ENST00000549015 NKG7Q16617 165 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 PTPN21Q16825 1174 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 NBPF9Q3BBW0 867 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 ELOA3BQ3SY89 546 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 EPC2Q52LR7 807 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 TRIM61Q5EBN2 209 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 DCAF17Q5H9S7 520 aaPredicted RBP1.78□□□□□ -2.12
LGR5-205ENST00000549015 CFAP58Q5T655 872 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 FAM102BQ5T8I3 360 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 NBPF12Q5TAG4 269 aaPredicted RBP1.78□□□□□ -2.12
LGR5-205ENST00000549015 ARHGEF16Q5VV41 709 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 TCERG1LQ5VWI1 586 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 PRAMEF13Q5VWM6 474 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 FAM160B1Q5W0V3 765 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 SLC6A19Q695T7 634 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 CDCA2Q69YH5 1023 aaPredicted RBP1.78□□□□□ -2.12
LGR5-205ENST00000549015 GTF2IRD2BQ6EKJ0 949 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 SLFN12LQ6IEE8 588 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 SNRNP48Q6IEG0 339 aaKnown RBP1.78□□□□□ -2.12
LGR5-205ENST00000549015 DPY19L2P1Q6NXN4 242 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms