RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 SHKBP1Q8TBC3 707 aa19.98■□□□□ 0.79
PRPF40B-206ENST00000547764 NXPE3Q969Y0 559 aa19.98■□□□□ 0.79
PRPF40B-206ENST00000547764 PCED1BQ96HM7 432 aa19.98■□□□□ 0.79
PRPF40B-206ENST00000547764 MED15Q96RN5 788 aa19.98■□□□□ 0.79
PRPF40B-206ENST00000547764 BCO2Q9BYV7 579 aa19.98■□□□□ 0.79
PRPF40B-206ENST00000547764 RAB20Q9NX57 234 aa19.98■□□□□ 0.79
PRPF40B-206ENST00000547764 NUMBLQ9Y6R0 609 aa19.98■□□□□ 0.79
PRPF40B-206ENST00000547764 A0A1W2PRU2 124 aa19.97■□□□□ 0.79
PRPF40B-206ENST00000547764 GPR37L1O60883 481 aa19.97■□□□□ 0.79
PRPF40B-206ENST00000547764 BDNFP23560 247 aa19.97■□□□□ 0.79
PRPF40B-206ENST00000547764 MAGEA11P43364 429 aa19.97■□□□□ 0.79
PRPF40B-206ENST00000547764 RPL10AP62906 217 aaKnown RBP19.97■□□□□ 0.79
PRPF40B-206ENST00000547764 TAF12Q16514 161 aa19.97■□□□□ 0.79
PRPF40B-206ENST00000547764 TRIM67Q6ZTA4 783 aa19.97■□□□□ 0.79
PRPF40B-206ENST00000547764 GAREM2Q75VX8 874 aa19.97■□□□□ 0.79
PRPF40B-206ENST00000547764 UBALD2Q8IYN6 164 aa19.97■□□□□ 0.79
PRPF40B-206ENST00000547764 SLC44A3Q8N4M1 653 aa19.97■□□□□ 0.79
PRPF40B-206ENST00000547764 B3GALNT2Q8NCR0 500 aa19.97■□□□□ 0.79
PRPF40B-206ENST00000547764 FGF14Q92915 247 aa19.97■□□□□ 0.79
PRPF40B-206ENST00000547764 RPP25Q9BUL9 199 aaKnown RBP19.97■□□□□ 0.79
PRPF40B-206ENST00000547764 NIF3L1Q9GZT8 377 aa19.97■□□□□ 0.79
PRPF40B-206ENST00000547764 COQ4Q9Y3A0 265 aa19.97■□□□□ 0.79
PRPF40B-206ENST00000547764 TECTAO75443 2155 aa19.97■□□□□ 0.79
PRPF40B-206ENST00000547764 GNA14O95837 355 aa19.96■□□□□ 0.79
PRPF40B-206ENST00000547764 HMGA1P17096 107 aaKnown RBP19.96■□□□□ 0.79
PRPF40B-206ENST00000547764 NDST1P52848 882 aa19.96■□□□□ 0.79
PRPF40B-206ENST00000547764 SIGLEC14Q08ET2 396 aa19.96■□□□□ 0.79
PRPF40B-206ENST00000547764 TEAD2Q15562 447 aa19.96■□□□□ 0.79
PRPF40B-206ENST00000547764 TMEM31Q5JXX7 168 aa19.96■□□□□ 0.79
PRPF40B-206ENST00000547764 VSTM1Q6UX27 236 aa19.96■□□□□ 0.79
PRPF40B-206ENST00000547764 MTSS1LQ765P7 747 aa19.96■□□□□ 0.79
PRPF40B-206ENST00000547764 SCN4BQ8IWT1 228 aa19.96■□□□□ 0.79
PRPF40B-206ENST00000547764 STKLD1Q8NE28 680 aa19.96■□□□□ 0.79
PRPF40B-206ENST00000547764 ZSWIM3Q96MP5 696 aa19.96■□□□□ 0.79
PRPF40B-206ENST00000547764 CYP3A43Q9HB55 503 aa19.96■□□□□ 0.79
PRPF40B-206ENST00000547764 HMGXB4Q9UGU5 601 aa19.96■□□□□ 0.79
PRPF40B-206ENST00000547764 FGFR1OPO95684 399 aaKnown RBP19.95■□□□□ 0.78
PRPF40B-206ENST00000547764 FGF19O95750 216 aa19.95■□□□□ 0.78
PRPF40B-206ENST00000547764 GABRR2P28476 465 aa19.95■□□□□ 0.78
PRPF40B-206ENST00000547764 FMO5P49326 533 aa19.95■□□□□ 0.78
PRPF40B-206ENST00000547764 MARSP56192 900 aaKnown RBP19.95■□□□□ 0.78
PRPF40B-206ENST00000547764 NLRP12P59046 1061 aa19.95■□□□□ 0.78
PRPF40B-206ENST00000547764 DPCR1Q3MIW9 517 aa19.95■□□□□ 0.78
PRPF40B-206ENST00000547764 WDR44Q5JSH3 913 aa19.95■□□□□ 0.78
PRPF40B-206ENST00000547764 ACOT1Q86TX2 421 aa19.95■□□□□ 0.78
PRPF40B-206ENST00000547764 UNC93AQ86WB7 457 aa19.95■□□□□ 0.78
PRPF40B-206ENST00000547764 TNIP3Q96KP6 325 aa19.95■□□□□ 0.78
PRPF40B-206ENST00000547764 B3GNT5Q9BYG0 378 aa19.95■□□□□ 0.78
PRPF40B-206ENST00000547764 ATXN3LQ9H3M9 355 aa19.95■□□□□ 0.78
PRPF40B-206ENST00000547764 IL21Q9HBE4 155 aa19.95■□□□□ 0.78
PRPF40B-206ENST00000547764 DUSP12Q9UNI6 340 aa19.95■□□□□ 0.78
PRPF40B-206ENST00000547764 SLC38A8A6NNN8 435 aa19.94■□□□□ 0.78
PRPF40B-206ENST00000547764 CLDN5O00501 218 aa19.94■□□□□ 0.78
PRPF40B-206ENST00000547764 NARSO43776 548 aaKnown RBP19.94■□□□□ 0.78
PRPF40B-206ENST00000547764 CSH1P0DML2 217 aa19.94■□□□□ 0.78
PRPF40B-206ENST00000547764 CSH2P0DML3 217 aa19.94■□□□□ 0.78
PRPF40B-206ENST00000547764 GRIK1P39086 918 aa19.94■□□□□ 0.78
PRPF40B-206ENST00000547764 INCA1Q0VD86 236 aa19.94■□□□□ 0.78
PRPF40B-206ENST00000547764 ORC1Q13415 861 aa19.94■□□□□ 0.78
PRPF40B-206ENST00000547764 FAM78AQ5JUQ0 283 aa19.94■□□□□ 0.78
PRPF40B-206ENST00000547764 TRIM59Q8IWR1 403 aa19.94■□□□□ 0.78
PRPF40B-206ENST00000547764 CRYBG2Q8N1P7 616 aa19.94■□□□□ 0.78
PRPF40B-206ENST00000547764 TATDN2Q93075 761 aa19.94■□□□□ 0.78
PRPF40B-206ENST00000547764 ASIC4Q96FT7 647 aa19.94■□□□□ 0.78
PRPF40B-206ENST00000547764 FAXDC2Q96IV6 333 aa19.94■□□□□ 0.78
PRPF40B-206ENST00000547764 KXD1Q9BQD3 176 aa19.94■□□□□ 0.78
PRPF40B-206ENST00000547764 LRFN3Q9BTN0 628 aa19.94■□□□□ 0.78
PRPF40B-206ENST00000547764 ZNF518BQ9C0D4 1074 aa19.94■□□□□ 0.78
PRPF40B-206ENST00000547764 MAGED2Q9UNF1 606 aaPredicted RBP19.94■□□□□ 0.78
PRPF40B-206ENST00000547764 TMEM221A6NGB7 291 aa19.93■□□□□ 0.78
PRPF40B-206ENST00000547764 M0R296 226 aa19.93■□□□□ 0.78
PRPF40B-206ENST00000547764 PMM2O15305 246 aa19.93■□□□□ 0.78
PRPF40B-206ENST00000547764 NOL4O94818 638 aa19.93■□□□□ 0.78
PRPF40B-206ENST00000547764 MBD3O95983 291 aa19.93■□□□□ 0.78
PRPF40B-206ENST00000547764 CCDC192P0DO97 292 aa19.93■□□□□ 0.78
PRPF40B-206ENST00000547764 CD58P19256 250 aa19.93■□□□□ 0.78
PRPF40B-206ENST00000547764 CDC25CP30307 473 aa19.93■□□□□ 0.78
PRPF40B-206ENST00000547764 CACNA2D1P54289 1103 aa19.93■□□□□ 0.78
PRPF40B-206ENST00000547764 STXBP5Q5T5C0 1151 aa19.93■□□□□ 0.78
PRPF40B-206ENST00000547764 RBM43Q6ZSC3 357 aaKnown RBP19.93■□□□□ 0.78
PRPF40B-206ENST00000547764 ASB16Q96NS5 453 aa19.93■□□□□ 0.78
PRPF40B-206ENST00000547764 TWNKQ96RR1 684 aa19.93■□□□□ 0.78
PRPF40B-206ENST00000547764 GPR88Q9GZN0 384 aa19.93■□□□□ 0.78
PRPF40B-206ENST00000547764 ELOVL4Q9GZR5 314 aa19.93■□□□□ 0.78
PRPF40B-206ENST00000547764 SLITRK6Q9H5Y7 841 aa19.93■□□□□ 0.78
PRPF40B-206ENST00000547764 PTPRDP23468 1912 aa19.93■□□□□ 0.78
PRPF40B-206ENST00000547764 PRR33A8MZF0 331 aa19.92■□□□□ 0.78
PRPF40B-206ENST00000547764 TRIM66O15016 1216 aa19.92■□□□□ 0.78
PRPF40B-206ENST00000547764 CILPO75339 1184 aa19.92■□□□□ 0.78
PRPF40B-206ENST00000547764 ECI2O75521 394 aa19.92■□□□□ 0.78
PRPF40B-206ENST00000547764 F11P03951 625 aa19.92■□□□□ 0.78
PRPF40B-206ENST00000547764 FCARP24071 287 aa19.92■□□□□ 0.78
PRPF40B-206ENST00000547764 CYP4F8P98187 520 aa19.92■□□□□ 0.78
PRPF40B-206ENST00000547764 KCNH2Q12809 1159 aa19.92■□□□□ 0.78
PRPF40B-206ENST00000547764 TANGO2Q6ICL3 276 aa19.92■□□□□ 0.78
PRPF40B-206ENST00000547764 PAQR9Q6ZVX9 377 aa19.92■□□□□ 0.78
PRPF40B-206ENST00000547764 TMEM150AQ86TG1 271 aa19.92■□□□□ 0.78
PRPF40B-206ENST00000547764 ZSCAN18Q8TBC5 510 aaPredicted RBP19.92■□□□□ 0.78
PRPF40B-206ENST00000547764 WHAMMQ8TF30 809 aa19.92■□□□□ 0.78
PRPF40B-206ENST00000547764 SMARCD2Q92925 531 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms