RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 TRMT2BQ96GJ1 504 aaKnown RBP15.42■□□□□ 0.06
COL2A1-209ENST00000546974 ZFYVE19Q96K21 471 aa15.42■□□□□ 0.06
COL2A1-209ENST00000546974 GTSE1Q9NYZ3 720 aa15.42■□□□□ 0.06
COL2A1-209ENST00000546974 CGNQ9P2M7 1197 aaKnown RBP15.42■□□□□ 0.06
COL2A1-209ENST00000546974 MAGED2Q9UNF1 606 aaPredicted RBP15.42■□□□□ 0.06
COL2A1-209ENST00000546974 ANAPC1Q9H1A4 1944 aa15.42■□□□□ 0.06
COL2A1-209ENST00000546974 PTPRDP23468 1912 aa15.41■□□□□ 0.06
COL2A1-209ENST00000546974 CLIC2O15247 247 aa15.41■□□□□ 0.06
COL2A1-209ENST00000546974 TDGF1P13385 188 aa15.41■□□□□ 0.06
COL2A1-209ENST00000546974 CASP1P29466 404 aa15.41■□□□□ 0.06
COL2A1-209ENST00000546974 CTHP32929 405 aa15.41■□□□□ 0.06
COL2A1-209ENST00000546974 AVPR1AP37288 418 aa15.41■□□□□ 0.06
COL2A1-209ENST00000546974 SOX9P48436 509 aa15.41■□□□□ 0.06
COL2A1-209ENST00000546974 CCR3P51677 355 aa15.41■□□□□ 0.06
COL2A1-209ENST00000546974 NRLP54845 237 aa15.41■□□□□ 0.06
COL2A1-209ENST00000546974 DDR2Q16832 855 aa15.41■□□□□ 0.06
COL2A1-209ENST00000546974 BMT2Q1RMZ1 405 aa15.41■□□□□ 0.06
COL2A1-209ENST00000546974 DGKKQ5KSL6 1271 aa15.41■□□□□ 0.06
COL2A1-209ENST00000546974 SDHAF4Q5VUM1 108 aa15.41■□□□□ 0.06
COL2A1-209ENST00000546974 HS2ST1Q7LGA3 356 aa15.41■□□□□ 0.06
COL2A1-209ENST00000546974 MON1AQ86VX9 555 aa15.41■□□□□ 0.06
COL2A1-209ENST00000546974 NELFCDQ8IXH7 590 aa15.41■□□□□ 0.06
COL2A1-209ENST00000546974 MAB21L3Q8N8X9 362 aa15.41■□□□□ 0.06
COL2A1-209ENST00000546974 XXYLT1Q8NBI6 393 aa15.41■□□□□ 0.06
COL2A1-209ENST00000546974 RDH13Q8NBN7 331 aa15.41■□□□□ 0.06
COL2A1-209ENST00000546974 KBTBD7Q8WVZ9 684 aa15.41■□□□□ 0.06
COL2A1-209ENST00000546974 MYRFLQ96LU7 910 aa15.41■□□□□ 0.06
COL2A1-209ENST00000546974 FNBP1Q96RU3 617 aa15.41■□□□□ 0.06
COL2A1-209ENST00000546974 CGRRF1Q99675 332 aa15.41■□□□□ 0.06
COL2A1-209ENST00000546974 SMG9Q9H0W8 520 aaKnown RBP15.41■□□□□ 0.06
COL2A1-209ENST00000546974 BLZF1Q9H2G9 400 aa15.41■□□□□ 0.06
COL2A1-209ENST00000546974 KIF9Q9HAQ2 790 aa15.41■□□□□ 0.06
COL2A1-209ENST00000546974 RCOR1Q9UKL0 485 aa15.41■□□□□ 0.06
COL2A1-209ENST00000546974 CDH9Q9ULB4 789 aa15.41■□□□□ 0.06
COL2A1-209ENST00000546974 HCRTO43612 131 aa15.4■□□□□ 0.06
COL2A1-209ENST00000546974 FAM163BP0C2L3 166 aa15.4■□□□□ 0.06
COL2A1-209ENST00000546974 DLATP10515 647 aaKnown RBP15.4■□□□□ 0.06
COL2A1-209ENST00000546974 TNNI1P19237 187 aa15.4■□□□□ 0.06
COL2A1-209ENST00000546974 WARSP23381 471 aaKnown RBP15.4■□□□□ 0.06
COL2A1-209ENST00000546974 LMO2P25791 158 aa15.4■□□□□ 0.06
COL2A1-209ENST00000546974 MAGEA11P43364 429 aa15.4■□□□□ 0.06
COL2A1-209ENST00000546974 ID4P47928 161 aa15.4■□□□□ 0.06
COL2A1-209ENST00000546974 CXCL12P48061 93 aa15.4■□□□□ 0.06
COL2A1-209ENST00000546974 CYP24A1Q07973 514 aa15.4■□□□□ 0.06
COL2A1-209ENST00000546974 CUL4BQ13620 913 aa15.4■□□□□ 0.06
COL2A1-209ENST00000546974 PKP1Q13835 747 aa15.4■□□□□ 0.06
COL2A1-209ENST00000546974 GAS6Q14393 721 aa15.4■□□□□ 0.06
COL2A1-209ENST00000546974 ZNF268Q14587 947 aaPredicted RBP15.4■□□□□ 0.06
COL2A1-209ENST00000546974 PSMD6Q15008 389 aa15.4■□□□□ 0.06
COL2A1-209ENST00000546974 ITPRIPL2Q3MIP1 535 aa15.4■□□□□ 0.06
COL2A1-209ENST00000546974 TXNDC8Q6A555 127 aa15.4■□□□□ 0.06
COL2A1-209ENST00000546974 TXNDC11Q6PKC3 985 aa15.4■□□□□ 0.06
COL2A1-209ENST00000546974 C4orf50Q6ZRC1 276 aa15.4■□□□□ 0.06
COL2A1-209ENST00000546974 C12orf56Q8IXR9 622 aa15.4■□□□□ 0.06
COL2A1-209ENST00000546974 SPEM1Q8N4L4 309 aa15.4■□□□□ 0.06
COL2A1-209ENST00000546974 TTC8Q8TAM2 541 aa15.4■□□□□ 0.06
COL2A1-209ENST00000546974 USP13Q92995 863 aaPredicted RBP15.4■□□□□ 0.06
COL2A1-209ENST00000546974 HINFPQ9BQA5 517 aa15.4■□□□□ 0.06
COL2A1-209ENST00000546974 FAM83CQ9BQN1 747 aa15.4■□□□□ 0.06
COL2A1-209ENST00000546974 SYT15Q9BQS2 421 aa15.4■□□□□ 0.06
COL2A1-209ENST00000546974 EPC1Q9H2F5 836 aa15.4■□□□□ 0.06
COL2A1-209ENST00000546974 SLC39A2Q9NP94 309 aa15.4■□□□□ 0.06
COL2A1-209ENST00000546974 GKN1Q9NS71 199 aa15.4■□□□□ 0.06
COL2A1-209ENST00000546974 TDP1Q9NUW8 608 aa15.4■□□□□ 0.06
COL2A1-209ENST00000546974 MAGEC2Q9UBF1 373 aaPredicted RBP15.4■□□□□ 0.06
COL2A1-209ENST00000546974 ATP2C2O75185 946 aa15.39■□□□□ 0.05
COL2A1-209ENST00000546974 TADA3O75528 432 aa15.39■□□□□ 0.05
COL2A1-209ENST00000546974 CST3P01034 146 aaPredicted RBP15.39■□□□□ 0.05
COL2A1-209ENST00000546974 AFMP43652 599 aa15.39■□□□□ 0.05
COL2A1-209ENST00000546974 CYP2J2P51589 502 aa15.39■□□□□ 0.05
COL2A1-209ENST00000546974 DNM1Q05193 864 aaKnown RBP15.39■□□□□ 0.05
COL2A1-209ENST00000546974 TNK2Q07912 1038 aa15.39■□□□□ 0.05
COL2A1-209ENST00000546974 MAPRE1Q15691 268 aaKnown RBP15.39■□□□□ 0.05
COL2A1-209ENST00000546974 CCDC142Q17RM4 750 aa15.39■□□□□ 0.05
COL2A1-209ENST00000546974 KNOP1Q1ED39 458 aaKnown RBP15.39■□□□□ 0.05
COL2A1-209ENST00000546974 WDR44Q5JSH3 913 aa15.39■□□□□ 0.05
COL2A1-209ENST00000546974 VSTM1Q6UX27 236 aa15.39■□□□□ 0.05
COL2A1-209ENST00000546974 KIAA2013Q8IYS2 634 aa15.39■□□□□ 0.05
COL2A1-209ENST00000546974 CEP57L1Q8IYX8 460 aa15.39■□□□□ 0.05
COL2A1-209ENST00000546974 SYNPOQ8N3V7 929 aa15.39■□□□□ 0.05
COL2A1-209ENST00000546974 STKLD1Q8NE28 680 aa15.39■□□□□ 0.05
COL2A1-209ENST00000546974 CEP295NLQ96MC4 621 aa15.39■□□□□ 0.05
COL2A1-209ENST00000546974 MMS19Q96T76 1030 aa15.39■□□□□ 0.05
COL2A1-209ENST00000546974 CCL26Q9Y258 94 aa15.39■□□□□ 0.05
COL2A1-209ENST00000546974 TACC1O75410 805 aa15.38■□□□□ 0.05
COL2A1-209ENST00000546974 PAPSS2O95340 614 aaPredicted RBP15.38■□□□□ 0.05
COL2A1-209ENST00000546974 SLFN14P0C7P3 912 aa15.38■□□□□ 0.05
COL2A1-209ENST00000546974 GNL1P36915 607 aaPredicted RBP15.38■□□□□ 0.05
COL2A1-209ENST00000546974 PSMC1P62191 440 aaKnown RBP15.38■□□□□ 0.05
COL2A1-209ENST00000546974 FOXK2Q01167 660 aa15.38■□□□□ 0.05
COL2A1-209ENST00000546974 SATB1Q01826 763 aa15.38■□□□□ 0.05
COL2A1-209ENST00000546974 RUNX3Q13761 415 aa15.38■□□□□ 0.05
COL2A1-209ENST00000546974 CCINQ13939 588 aa15.38■□□□□ 0.05
COL2A1-209ENST00000546974 PON2Q15165 354 aa15.38■□□□□ 0.05
COL2A1-209ENST00000546974 SCN4BQ8IWT1 228 aa15.38■□□□□ 0.05
COL2A1-209ENST00000546974 DCLK2Q8N568 766 aa15.38■□□□□ 0.05
COL2A1-209ENST00000546974 SPRYD3Q8NCJ5 442 aa15.38■□□□□ 0.05
COL2A1-209ENST00000546974 GOLGA5Q8TBA6 731 aa15.38■□□□□ 0.05
COL2A1-209ENST00000546974 MYLPFQ96A32 169 aa15.38■□□□□ 0.05
COL2A1-209ENST00000546974 CCDC127Q96BQ5 260 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms