RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 PDLIM2Q96JY6 352 aa5.34□□□□□ -1.55
APP-217ENST00000548570 GUCD1Q96NT3 240 aa5.34□□□□□ -1.55
APP-217ENST00000548570 SAMD11Q96NU1 681 aa5.34□□□□□ -1.55
APP-217ENST00000548570 KLHL5Q96PQ7 755 aa5.34□□□□□ -1.55
APP-217ENST00000548570 PCDHB18PQ96TA0 734 aa5.34□□□□□ -1.55
APP-217ENST00000548570 TTPALQ9BTX7 342 aa5.34□□□□□ -1.55
APP-217ENST00000548570 B3GNT5Q9BYG0 378 aa5.34□□□□□ -1.55
APP-217ENST00000548570 STK33Q9BYT3 514 aa5.34□□□□□ -1.55
APP-217ENST00000548570 RHOBTB2Q9BYZ6 727 aa5.34□□□□□ -1.55
APP-217ENST00000548570 ZCWPW1Q9H0M4 648 aa5.34□□□□□ -1.55
APP-217ENST00000548570 KDM4CQ9H3R0 1056 aa5.34□□□□□ -1.55
APP-217ENST00000548570 PRDM12Q9H4Q4 367 aa5.34□□□□□ -1.55
APP-217ENST00000548570 SLC28A3Q9HAS3 691 aa5.34□□□□□ -1.55
APP-217ENST00000548570 CYP3A43Q9HB55 503 aa5.34□□□□□ -1.55
APP-217ENST00000548570 NLRC4Q9NPP4 1024 aa5.34□□□□□ -1.55
APP-217ENST00000548570 DDX43Q9NXZ2 648 aaKnown RBP5.34□□□□□ -1.55
APP-217ENST00000548570 NOCTQ9UK39 431 aaKnown RBP5.34□□□□□ -1.55
APP-217ENST00000548570 GTF3C4Q9UKN8 822 aa5.34□□□□□ -1.55
APP-217ENST00000548570 BARX2Q9UMQ3 279 aaPredicted RBP5.34□□□□□ -1.55
APP-217ENST00000548570 CAPN11Q9UMQ6 739 aa5.34□□□□□ -1.55
APP-217ENST00000548570 LZTS1Q9Y250 596 aa5.34□□□□□ -1.55
APP-217ENST00000548570 PCDHB12Q9Y5F1 795 aa5.34□□□□□ -1.55
APP-217ENST00000548570 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.34□□□□□ -1.55
APP-217ENST00000548570 BACE2Q9Y5Z0 518 aa5.34□□□□□ -1.55
APP-217ENST00000548570 IRAK3Q9Y616 596 aa5.34□□□□□ -1.55
APP-217ENST00000548570 TTC3P53804 2025 aa5.34□□□□□ -1.55
APP-217ENST00000548570 REV3LO60673 3130 aa5.34□□□□□ -1.56
APP-217ENST00000548570 SPTBN5Q9NRC6 3674 aaKnown RBP5.34□□□□□ -1.56
APP-217ENST00000548570 A0A1W2PQJ5 194 aa5.33□□□□□ -1.56
APP-217ENST00000548570 LRRC53A6NM62 1247 aa5.33□□□□□ -1.56
APP-217ENST00000548570 TULP2O00295 520 aa5.33□□□□□ -1.56
APP-217ENST00000548570 C2CD2LO14523 706 aa5.33□□□□□ -1.56
APP-217ENST00000548570 PER2O15055 1255 aa5.33□□□□□ -1.56
APP-217ENST00000548570 HUS1O60921 280 aa5.33□□□□□ -1.56
APP-217ENST00000548570 CLASP2O75122 1294 aaKnown RBP5.33□□□□□ -1.56
APP-217ENST00000548570 BEST1O76090 585 aa5.33□□□□□ -1.56
APP-217ENST00000548570 ABLIM3O94929 683 aa5.33□□□□□ -1.56
APP-217ENST00000548570 SEC24AO95486 1093 aa5.33□□□□□ -1.56
APP-217ENST00000548570 CXCL14O95715 111 aa5.33□□□□□ -1.56
APP-217ENST00000548570 CCDC130P13994 396 aa5.33□□□□□ -1.56
APP-217ENST00000548570 PTPN1P18031 435 aaKnown RBP5.33□□□□□ -1.56
APP-217ENST00000548570 POU3F3P20264 500 aaPredicted RBP5.33□□□□□ -1.56
APP-217ENST00000548570 HNRNPH3P31942 346 aaKnown RBP5.33□□□□□ -1.56
APP-217ENST00000548570 SSTR3P32745 418 aaPredicted RBP5.33□□□□□ -1.56
APP-217ENST00000548570 SOX5P35711 763 aa5.33□□□□□ -1.56
APP-217ENST00000548570 GNL1P36915 607 aaPredicted RBP5.33□□□□□ -1.56
APP-217ENST00000548570 GLUD2P49448 558 aa5.33□□□□□ -1.56
APP-217ENST00000548570 GPR15P49685 360 aa5.33□□□□□ -1.56
APP-217ENST00000548570 ADKP55263 362 aaKnown RBP5.33□□□□□ -1.56
APP-217ENST00000548570 TNNC1P63316 161 aa5.33□□□□□ -1.56
APP-217ENST00000548570 TPM4P67936 248 aa5.33□□□□□ -1.56
APP-217ENST00000548570 SKOR1P84550 965 aa5.33□□□□□ -1.56
APP-217ENST00000548570 ROR1Q01973 937 aa5.33□□□□□ -1.56
APP-217ENST00000548570 UBE3AQ05086 875 aa5.33□□□□□ -1.56
APP-217ENST00000548570 GPR17Q13304 367 aa5.33□□□□□ -1.56
APP-217ENST00000548570 RAB33AQ14088 237 aa5.33□□□□□ -1.56
APP-217ENST00000548570 PSMD5Q16401 504 aa5.33□□□□□ -1.56
APP-217ENST00000548570 ARHGAP44Q17R89 818 aa5.33□□□□□ -1.56
APP-217ENST00000548570 ASTE1Q2TB18 679 aaPredicted RBP5.33□□□□□ -1.56
APP-217ENST00000548570 INTS6LQ5JSJ4 861 aaKnown RBP5.33□□□□□ -1.56
APP-217ENST00000548570 PLPP4Q5VZY2 271 aa5.33□□□□□ -1.56
APP-217ENST00000548570 ARHGAP17Q68EM7 881 aa5.33□□□□□ -1.56
APP-217ENST00000548570 SPECC1LQ69YQ0 1117 aa5.33□□□□□ -1.56
APP-217ENST00000548570 OVOS1Q6IE37 1185 aa5.33□□□□□ -1.56
APP-217ENST00000548570 DENND1BQ6P3S1 775 aa5.33□□□□□ -1.56
APP-217ENST00000548570 PDXDC1Q6P996 788 aa5.33□□□□□ -1.56
APP-217ENST00000548570 TMEM270Q6UE05 265 aa5.33□□□□□ -1.56
APP-217ENST00000548570 TMC6Q7Z403 805 aa5.33□□□□□ -1.56
APP-217ENST00000548570 ACOT1Q86TX2 421 aa5.33□□□□□ -1.56
APP-217ENST00000548570 NOP9Q86U38 636 aaKnown RBP5.33□□□□□ -1.56
APP-217ENST00000548570 SLC47A2Q86VL8 602 aa5.33□□□□□ -1.56
APP-217ENST00000548570 TTC30AQ86WT1 665 aa5.33□□□□□ -1.56
APP-217ENST00000548570 CEP57Q86XR8 500 aa5.33□□□□□ -1.56
APP-217ENST00000548570 TMEM139Q8IV31 216 aa5.33□□□□□ -1.56
APP-217ENST00000548570 FUKQ8N0W3 1084 aa5.33□□□□□ -1.56
APP-217ENST00000548570 TMEM86AQ8N2M4 240 aa5.33□□□□□ -1.56
APP-217ENST00000548570 ATAD1Q8NBU5 361 aa5.33□□□□□ -1.56
APP-217ENST00000548570 RBBP8NLQ8NC74 664 aaPredicted RBP5.33□□□□□ -1.56
APP-217ENST00000548570 APPL2Q8NEU8 664 aa5.33□□□□□ -1.56
APP-217ENST00000548570 ZMIZ2Q8NF64 920 aa5.33□□□□□ -1.56
APP-217ENST00000548570 ANKRD20A12PQ8NF67 263 aa5.33□□□□□ -1.56
APP-217ENST00000548570 OR6B3Q8NGW1 331 aa5.33□□□□□ -1.56
APP-217ENST00000548570 MYCBPAPQ8TBZ2 947 aa5.33□□□□□ -1.56
APP-217ENST00000548570 SPATA18Q8TC71 538 aa5.33□□□□□ -1.56
APP-217ENST00000548570 SLC22A17Q8WUG5 538 aa5.33□□□□□ -1.56
APP-217ENST00000548570 SLC20A1Q8WUM9 679 aa5.33□□□□□ -1.56
APP-217ENST00000548570 CPLX3Q8WVH0 158 aa5.33□□□□□ -1.56
APP-217ENST00000548570 MYLPFQ96A32 169 aa5.33□□□□□ -1.56
APP-217ENST00000548570 JAKMIP2Q96AA8 810 aa5.33□□□□□ -1.56
APP-217ENST00000548570 CCDC97Q96F63 343 aaPredicted RBP5.33□□□□□ -1.56
APP-217ENST00000548570 TMEM176AQ96HP8 235 aa5.33□□□□□ -1.56
APP-217ENST00000548570 FAM161BQ96MY7 647 aa5.33□□□□□ -1.56
APP-217ENST00000548570 MMS19Q96T76 1030 aa5.33□□□□□ -1.56
APP-217ENST00000548570 DNAJC7Q99615 494 aa5.33□□□□□ -1.56
APP-217ENST00000548570 TCF25Q9BQ70 676 aa5.33□□□□□ -1.56
APP-217ENST00000548570 SYT15Q9BQS2 421 aa5.33□□□□□ -1.56
APP-217ENST00000548570 ACBD6Q9BR61 282 aa5.33□□□□□ -1.56
APP-217ENST00000548570 C11orf84Q9BUA3 381 aaPredicted RBP5.33□□□□□ -1.56
APP-217ENST00000548570 TRIM5Q9C035 493 aa5.33□□□□□ -1.56
APP-217ENST00000548570 ZNF518BQ9C0D4 1074 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms