RNA–Protein interactions for RNA: ENST00000547318.5

LETMD1-209, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 2,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-209ENST00000547318 ACSS3Q9H6R3 686 aa15.35■□□□□ 0.05
LETMD1-209ENST00000547318 POC1B-GALNT4F8VUJ3 575 aa15.34■□□□□ 0.05
LETMD1-209ENST00000547318 FZD9O00144 591 aa15.34■□□□□ 0.05
LETMD1-209ENST00000547318 ACKR2O00590 384 aa15.34■□□□□ 0.05
LETMD1-209ENST00000547318 EDN1P05305 212 aa15.34■□□□□ 0.05
LETMD1-209ENST00000547318 HOXC6P09630 235 aa15.34■□□□□ 0.05
LETMD1-209ENST00000547318 P4HA1P13674 534 aa15.34■□□□□ 0.05
LETMD1-209ENST00000547318 KDELR1P24390 212 aa15.34■□□□□ 0.05
LETMD1-209ENST00000547318 STIP1P31948 543 aaKnown RBP15.34■□□□□ 0.05
LETMD1-209ENST00000547318 FOXN2P32314 431 aa15.34■□□□□ 0.05
LETMD1-209ENST00000547318 PCK1P35558 622 aa15.34■□□□□ 0.05
LETMD1-209ENST00000547318 TCF7P36402 384 aaPredicted RBP15.34■□□□□ 0.05
LETMD1-209ENST00000547318 GABRB2P47870 512 aa15.34■□□□□ 0.05
LETMD1-209ENST00000547318 POU5F1BQ06416 359 aa15.34■□□□□ 0.05
LETMD1-209ENST00000547318 LAMTOR4Q0VGL1 99 aa15.34■□□□□ 0.05
LETMD1-209ENST00000547318 MKRN4PQ13434 485 aaPredicted RBP15.34■□□□□ 0.05
LETMD1-209ENST00000547318 ATP13A4Q4VNC1 1196 aa15.34■□□□□ 0.05
LETMD1-209ENST00000547318 SAMD7Q7Z3H4 446 aa15.34■□□□□ 0.05
LETMD1-209ENST00000547318 VSIG1Q86XK7 387 aa15.34■□□□□ 0.05
LETMD1-209ENST00000547318 ECHDC2Q86YB7 292 aa15.34■□□□□ 0.05
LETMD1-209ENST00000547318 WDTC1Q8N5D0 677 aa15.34■□□□□ 0.05
LETMD1-209ENST00000547318 RSAD2Q8WXG1 361 aa15.34■□□□□ 0.05
LETMD1-209ENST00000547318 FAM84AQ96KN4 292 aa15.34■□□□□ 0.05
LETMD1-209ENST00000547318 LRMDAQ9H2I8 198 aa15.34■□□□□ 0.05
LETMD1-209ENST00000547318 VRTNQ9H8Y1 702 aa15.34■□□□□ 0.05
LETMD1-209ENST00000547318 RSAD1Q9HA92 442 aa15.34■□□□□ 0.05
LETMD1-209ENST00000547318 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.34■□□□□ 0.05
LETMD1-209ENST00000547318 EP400Q96L91 3159 aa15.34■□□□□ 0.05
LETMD1-209ENST00000547318 NFKBIEO00221 500 aa15.34■□□□□ 0.05
LETMD1-209ENST00000547318 RNF8O76064 485 aa15.34■□□□□ 0.05
LETMD1-209ENST00000547318 CA4P22748 312 aa15.34■□□□□ 0.05
LETMD1-209ENST00000547318 MSH2P43246 934 aa15.34■□□□□ 0.05
LETMD1-209ENST00000547318 CTCFP49711 727 aaPredicted RBP15.34■□□□□ 0.05
LETMD1-209ENST00000547318 MYO1EQ12965 1108 aa15.34■□□□□ 0.05
LETMD1-209ENST00000547318 FAM47CQ5HY64 1035 aa15.34■□□□□ 0.05
LETMD1-209ENST00000547318 ZNF667Q5HYK9 610 aa15.34■□□□□ 0.05
LETMD1-209ENST00000547318 PAXIP1Q6ZW49 1069 aaPredicted RBP15.34■□□□□ 0.05
LETMD1-209ENST00000547318 PDIK1LQ8N165 341 aa15.34■□□□□ 0.05
LETMD1-209ENST00000547318 CMASQ8NFW8 434 aaPredicted RBP15.34■□□□□ 0.05
LETMD1-209ENST00000547318 SH3TC2Q8TF17 1288 aa15.34■□□□□ 0.05
LETMD1-209ENST00000547318 RSRC1Q96IZ7 334 aaKnown RBP15.34■□□□□ 0.05
LETMD1-209ENST00000547318 LRRC37BQ96QE4 947 aa15.34■□□□□ 0.05
LETMD1-209ENST00000547318 FAM118BQ9BPY3 351 aa15.34■□□□□ 0.05
LETMD1-209ENST00000547318 VPS11Q9H270 941 aa15.34■□□□□ 0.05
LETMD1-209ENST00000547318 FZD8Q9H461 694 aa15.34■□□□□ 0.05
LETMD1-209ENST00000547318 PTPRHQ9HD43 1115 aa15.34■□□□□ 0.05
LETMD1-209ENST00000547318 RABGEF1Q9UJ41 708 aa15.34■□□□□ 0.05
LETMD1-209ENST00000547318 MCF2LO15068 1137 aa15.33■□□□□ 0.04
LETMD1-209ENST00000547318 LRCH4O75427 683 aa15.33■□□□□ 0.04
LETMD1-209ENST00000547318 FAM155BO75949 473 aa15.33■□□□□ 0.04
LETMD1-209ENST00000547318 HARSP12081 509 aaKnown RBP15.33■□□□□ 0.04
LETMD1-209ENST00000547318 ELF1P32519 619 aa15.33■□□□□ 0.04
LETMD1-209ENST00000547318 TNFSF9P41273 254 aa15.33■□□□□ 0.04
LETMD1-209ENST00000547318 OTUD4Q01804 1114 aaKnown RBP15.33■□□□□ 0.04
LETMD1-209ENST00000547318 TNFAIP2Q03169 654 aa15.33■□□□□ 0.04
LETMD1-209ENST00000547318 TFDP2Q14188 446 aa15.33■□□□□ 0.04
LETMD1-209ENST00000547318 PKN2Q16513 984 aaKnown RBP15.33■□□□□ 0.04
LETMD1-209ENST00000547318 C4orf22Q6V702 233 aa15.33■□□□□ 0.04
LETMD1-209ENST00000547318 GLIS1Q8NBF1 620 aa15.33■□□□□ 0.04
LETMD1-209ENST00000547318 ACTL9Q8TC94 416 aa15.33■□□□□ 0.04
LETMD1-209ENST00000547318 RMDN2Q96LZ7 410 aa15.33■□□□□ 0.04
LETMD1-209ENST00000547318 TMEM121Q9BTD3 319 aa15.33■□□□□ 0.04
LETMD1-209ENST00000547318 SAR1AQ9NR31 198 aa15.33■□□□□ 0.04
LETMD1-209ENST00000547318 KLHL11Q9NVR0 708 aa15.33■□□□□ 0.04
LETMD1-209ENST00000547318 ASNSD1Q9NWL6 643 aa15.33■□□□□ 0.04
LETMD1-209ENST00000547318 KIAA1257Q9ULG3 409 aa15.33■□□□□ 0.04
LETMD1-209ENST00000547318 E7ENQ6 273 aa15.33■□□□□ 0.04
LETMD1-209ENST00000547318 TRAFD1O14545 582 aaPredicted RBP15.33■□□□□ 0.04
LETMD1-209ENST00000547318 IL1BP01584 269 aa15.33■□□□□ 0.04
LETMD1-209ENST00000547318 ZSCAN5DPP0CG00 497 aa15.33■□□□□ 0.04
LETMD1-209ENST00000547318 TROVE2P10155 538 aaKnown RBP eCLIP15.33■□□□□ 0.04
LETMD1-209ENST00000547318 SLC8A3P57103 927 aa15.33■□□□□ 0.04
LETMD1-209ENST00000547318 KCNJ2P63252 427 aa15.33■□□□□ 0.04
LETMD1-209ENST00000547318 TFAMQ00059 246 aaKnown RBP15.33■□□□□ 0.04
LETMD1-209ENST00000547318 SEPT7Q16181 437 aaKnown RBP15.33■□□□□ 0.04
LETMD1-209ENST00000547318 PTPN20Q4JDL3 420 aa15.33■□□□□ 0.04
LETMD1-209ENST00000547318 SLC45A4Q5BKX6 768 aa15.33■□□□□ 0.04
LETMD1-209ENST00000547318 ATF7IP2Q5U623 682 aa15.33■□□□□ 0.04
LETMD1-209ENST00000547318 CHADLQ6NUI6 762 aa15.33■□□□□ 0.04
LETMD1-209ENST00000547318 TFAP2BQ92481 460 aa15.33■□□□□ 0.04
LETMD1-209ENST00000547318 CPT1BQ92523 772 aa15.33■□□□□ 0.04
LETMD1-209ENST00000547318 L3MBTL3Q96JM7 780 aaPredicted RBP15.33■□□□□ 0.04
LETMD1-209ENST00000547318 MLXIPLQ9NP71 852 aa15.33■□□□□ 0.04
LETMD1-209ENST00000547318 TNFSF13BQ9Y275 285 aa15.33■□□□□ 0.04
LETMD1-209ENST00000547318 IQANK1A0A1B0GTG1 560 aa15.32■□□□□ 0.04
LETMD1-209ENST00000547318 CFAP69A5D8W1 941 aa15.32■□□□□ 0.04
LETMD1-209ENST00000547318 C2CD2LO14523 706 aa15.32■□□□□ 0.04
LETMD1-209ENST00000547318 CST8O60676 142 aa15.32■□□□□ 0.04
LETMD1-209ENST00000547318 SLC25A27O95847 323 aa15.32■□□□□ 0.04
LETMD1-209ENST00000547318 IFNB1P01574 187 aa15.32■□□□□ 0.04
LETMD1-209ENST00000547318 HMGCRP04035 888 aa15.32■□□□□ 0.04
LETMD1-209ENST00000547318 TCF4P15884 667 aa15.32■□□□□ 0.04
LETMD1-209ENST00000547318 RFC1P35251 1148 aaPredicted RBP15.32■□□□□ 0.04
LETMD1-209ENST00000547318 CCNG1P51959 295 aa15.32■□□□□ 0.04
LETMD1-209ENST00000547318 PSMC1P62191 440 aaKnown RBP15.32■□□□□ 0.04
LETMD1-209ENST00000547318 IRX3P78415 501 aaPredicted RBP15.32■□□□□ 0.04
LETMD1-209ENST00000547318 STILQ15468 1287 aa15.32■□□□□ 0.04
LETMD1-209ENST00000547318 FAM187BQ17R55 369 aa15.32■□□□□ 0.04
LETMD1-209ENST00000547318 ZBTB33Q86T24 672 aa15.32■□□□□ 0.04
LETMD1-209ENST00000547318 SLC4A11Q8NBS3 891 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms