RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 PLK5Q496M5 336 aa17.71■□□□□ 0.43
SSH1-208ENST00000548522 SLFN12LQ6IEE8 588 aa17.71■□□□□ 0.43
SSH1-208ENST00000548522 ZNF720Q7Z2F6 126 aa17.71■□□□□ 0.43
SSH1-208ENST00000548522 CXorf38Q8TB03 319 aa17.71■□□□□ 0.43
SSH1-208ENST00000548522 EPSTI1Q96J88 318 aa17.71■□□□□ 0.43
SSH1-208ENST00000548522 ZNF560Q96MR9 790 aa17.71■□□□□ 0.43
SSH1-208ENST00000548522 CYP2S1Q96SQ9 504 aa17.71■□□□□ 0.43
SSH1-208ENST00000548522 FGFBP2Q9BYJ0 223 aa17.71■□□□□ 0.43
SSH1-208ENST00000548522 DDX43Q9NXZ2 648 aaKnown RBP17.71■□□□□ 0.43
SSH1-208ENST00000548522 TBC1D7Q9P0N9 293 aa17.71■□□□□ 0.43
SSH1-208ENST00000548522 ANGPTL2Q9UKU9 493 aa17.71■□□□□ 0.43
SSH1-208ENST00000548522 AGAP1Q9UPQ3 857 aa17.71■□□□□ 0.43
SSH1-208ENST00000548522 ATG13O75143 517 aa17.7■□□□□ 0.42
SSH1-208ENST00000548522 NOL4O94818 638 aa17.7■□□□□ 0.42
SSH1-208ENST00000548522 CSH1P0DML2 217 aa17.7■□□□□ 0.42
SSH1-208ENST00000548522 CSH2P0DML3 217 aa17.7■□□□□ 0.42
SSH1-208ENST00000548522 DDIT3P35638 169 aa17.7■□□□□ 0.42
SSH1-208ENST00000548522 CASP5P51878 434 aa17.7■□□□□ 0.42
SSH1-208ENST00000548522 USP4Q13107 963 aa17.7■□□□□ 0.42
SSH1-208ENST00000548522 PDGFRLQ15198 375 aa17.7■□□□□ 0.42
SSH1-208ENST00000548522 INTS6LQ5JSJ4 861 aaKnown RBP17.7■□□□□ 0.42
SSH1-208ENST00000548522 CC2D1AQ6P1N0 951 aaPredicted RBP17.7■□□□□ 0.42
SSH1-208ENST00000548522 BRSK2Q8IWQ3 736 aa17.7■□□□□ 0.42
SSH1-208ENST00000548522 DDX1Q92499 740 aaKnown RBP17.7■□□□□ 0.42
SSH1-208ENST00000548522 SNX21Q969T3 373 aa17.7■□□□□ 0.42
SSH1-208ENST00000548522 STRA6Q9BX79 667 aa17.7■□□□□ 0.42
SSH1-208ENST00000548522 DUSP15Q9H1R2 295 aaPredicted RBP17.7■□□□□ 0.42
SSH1-208ENST00000548522 ECT2Q9H8V3 914 aa17.7■□□□□ 0.42
SSH1-208ENST00000548522 ZMYM5Q9UJ78 669 aa17.7■□□□□ 0.42
SSH1-208ENST00000548522 RALYQ9UKM9 306 aaKnown RBP17.7■□□□□ 0.42
SSH1-208ENST00000548522 GTF3C4Q9UKN8 822 aa17.7■□□□□ 0.42
SSH1-208ENST00000548522 ATG2BQ96BY7 2078 aa17.7■□□□□ 0.42
SSH1-208ENST00000548522 SPAG17Q6Q759 2223 aa17.7■□□□□ 0.42
SSH1-208ENST00000548522 EML5Q05BV3 1969 aa17.7■□□□□ 0.42
SSH1-208ENST00000548522 GOLGA8IPA6NC78 632 aa17.69■□□□□ 0.42
SSH1-208ENST00000548522 C2orf78A6NCI8 922 aa17.69■□□□□ 0.42
SSH1-208ENST00000548522 GOLGA8JA6NMD2 632 aa17.69■□□□□ 0.42
SSH1-208ENST00000548522 AKAP3O75969 853 aa17.69■□□□□ 0.42
SSH1-208ENST00000548522 IL18RAPO95256 599 aa17.69■□□□□ 0.42
SSH1-208ENST00000548522 DRD1P21728 446 aa17.69■□□□□ 0.42
SSH1-208ENST00000548522 ZNF268Q14587 947 aaPredicted RBP17.69■□□□□ 0.42
SSH1-208ENST00000548522 NFE2Q16621 373 aaPredicted RBP17.69■□□□□ 0.42
SSH1-208ENST00000548522 KRI1Q8N9T8 703 aaKnown RBP17.69■□□□□ 0.42
SSH1-208ENST00000548522 LEO1Q8WVC0 666 aaPredicted RBP17.69■□□□□ 0.42
SSH1-208ENST00000548522 OSCP1Q8WVF1 389 aa17.69■□□□□ 0.42
SSH1-208ENST00000548522 ZC3H10Q96K80 434 aaKnown RBP17.69■□□□□ 0.42
SSH1-208ENST00000548522 DUS2Q9NX74 493 aaKnown RBP17.69■□□□□ 0.42
SSH1-208ENST00000548522 SIX4Q9UIU6 781 aa17.69■□□□□ 0.42
SSH1-208ENST00000548522 INVSQ9Y283 1065 aa17.69■□□□□ 0.42
SSH1-208ENST00000548522 TCHHQ07283 1943 aa17.68■□□□□ 0.42
SSH1-208ENST00000548522 MYMKA6NI61 221 aa17.68■□□□□ 0.42
SSH1-208ENST00000548522 CKMP06732 381 aa17.68■□□□□ 0.42
SSH1-208ENST00000548522 ABCD1P33897 745 aa17.68■□□□□ 0.42
SSH1-208ENST00000548522 FAM160A1Q05DH4 1040 aa17.68■□□□□ 0.42
SSH1-208ENST00000548522 DMC1Q14565 340 aa17.68■□□□□ 0.42
SSH1-208ENST00000548522 EML3Q32P44 896 aa17.68■□□□□ 0.42
SSH1-208ENST00000548522 LMBRD2Q68DH5 695 aaPredicted RBP17.68■□□□□ 0.42
SSH1-208ENST00000548522 CPA6Q8N4T0 437 aa17.68■□□□□ 0.42
SSH1-208ENST00000548522 CAMKK1Q8N5S9 505 aa17.68■□□□□ 0.42
SSH1-208ENST00000548522 ARL14EPQ8N8R7 260 aaPredicted RBP17.68■□□□□ 0.42
SSH1-208ENST00000548522 HVCN1Q96D96 273 aa17.68■□□□□ 0.42
SSH1-208ENST00000548522 TRMT2BQ96GJ1 504 aaKnown RBP17.68■□□□□ 0.42
SSH1-208ENST00000548522 MYRFLQ96LU7 910 aa17.68■□□□□ 0.42
SSH1-208ENST00000548522 ACBD6Q9BR61 282 aa17.68■□□□□ 0.42
SSH1-208ENST00000548522 CBWD1Q9BRT8 395 aa17.68■□□□□ 0.42
SSH1-208ENST00000548522 MTMR12Q9C0I1 747 aa17.68■□□□□ 0.42
SSH1-208ENST00000548522 MRPL44Q9H9J2 332 aaKnown RBP17.68■□□□□ 0.42
SSH1-208ENST00000548522 ABCB6Q9NP58 842 aa17.68■□□□□ 0.42
SSH1-208ENST00000548522 RBAKQ9NYW8 714 aaPredicted RBP17.68■□□□□ 0.42
SSH1-208ENST00000548522 SMC3Q9UQE7 1217 aa17.68■□□□□ 0.42
SSH1-208ENST00000548522 PCDHGA5Q9Y5G8 931 aa17.68■□□□□ 0.42
SSH1-208ENST00000548522 DENND4CQ5VZ89 1909 aa17.68■□□□□ 0.42
SSH1-208ENST00000548522 PTPRJQ12913 1337 aa17.68■□□□□ 0.42
SSH1-208ENST00000548522 IGF2RP11717 2491 aa17.67■□□□□ 0.42
SSH1-208ENST00000548522 HUS1O60921 280 aa17.67■□□□□ 0.42
SSH1-208ENST00000548522 ATP2C2O75185 946 aa17.67■□□□□ 0.42
SSH1-208ENST00000548522 KCNK5O95279 499 aa17.67■□□□□ 0.42
SSH1-208ENST00000548522 APBB3O95704 486 aa17.67■□□□□ 0.42
SSH1-208ENST00000548522 PNPLA4P41247 253 aa17.67■□□□□ 0.42
SSH1-208ENST00000548522 PSMC1P62191 440 aaKnown RBP17.67■□□□□ 0.42
SSH1-208ENST00000548522 RPL10AP62906 217 aaKnown RBP17.67■□□□□ 0.42
SSH1-208ENST00000548522 ZXDBP98169 803 aa17.67■□□□□ 0.42
SSH1-208ENST00000548522 POU5F1Q01860 360 aaKnown RBP17.67■□□□□ 0.42
SSH1-208ENST00000548522 CREB5Q02930 508 aa17.67■□□□□ 0.42
SSH1-208ENST00000548522 PSMD2Q13200 908 aa17.67■□□□□ 0.42
SSH1-208ENST00000548522 L1TD1Q5T7N2 865 aaKnown RBP17.67■□□□□ 0.42
SSH1-208ENST00000548522 RNF43Q68DV7 783 aa17.67■□□□□ 0.42
SSH1-208ENST00000548522 PSAPL1Q6NUJ1 521 aa17.67■□□□□ 0.42
SSH1-208ENST00000548522 SYT13Q7L8C5 426 aa17.67■□□□□ 0.42
SSH1-208ENST00000548522 NT5DC4Q86YG4 428 aa17.67■□□□□ 0.42
SSH1-208ENST00000548522 SCN4BQ8IWT1 228 aa17.67■□□□□ 0.42
SSH1-208ENST00000548522 ADGRF2Q8IZF7 708 aa17.67■□□□□ 0.42
SSH1-208ENST00000548522 SH3RF2Q8TEC5 729 aa17.67■□□□□ 0.42
SSH1-208ENST00000548522 CD101Q93033 1021 aa17.67■□□□□ 0.42
SSH1-208ENST00000548522 DNAJC19Q96DA6 116 aa17.67■□□□□ 0.42
SSH1-208ENST00000548522 EDEM2Q9BV94 578 aa17.67■□□□□ 0.42
SSH1-208ENST00000548522 LSM14BQ9BX40 385 aaKnown RBP17.67■□□□□ 0.42
SSH1-208ENST00000548522 LINC00597Q9H2U6 94 aa17.67■□□□□ 0.42
SSH1-208ENST00000548522 VPS45Q9NRW7 570 aa17.67■□□□□ 0.42
SSH1-208ENST00000548522 GCNT4Q9P109 453 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms