RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 PHLDB3Q6NSJ2 640 aa15.78■□□□□ 0.12
CCDC38-205ENST00000546947 VSTM1Q6UX27 236 aa15.78■□□□□ 0.12
CCDC38-205ENST00000546947 FLCNQ8NFG4 579 aa15.78■□□□□ 0.12
CCDC38-205ENST00000546947 MYCBPAPQ8TBZ2 947 aa15.78■□□□□ 0.12
CCDC38-205ENST00000546947 ERCC4Q92889 916 aaPredicted RBP15.78■□□□□ 0.12
CCDC38-205ENST00000546947 MYLPFQ96A32 169 aa15.78■□□□□ 0.12
CCDC38-205ENST00000546947 CEP295NLQ96MC4 621 aa15.78■□□□□ 0.12
CCDC38-205ENST00000546947 ARHGEF3Q9NR81 526 aa15.78■□□□□ 0.12
CCDC38-205ENST00000546947 UXTQ9UBK9 157 aaPredicted RBP15.78■□□□□ 0.12
CCDC38-205ENST00000546947 A8MXQ7 604 aa15.77■□□□□ 0.12
CCDC38-205ENST00000546947 TRIM49P0CI25 452 aa15.77■□□□□ 0.12
CCDC38-205ENST00000546947 TRIM49CP0CI26 452 aa15.77■□□□□ 0.12
CCDC38-205ENST00000546947 EPB41P11171 864 aaKnown RBP15.77■□□□□ 0.12
CCDC38-205ENST00000546947 HMGA1P17096 107 aaKnown RBP15.77■□□□□ 0.12
CCDC38-205ENST00000546947 AOC1P19801 751 aa15.77■□□□□ 0.12
CCDC38-205ENST00000546947 RFX1P22670 979 aa15.77■□□□□ 0.12
CCDC38-205ENST00000546947 DDX6P26196 483 aaKnown RBP eCLIP15.77■□□□□ 0.12
CCDC38-205ENST00000546947 WEE1P30291 646 aa15.77■□□□□ 0.12
CCDC38-205ENST00000546947 GTF2H1P32780 548 aa15.77■□□□□ 0.12
CCDC38-205ENST00000546947 PIK3CAP42336 1068 aa15.77■□□□□ 0.12
CCDC38-205ENST00000546947 STARD6P59095 220 aa15.77■□□□□ 0.12
CCDC38-205ENST00000546947 UBE2HP62256 183 aa15.77■□□□□ 0.12
CCDC38-205ENST00000546947 FKBP3Q00688 224 aaKnown RBP15.77■□□□□ 0.12
CCDC38-205ENST00000546947 PRKCQQ04759 706 aa15.77■□□□□ 0.12
CCDC38-205ENST00000546947 LRRC63Q05C16 580 aa15.77■□□□□ 0.12
CCDC38-205ENST00000546947 STIM1Q13586 685 aa15.77■□□□□ 0.12
CCDC38-205ENST00000546947 DDR2Q16832 855 aa15.77■□□□□ 0.12
CCDC38-205ENST00000546947 CCDC142Q17RM4 750 aa15.77■□□□□ 0.12
CCDC38-205ENST00000546947 GPR158Q5T848 1215 aa15.77■□□□□ 0.12
CCDC38-205ENST00000546947 IER5LQ5T953 404 aa15.77■□□□□ 0.12
CCDC38-205ENST00000546947 ZC3H3Q8IXZ2 948 aaKnown RBP15.77■□□□□ 0.12
CCDC38-205ENST00000546947 ADSSL1Q8N142 457 aa15.77■□□□□ 0.12
CCDC38-205ENST00000546947 TMEM105Q8N8V8 129 aa15.77■□□□□ 0.12
CCDC38-205ENST00000546947 TRMT2BQ96GJ1 504 aaKnown RBP15.77■□□□□ 0.12
CCDC38-205ENST00000546947 SHDQ96IW2 340 aa15.77■□□□□ 0.12
CCDC38-205ENST00000546947 TASP1Q9H6P5 420 aa15.77■□□□□ 0.12
CCDC38-205ENST00000546947 MAN1B1Q9UKM7 699 aa15.77■□□□□ 0.12
CCDC38-205ENST00000546947 NME7Q9Y5B8 376 aa15.77■□□□□ 0.12
CCDC38-205ENST00000546947 MIA3Q5JRA6 1907 aa15.76■□□□□ 0.11
CCDC38-205ENST00000546947 SLC38A8A6NNN8 435 aa15.76■□□□□ 0.11
CCDC38-205ENST00000546947 STK25O00506 426 aa15.76■□□□□ 0.11
CCDC38-205ENST00000546947 NOL4O94818 638 aa15.76■□□□□ 0.11
CCDC38-205ENST00000546947 ASS1P00966 412 aaKnown RBP15.76■□□□□ 0.11
CCDC38-205ENST00000546947 HLA-DRAP01903 254 aa15.76■□□□□ 0.11
CCDC38-205ENST00000546947 F11P03951 625 aa15.76■□□□□ 0.11
CCDC38-205ENST00000546947 PSMC3P17980 439 aa15.76■□□□□ 0.11
CCDC38-205ENST00000546947 PTPN1P18031 435 aaKnown RBP15.76■□□□□ 0.11
CCDC38-205ENST00000546947 BDNFP23560 247 aa15.76■□□□□ 0.11
CCDC38-205ENST00000546947 PLA2G5P39877 138 aa15.76■□□□□ 0.11
CCDC38-205ENST00000546947 CYP4F8P98187 520 aa15.76■□□□□ 0.11
CCDC38-205ENST00000546947 CYP27A1Q02318 531 aa15.76■□□□□ 0.11
CCDC38-205ENST00000546947 PPP3CAQ08209 521 aa15.76■□□□□ 0.11
CCDC38-205ENST00000546947 MDH1BQ5I0G3 518 aa15.76■□□□□ 0.11
CCDC38-205ENST00000546947 STXBP5Q5T5C0 1151 aa15.76■□□□□ 0.11
CCDC38-205ENST00000546947 SDHAF4Q5VUM1 108 aa15.76■□□□□ 0.11
CCDC38-205ENST00000546947 ANKRD40Q6AI12 368 aa15.76■□□□□ 0.11
CCDC38-205ENST00000546947 VITQ6UXI7 678 aa15.76■□□□□ 0.11
CCDC38-205ENST00000546947 ARID3BQ8IVW6 561 aaPredicted RBP15.76■□□□□ 0.11
CCDC38-205ENST00000546947 MFSD6LQ8IWD5 586 aa15.76■□□□□ 0.11
CCDC38-205ENST00000546947 SCN4BQ8IWT1 228 aa15.76■□□□□ 0.11
CCDC38-205ENST00000546947 B3GALNT2Q8NCR0 500 aa15.76■□□□□ 0.11
CCDC38-205ENST00000546947 PRSS33Q8NF86 280 aa15.76■□□□□ 0.11
CCDC38-205ENST00000546947 DNASE1L2Q92874 299 aa15.76■□□□□ 0.11
CCDC38-205ENST00000546947 FAM122AQ96E09 287 aa15.76■□□□□ 0.11
CCDC38-205ENST00000546947 PCED1BQ96HM7 432 aa15.76■□□□□ 0.11
CCDC38-205ENST00000546947 SPATA17Q96L03 361 aa15.76■□□□□ 0.11
CCDC38-205ENST00000546947 MYRFLQ96LU7 910 aa15.76■□□□□ 0.11
CCDC38-205ENST00000546947 TRMT61BQ9BVS5 477 aaKnown RBP15.76■□□□□ 0.11
CCDC38-205ENST00000546947 IMPG2Q9BZV3 1241 aa15.76■□□□□ 0.11
CCDC38-205ENST00000546947 DPEP3Q9H4B8 488 aa15.76■□□□□ 0.11
CCDC38-205ENST00000546947 SMYD3Q9H7B4 428 aa15.76■□□□□ 0.11
CCDC38-205ENST00000546947 TBC1D17Q9HA65 648 aa15.76■□□□□ 0.11
CCDC38-205ENST00000546947 TMEM8AQ9HCN3 771 aa15.76■□□□□ 0.11
CCDC38-205ENST00000546947 OBP2AQ9NY56 170 aa15.76■□□□□ 0.11
CCDC38-205ENST00000546947 MAGED2Q9UNF1 606 aaPredicted RBP15.76■□□□□ 0.11
CCDC38-205ENST00000546947 COL4A2P08572 1712 aa15.76■□□□□ 0.11
CCDC38-205ENST00000546947 ANAPC1Q9H1A4 1944 aa15.76■□□□□ 0.11
CCDC38-205ENST00000546947 TICRRQ7Z2Z1 1910 aa15.75■□□□□ 0.11
CCDC38-205ENST00000546947 SOBPA7XYQ1 873 aa15.75■□□□□ 0.11
CCDC38-205ENST00000546947 HEPACAM2A8MVW5 462 aa15.75■□□□□ 0.11
CCDC38-205ENST00000546947 PSMA7O14818 248 aa15.75■□□□□ 0.11
CCDC38-205ENST00000546947 TRIM66O15016 1216 aa15.75■□□□□ 0.11
CCDC38-205ENST00000546947 SLC16A3O15427 465 aaKnown RBP15.75■□□□□ 0.11
CCDC38-205ENST00000546947 STX10O60499 249 aa15.75■□□□□ 0.11
CCDC38-205ENST00000546947 CCNE1P24864 410 aa15.75■□□□□ 0.11
CCDC38-205ENST00000546947 ANXA13P27216 316 aa15.75■□□□□ 0.11
CCDC38-205ENST00000546947 GRIK1P39086 918 aa15.75■□□□□ 0.11
CCDC38-205ENST00000546947 VIPR2P41587 438 aa15.75■□□□□ 0.11
CCDC38-205ENST00000546947 GCLMP48507 274 aa15.75■□□□□ 0.11
CCDC38-205ENST00000546947 PTPN5P54829 565 aa15.75■□□□□ 0.11
CCDC38-205ENST00000546947 CDH8P55286 799 aa15.75■□□□□ 0.11
CCDC38-205ENST00000546947 NLRP12P59046 1061 aa15.75■□□□□ 0.11
CCDC38-205ENST00000546947 GRM2Q14416 872 aa15.75■□□□□ 0.11
CCDC38-205ENST00000546947 MLF2Q15773 248 aaPredicted RBP15.75■□□□□ 0.11
CCDC38-205ENST00000546947 SLC44A4Q53GD3 710 aa15.75■□□□□ 0.11
CCDC38-205ENST00000546947 KRT39Q6A163 491 aa15.75■□□□□ 0.11
CCDC38-205ENST00000546947 SCARA5Q6ZMJ2 495 aa15.75■□□□□ 0.11
CCDC38-205ENST00000546947 TMEM150AQ86TG1 271 aa15.75■□□□□ 0.11
CCDC38-205ENST00000546947 IRF7Q92985 503 aa15.75■□□□□ 0.11
CCDC38-205ENST00000546947 DHTKD1Q96HY7 919 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms