RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 PCDHB5Q9Y5E4 795 aa14.61□□□□□ -0.07
CDX2-202ENST00000548877 PATE3B3GLJ2 98 aa14.6□□□□□ -0.07
CDX2-202ENST00000548877 CYB561D2O14569 222 aa14.6□□□□□ -0.07
CDX2-202ENST00000548877 TADA3O75528 432 aa14.6□□□□□ -0.07
CDX2-202ENST00000548877 NOL4O94818 638 aa14.6□□□□□ -0.07
CDX2-202ENST00000548877 NFICP08651 508 aa14.6□□□□□ -0.07
CDX2-202ENST00000548877 GBP1P32455 592 aa14.6□□□□□ -0.07
CDX2-202ENST00000548877 LIG4P49917 911 aa14.6□□□□□ -0.07
CDX2-202ENST00000548877 RING1Q06587 406 aa14.6□□□□□ -0.07
CDX2-202ENST00000548877 LMAN2Q12907 356 aa14.6□□□□□ -0.07
CDX2-202ENST00000548877 TMEM132DQ14C87 1099 aa14.6□□□□□ -0.07
CDX2-202ENST00000548877 CYP2U1Q7Z449 544 aa14.6□□□□□ -0.07
CDX2-202ENST00000548877 TSTD1Q8NFU3 115 aa14.6□□□□□ -0.07
CDX2-202ENST00000548877 ZCCHC14Q8WYQ9 949 aaKnown RBP14.6□□□□□ -0.07
CDX2-202ENST00000548877 BICD1Q96G01 975 aa14.6□□□□□ -0.07
CDX2-202ENST00000548877 PNMA5Q96PV4 448 aa14.6□□□□□ -0.07
CDX2-202ENST00000548877 ABCB6Q9NP58 842 aa14.6□□□□□ -0.07
CDX2-202ENST00000548877 DUS2Q9NX74 493 aaKnown RBP14.6□□□□□ -0.07
CDX2-202ENST00000548877 UXTQ9UBK9 157 aaPredicted RBP14.6□□□□□ -0.07
CDX2-202ENST00000548877 ODF2LQ9ULJ1 636 aa14.6□□□□□ -0.07
CDX2-202ENST00000548877 PCDHB6Q9Y5E3 794 aa14.6□□□□□ -0.07
CDX2-202ENST00000548877 CACNA1EQ15878 2313 aa14.6□□□□□ -0.07
CDX2-202ENST00000548877 HELZP42694 1942 aaKnown RBP14.59□□□□□ -0.07
CDX2-202ENST00000548877 HNRNPDLO14979 420 aaKnown RBP14.59□□□□□ -0.07
CDX2-202ENST00000548877 CAPNS1P04632 268 aa14.59□□□□□ -0.07
CDX2-202ENST00000548877 BCKDHBP21953 392 aa14.59□□□□□ -0.07
CDX2-202ENST00000548877 TAF6P49848 677 aa14.59□□□□□ -0.07
CDX2-202ENST00000548877 RAD51AP2Q09MP3 1159 aa14.59□□□□□ -0.07
CDX2-202ENST00000548877 NR1H3Q13133 447 aa14.59□□□□□ -0.07
CDX2-202ENST00000548877 NFE2Q16621 373 aaPredicted RBP14.59□□□□□ -0.07
CDX2-202ENST00000548877 ARSHQ5FYA8 562 aa14.59□□□□□ -0.07
CDX2-202ENST00000548877 SPDYCQ5MJ68 293 aa14.59□□□□□ -0.07
CDX2-202ENST00000548877 WSCD1Q658N2 575 aa14.59□□□□□ -0.07
CDX2-202ENST00000548877 SLC39A4Q6P5W5 647 aa14.59□□□□□ -0.07
CDX2-202ENST00000548877 DTHD1Q6ZMT9 781 aa14.59□□□□□ -0.07
CDX2-202ENST00000548877 PIP4P1Q86T03 277 aa14.59□□□□□ -0.07
CDX2-202ENST00000548877 KIAA1958Q8N8K9 716 aa14.59□□□□□ -0.07
CDX2-202ENST00000548877 DEFB124Q8NES8 71 aa14.59□□□□□ -0.07
CDX2-202ENST00000548877 SNX21Q969T3 373 aa14.59□□□□□ -0.07
CDX2-202ENST00000548877 TMLHEQ9NVH6 421 aa14.59□□□□□ -0.07
CDX2-202ENST00000548877 ABI2Q9NYB9 513 aaPredicted RBP14.59□□□□□ -0.07
CDX2-202ENST00000548877 GCNT4Q9P109 453 aa14.59□□□□□ -0.07
CDX2-202ENST00000548877 MMP17Q9ULZ9 603 aa14.59□□□□□ -0.07
CDX2-202ENST00000548877 FREM2Q5SZK8 3169 aa14.59□□□□□ -0.07
CDX2-202ENST00000548877 GON4LQ3T8J9 2241 aa14.58□□□□□ -0.07
CDX2-202ENST00000548877 K7EQS6 105 aa14.58□□□□□ -0.08
CDX2-202ENST00000548877 TNFRSF10BO14763 440 aa14.58□□□□□ -0.08
CDX2-202ENST00000548877 USP17L7P0C7H9 530 aa14.58□□□□□ -0.08
CDX2-202ENST00000548877 PLA2G4BP0C869 781 aa14.58□□□□□ -0.08
CDX2-202ENST00000548877 CHRM1P11229 460 aaPredicted RBP14.58□□□□□ -0.08
CDX2-202ENST00000548877 DPP6P42658 865 aa14.58□□□□□ -0.08
CDX2-202ENST00000548877 IFNAR2P48551 515 aa14.58□□□□□ -0.08
CDX2-202ENST00000548877 NEK4P51957 841 aa14.58□□□□□ -0.08
CDX2-202ENST00000548877 ZNF131P52739 623 aa14.58□□□□□ -0.08
CDX2-202ENST00000548877 RABEP1Q15276 862 aa14.58□□□□□ -0.08
CDX2-202ENST00000548877 PEAR1Q5VY43 1037 aaPredicted RBP14.58□□□□□ -0.08
CDX2-202ENST00000548877 HSCBQ8IWL3 235 aa14.58□□□□□ -0.08
CDX2-202ENST00000548877 MDGA1Q8NFP4 955 aa14.58□□□□□ -0.08
CDX2-202ENST00000548877 SLC22A12Q96S37 553 aa14.58□□□□□ -0.08
CDX2-202ENST00000548877 PYM1Q9BRP8 204 aaKnown RBP14.58□□□□□ -0.08
CDX2-202ENST00000548877 MSTO1Q9BUK6 570 aa14.58□□□□□ -0.08
CDX2-202ENST00000548877 SLC32A1Q9H598 525 aa14.58□□□□□ -0.08
CDX2-202ENST00000548877 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.58□□□□□ -0.08
CDX2-202ENST00000548877 LHX6Q9UPM6 363 aa14.58□□□□□ -0.08
CDX2-202ENST00000548877 STYXL1Q9Y6J8 313 aa14.58□□□□□ -0.08
CDX2-202ENST00000548877 TRAV19A0A0A6YYK7 116 aa14.57□□□□□ -0.08
CDX2-202ENST00000548877 KPNA7A9QM74 516 aa14.57□□□□□ -0.08
CDX2-202ENST00000548877 TAF4O00268 1085 aa14.57□□□□□ -0.08
CDX2-202ENST00000548877 SLC26A4O43511 780 aa14.57□□□□□ -0.08
CDX2-202ENST00000548877 PFKLP17858 780 aa14.57□□□□□ -0.08
CDX2-202ENST00000548877 ABCD1P33897 745 aa14.57□□□□□ -0.08
CDX2-202ENST00000548877 OPRD1P41143 372 aa14.57□□□□□ -0.08
CDX2-202ENST00000548877 P2RY2P41231 377 aa14.57□□□□□ -0.08
CDX2-202ENST00000548877 GPR15P49685 360 aa14.57□□□□□ -0.08
CDX2-202ENST00000548877 RPL10AP62906 217 aaKnown RBP14.57□□□□□ -0.08
CDX2-202ENST00000548877 MRPS21P82921 87 aaKnown RBP14.57□□□□□ -0.08
CDX2-202ENST00000548877 HMGN5P82970 282 aaKnown RBP14.57□□□□□ -0.08
CDX2-202ENST00000548877 SEMA3BQ13214 749 aa14.57□□□□□ -0.08
CDX2-202ENST00000548877 CRY1Q16526 586 aa14.57□□□□□ -0.08
CDX2-202ENST00000548877 GAB4Q2WGN9 574 aa14.57□□□□□ -0.08
CDX2-202ENST00000548877 HSF5Q4G112 596 aaPredicted RBP14.57□□□□□ -0.08
CDX2-202ENST00000548877 TMEM119Q4V9L6 283 aa14.57□□□□□ -0.08
CDX2-202ENST00000548877 SLC23A3Q6PIS1 610 aa14.57□□□□□ -0.08
CDX2-202ENST00000548877 NT5DC4Q86YG4 428 aa14.57□□□□□ -0.08
CDX2-202ENST00000548877 PKMYT1Q99640 499 aa14.57□□□□□ -0.08
CDX2-202ENST00000548877 ACBD6Q9BR61 282 aa14.57□□□□□ -0.08
CDX2-202ENST00000548877 TPSD1Q9BZJ3 242 aa14.57□□□□□ -0.08
CDX2-202ENST00000548877 DPP3Q9NY33 737 aa14.57□□□□□ -0.08
CDX2-202ENST00000548877 INVSQ9Y283 1065 aa14.57□□□□□ -0.08
CDX2-202ENST00000548877 WNT6Q9Y6F9 365 aa14.57□□□□□ -0.08
CDX2-202ENST00000548877 ITPR1Q14643 2758 aa14.56□□□□□ -0.08
CDX2-202ENST00000548877 NPHP3-ACAD11A0A0J9YXS1 232 aa14.56□□□□□ -0.08
CDX2-202ENST00000548877 H0Y626 953 aa14.56□□□□□ -0.08
CDX2-202ENST00000548877 HYAL3O43820 417 aaPredicted RBP14.56□□□□□ -0.08
CDX2-202ENST00000548877 PRPF40AO75400 957 aaKnown RBP14.56□□□□□ -0.08
CDX2-202ENST00000548877 TRIM16O95361 564 aa14.56□□□□□ -0.08
CDX2-202ENST00000548877 HOXD12P35452 270 aa14.56□□□□□ -0.08
CDX2-202ENST00000548877 GTF2BQ00403 316 aa14.56□□□□□ -0.08
CDX2-202ENST00000548877 TSPY1Q01534 308 aa14.56□□□□□ -0.08
CDX2-202ENST00000548877 PSMD2Q13200 908 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms