RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 C2CD2Q9Y426 696 aa17.44■□□□□ 0.38
BRF1-208ENST00000546997 TDRD15B5MCY1 1934 aaKnown RBP17.43■□□□□ 0.38
BRF1-208ENST00000546997 TNNC2P02585 160 aa17.43■□□□□ 0.38
BRF1-208ENST00000546997 TNFAIP3P21580 790 aa17.43■□□□□ 0.38
BRF1-208ENST00000546997 MYL6P60660 151 aa17.43■□□□□ 0.38
BRF1-208ENST00000546997 QPCTQ16769 361 aa17.43■□□□□ 0.38
BRF1-208ENST00000546997 LRRC26Q2I0M4 334 aa17.43■□□□□ 0.38
BRF1-208ENST00000546997 C11orf91Q3C1V1 193 aa17.43■□□□□ 0.38
BRF1-208ENST00000546997 ODF2Q5BJF6 829 aa17.43■□□□□ 0.38
BRF1-208ENST00000546997 KIF12Q96FN5 646 aa17.43■□□□□ 0.38
BRF1-208ENST00000546997 ZFP42Q96MM3 310 aa17.43■□□□□ 0.38
BRF1-208ENST00000546997 NT5C1BQ96P26 610 aa17.43■□□□□ 0.38
BRF1-208ENST00000546997 WNT8AQ9H1J5 351 aa17.43■□□□□ 0.38
BRF1-208ENST00000546997 HIPK3Q9H422 1215 aa17.43■□□□□ 0.38
BRF1-208ENST00000546997 APOBEC3GQ9HC16 384 aaKnown RBP17.43■□□□□ 0.38
BRF1-208ENST00000546997 NOD2Q9HC29 1040 aa17.43■□□□□ 0.38
BRF1-208ENST00000546997 SLC12A4Q9UP95 1085 aa17.43■□□□□ 0.38
BRF1-208ENST00000546997 ATF7P17544 494 aaPredicted RBP17.42■□□□□ 0.38
BRF1-208ENST00000546997 GBP2P32456 591 aaPredicted RBP17.42■□□□□ 0.38
BRF1-208ENST00000546997 NOP14P78316 857 aaKnown RBP17.42■□□□□ 0.38
BRF1-208ENST00000546997 PPP2R5EQ16537 467 aa17.42■□□□□ 0.38
BRF1-208ENST00000546997 LRRC57Q8N9N7 239 aa17.42■□□□□ 0.38
BRF1-208ENST00000546997 TPCN2Q8NHX9 752 aa17.42■□□□□ 0.38
BRF1-208ENST00000546997 SCLYQ96I15 445 aa17.42■□□□□ 0.38
BRF1-208ENST00000546997 AGPAT1Q99943 283 aa17.42■□□□□ 0.38
BRF1-208ENST00000546997 PPP1R12CQ9BZL4 782 aa17.42■□□□□ 0.38
BRF1-208ENST00000546997 FAM129AQ9BZQ8 928 aa17.42■□□□□ 0.38
BRF1-208ENST00000546997 CCDC134Q9H6E4 229 aa17.42■□□□□ 0.38
BRF1-208ENST00000546997 LAMA2P24043 3122 aaKnown RBP17.42■□□□□ 0.38
BRF1-208ENST00000546997 ALPK3Q96L96 1907 aa17.42■□□□□ 0.38
BRF1-208ENST00000546997 KIF4AO95239 1232 aa17.42■□□□□ 0.38
BRF1-208ENST00000546997 ASS1P00966 412 aaKnown RBP17.42■□□□□ 0.38
BRF1-208ENST00000546997 ITGB3P05106 788 aa17.42■□□□□ 0.38
BRF1-208ENST00000546997 IBSPP21815 317 aaPredicted RBP17.42■□□□□ 0.38
BRF1-208ENST00000546997 RTN4RL1Q86UN2 441 aaPredicted RBP17.42■□□□□ 0.38
BRF1-208ENST00000546997 HOOK3Q86VS8 718 aa17.42■□□□□ 0.38
BRF1-208ENST00000546997 CCDC26Q8TAB7 109 aa17.42■□□□□ 0.38
BRF1-208ENST00000546997 LINC01599Q8WXQ3 324 aa17.42■□□□□ 0.38
BRF1-208ENST00000546997 C18orf25Q96B23 403 aaPredicted RBP17.42■□□□□ 0.38
BRF1-208ENST00000546997 XPO6Q96QU8 1125 aaKnown RBP17.42■□□□□ 0.38
BRF1-208ENST00000546997 XYLT2Q9H1B5 865 aa17.42■□□□□ 0.38
BRF1-208ENST00000546997 C1orf112Q9NSG2 853 aa17.42■□□□□ 0.38
BRF1-208ENST00000546997 TUBGCP4Q9UGJ1 667 aa17.42■□□□□ 0.38
BRF1-208ENST00000546997 TBX21Q9UL17 535 aa17.42■□□□□ 0.38
BRF1-208ENST00000546997 PACSIN2Q9UNF0 486 aaPredicted RBP17.42■□□□□ 0.38
BRF1-208ENST00000546997 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.42■□□□□ 0.38
BRF1-208ENST00000546997 NUB1Q9Y5A7 615 aa17.42■□□□□ 0.38
BRF1-208ENST00000546997 A0A0U1RQF3 1178 aa17.41■□□□□ 0.38
BRF1-208ENST00000546997 SMIM28A0A1B0GU29 152 aa17.41■□□□□ 0.38
BRF1-208ENST00000546997 PGRMC1O00264 195 aaKnown RBP17.41■□□□□ 0.38
BRF1-208ENST00000546997 LIN7AO14910 233 aaPredicted RBP17.41■□□□□ 0.38
BRF1-208ENST00000546997 ZC3H11AO75152 810 aaKnown RBP eCLIP17.41■□□□□ 0.38
BRF1-208ENST00000546997 KRT19P08727 400 aa17.41■□□□□ 0.38
BRF1-208ENST00000546997 TMEM253P0C7T8 217 aa17.41■□□□□ 0.38
BRF1-208ENST00000546997 CYP2C18P33260 490 aa17.41■□□□□ 0.38
BRF1-208ENST00000546997 AFF1P51825 1210 aaKnown RBP17.41■□□□□ 0.38
BRF1-208ENST00000546997 MFAP3P55082 362 aa17.41■□□□□ 0.38
BRF1-208ENST00000546997 CCL23P55773 120 aa17.41■□□□□ 0.38
BRF1-208ENST00000546997 GRIK3Q13003 919 aa17.41■□□□□ 0.38
BRF1-208ENST00000546997 XKR4Q5GH76 650 aa17.41■□□□□ 0.38
BRF1-208ENST00000546997 PIGWQ7Z7B1 504 aa17.41■□□□□ 0.38
BRF1-208ENST00000546997 SLFN11Q7Z7L1 901 aa17.41■□□□□ 0.38
BRF1-208ENST00000546997 FAM71AQ8IYT1 594 aa17.41■□□□□ 0.38
BRF1-208ENST00000546997 RASGEF1CQ8N431 466 aa17.41■□□□□ 0.38
BRF1-208ENST00000546997 ANKRD27Q96NW4 1050 aa17.41■□□□□ 0.38
BRF1-208ENST00000546997 PCDH10Q9P2E7 1040 aa17.41■□□□□ 0.38
BRF1-208ENST00000546997 MICAL3Q7RTP6 2002 aa17.41■□□□□ 0.38
BRF1-208ENST00000546997 PTGESO14684 152 aa17.4■□□□□ 0.38
BRF1-208ENST00000546997 ALADP13716 330 aa17.4■□□□□ 0.38
BRF1-208ENST00000546997 MLH1P40692 756 aa17.4■□□□□ 0.38
BRF1-208ENST00000546997 ZNF268Q14587 947 aaPredicted RBP17.4■□□□□ 0.38
BRF1-208ENST00000546997 ZBTB6Q15916 424 aa17.4■□□□□ 0.38
BRF1-208ENST00000546997 WDR44Q5JSH3 913 aa17.4■□□□□ 0.38
BRF1-208ENST00000546997 AGMOQ6ZNB7 445 aa17.4■□□□□ 0.38
BRF1-208ENST00000546997 TMC3Q7Z5M5 1100 aa17.4■□□□□ 0.38
BRF1-208ENST00000546997 PALB2Q86YC2 1186 aa17.4■□□□□ 0.38
BRF1-208ENST00000546997 NT5DC4Q86YG4 428 aa17.4■□□□□ 0.38
BRF1-208ENST00000546997 GSTCDQ8NEC7 633 aa17.4■□□□□ 0.38
BRF1-208ENST00000546997 SLC20A1Q8WUM9 679 aa17.4■□□□□ 0.38
BRF1-208ENST00000546997 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.4■□□□□ 0.38
BRF1-208ENST00000546997 DPP3Q9NY33 737 aa17.4■□□□□ 0.38
BRF1-208ENST00000546997 CNOT8Q9UFF9 292 aaKnown RBP17.4■□□□□ 0.38
BRF1-208ENST00000546997 NOVA2Q9UNW9 492 aaKnown RBP17.4■□□□□ 0.38
BRF1-208ENST00000546997 ZNF623O75123 536 aa17.4■□□□□ 0.38
BRF1-208ENST00000546997 PPFIA2O75334 1257 aa17.4■□□□□ 0.38
BRF1-208ENST00000546997 ITGA4P13612 1032 aa17.4■□□□□ 0.38
BRF1-208ENST00000546997 POLR2BP30876 1174 aaKnown RBP17.4■□□□□ 0.38
BRF1-208ENST00000546997 RAB27AP51159 221 aa17.4■□□□□ 0.38
BRF1-208ENST00000546997 GCNT1Q02742 428 aa17.4■□□□□ 0.38
BRF1-208ENST00000546997 TRPC3Q13507 836 aa17.4■□□□□ 0.38
BRF1-208ENST00000546997 SPRED3Q2MJR0 410 aa17.4■□□□□ 0.38
BRF1-208ENST00000546997 TCTN1Q2MV58 587 aa17.4■□□□□ 0.38
BRF1-208ENST00000546997 PLEKHG4Q58EX7 1191 aa17.4■□□□□ 0.38
BRF1-208ENST00000546997 NECAB2Q7Z6G3 386 aa17.4■□□□□ 0.38
BRF1-208ENST00000546997 MRPL10Q7Z7H8 261 aaKnown RBP17.4■□□□□ 0.38
BRF1-208ENST00000546997 RNF169Q8NCN4 708 aa17.4■□□□□ 0.38
BRF1-208ENST00000546997 SHC3Q92529 594 aa17.4■□□□□ 0.38
BRF1-208ENST00000546997 PGM2Q96G03 612 aa17.4■□□□□ 0.38
BRF1-208ENST00000546997 ZNF317Q96PQ6 595 aaPredicted RBP17.4■□□□□ 0.38
BRF1-208ENST00000546997 GAD1Q99259 594 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms