RNA–Protein interactions for RNA: ENST00000546776.5

TROAP-204, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 1,011 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-204ENST00000546776 PLPP4Q5VZY2 271 aa11.91□□□□□ -0.5
TROAP-204ENST00000546776 ARHGAP17Q68EM7 881 aa11.91□□□□□ -0.5
TROAP-204ENST00000546776 OSTM1Q86WC4 334 aa11.91□□□□□ -0.5
TROAP-204ENST00000546776 GPIHBP1Q8IV16 184 aa11.91□□□□□ -0.5
TROAP-204ENST00000546776 TMEM139Q8IV31 216 aa11.91□□□□□ -0.5
TROAP-204ENST00000546776 RNF168Q8IYW5 571 aaPredicted RBP11.91□□□□□ -0.5
TROAP-204ENST00000546776 VPS52Q8N1B4 723 aa11.91□□□□□ -0.5
TROAP-204ENST00000546776 BCL7CQ8WUZ0 217 aaPredicted RBP11.91□□□□□ -0.5
TROAP-204ENST00000546776 TWNKQ96RR1 684 aa11.91□□□□□ -0.5
TROAP-204ENST00000546776 CHP1Q99653 195 aa11.91□□□□□ -0.5
TROAP-204ENST00000546776 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.91□□□□□ -0.5
TROAP-204ENST00000546776 MRPL17Q9NRX2 175 aaKnown RBP11.91□□□□□ -0.5
TROAP-204ENST00000546776 HMGXB4Q9UGU5 601 aa11.91□□□□□ -0.5
TROAP-204ENST00000546776 NOCTQ9UK39 431 aaKnown RBP11.91□□□□□ -0.5
TROAP-204ENST00000546776 PRRC2BQ5JSZ5 2229 aaKnown RBP11.91□□□□□ -0.5
TROAP-204ENST00000546776 MYH10P35580 1976 aa11.9□□□□□ -0.5
TROAP-204ENST00000546776 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.9□□□□□ -0.5
TROAP-204ENST00000546776 SOWAHDA6NJG2 315 aa11.9□□□□□ -0.5
TROAP-204ENST00000546776 FSCN2O14926 492 aa11.9□□□□□ -0.5
TROAP-204ENST00000546776 LSM8O95777 96 aaKnown RBP11.9□□□□□ -0.5
TROAP-204ENST00000546776 EFEMP2O95967 443 aa11.9□□□□□ -0.5
TROAP-204ENST00000546776 PLEKP08567 350 aaPredicted RBP11.9□□□□□ -0.5
TROAP-204ENST00000546776 ACAT1P24752 427 aaKnown RBP11.9□□□□□ -0.5
TROAP-204ENST00000546776 BRD2P25440 801 aaKnown RBP11.9□□□□□ -0.5
TROAP-204ENST00000546776 NDUFV1P49821 464 aa11.9□□□□□ -0.5
TROAP-204ENST00000546776 KRT83P78385 493 aa11.9□□□□□ -0.5
TROAP-204ENST00000546776 CCZ1BP86790 482 aa11.9□□□□□ -0.5
TROAP-204ENST00000546776 CCZ1P86791 482 aaPredicted RBP11.9□□□□□ -0.5
TROAP-204ENST00000546776 ORC1Q13415 861 aa11.9□□□□□ -0.5
TROAP-204ENST00000546776 MRPL58Q14197 206 aaKnown RBP11.9□□□□□ -0.5
TROAP-204ENST00000546776 CNGA2Q16280 664 aa11.9□□□□□ -0.5
TROAP-204ENST00000546776 PSMD5Q16401 504 aa11.9□□□□□ -0.5
TROAP-204ENST00000546776 SLC18A3Q16572 532 aa11.9□□□□□ -0.5
TROAP-204ENST00000546776 NFE2Q16621 373 aaPredicted RBP11.9□□□□□ -0.5
TROAP-204ENST00000546776 LEXMQ3ZCV2 418 aa11.9□□□□□ -0.5
TROAP-204ENST00000546776 C10orf76Q5T2E6 689 aa11.9□□□□□ -0.5
TROAP-204ENST00000546776 C4orf50Q6ZRC1 276 aa11.9□□□□□ -0.5
TROAP-204ENST00000546776 ZNF571Q7Z3V5 609 aaPredicted RBP11.9□□□□□ -0.5
TROAP-204ENST00000546776 RBM23Q86U06 439 aaKnown RBP11.9□□□□□ -0.5
TROAP-204ENST00000546776 GLYCTKQ8IVS8 523 aa11.9□□□□□ -0.5
TROAP-204ENST00000546776 EFHBQ8N7U6 833 aa11.9□□□□□ -0.5
TROAP-204ENST00000546776 MRPL43Q8N983 215 aaKnown RBP11.9□□□□□ -0.5
TROAP-204ENST00000546776 TMEM35BQ8NCS4 154 aa11.9□□□□□ -0.5
TROAP-204ENST00000546776 MSANTD4Q8NCY6 345 aa11.9□□□□□ -0.5
TROAP-204ENST00000546776 MYCBPAPQ8TBZ2 947 aa11.9□□□□□ -0.5
TROAP-204ENST00000546776 SLC20A1Q8WUM9 679 aa11.9□□□□□ -0.5
TROAP-204ENST00000546776 RIN2Q8WYP3 895 aaPredicted RBP11.9□□□□□ -0.5
TROAP-204ENST00000546776 PIK3R5Q8WYR1 880 aa11.9□□□□□ -0.5
TROAP-204ENST00000546776 CYFIP2Q96F07 1278 aa11.9□□□□□ -0.5
TROAP-204ENST00000546776 NOX5Q96PH1 765 aa11.9□□□□□ -0.5
TROAP-204ENST00000546776 MED10Q9BTT4 135 aa11.9□□□□□ -0.5
TROAP-204ENST00000546776 EMILIN2Q9BXX0 1053 aa11.9□□□□□ -0.5
TROAP-204ENST00000546776 ZNF518BQ9C0D4 1074 aa11.9□□□□□ -0.5
TROAP-204ENST00000546776 DPEP3Q9H4B8 488 aa11.9□□□□□ -0.5
TROAP-204ENST00000546776 PLXNA4Q9HCM2 1894 aa11.9□□□□□ -0.5
TROAP-204ENST00000546776 CHST7Q9NS84 486 aa11.9□□□□□ -0.5
TROAP-204ENST00000546776 ADAMTS1Q9UHI8 967 aa11.9□□□□□ -0.5
TROAP-204ENST00000546776 PCDHGC3Q9UN70 934 aa11.9□□□□□ -0.5
TROAP-204ENST00000546776 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.9□□□□□ -0.5
TROAP-204ENST00000546776 BACE2Q9Y5Z0 518 aa11.9□□□□□ -0.5
TROAP-204ENST00000546776 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.89□□□□□ -0.51
TROAP-204ENST00000546776 EIF3CLB5ME19 914 aaKnown RBP11.89□□□□□ -0.51
TROAP-204ENST00000546776 O00370 1275 aa11.89□□□□□ -0.51
TROAP-204ENST00000546776 NDUFA10O95299 355 aa11.89□□□□□ -0.51
TROAP-204ENST00000546776 MMEP08473 750 aa11.89□□□□□ -0.51
TROAP-204ENST00000546776 CTSAP10619 480 aa11.89□□□□□ -0.51
TROAP-204ENST00000546776 CPB1P15086 417 aa11.89□□□□□ -0.51
TROAP-204ENST00000546776 SNX16P57768 344 aa11.89□□□□□ -0.51
TROAP-204ENST00000546776 PSMC1P62191 440 aaKnown RBP11.89□□□□□ -0.51
TROAP-204ENST00000546776 FMO1Q01740 532 aa11.89□□□□□ -0.51
TROAP-204ENST00000546776 CYP27A1Q02318 531 aa11.89□□□□□ -0.51
TROAP-204ENST00000546776 DSG1Q02413 1049 aa11.89□□□□□ -0.51
TROAP-204ENST00000546776 TFF2Q03403 129 aa11.89□□□□□ -0.51
TROAP-204ENST00000546776 ADAM15Q13444 863 aa11.89□□□□□ -0.51
TROAP-204ENST00000546776 COL19A1Q14993 1142 aa11.89□□□□□ -0.51
TROAP-204ENST00000546776 DUSP6Q16828 381 aa11.89□□□□□ -0.51
TROAP-204ENST00000546776 MDH1BQ5I0G3 518 aa11.89□□□□□ -0.51
TROAP-204ENST00000546776 RTP2Q5QGT7 225 aa11.89□□□□□ -0.51
TROAP-204ENST00000546776 LCLAT1Q6UWP7 414 aa11.89□□□□□ -0.51
TROAP-204ENST00000546776 C2orf15Q8WU43 125 aaKnown RBP11.89□□□□□ -0.51
TROAP-204ENST00000546776 DDX1Q92499 740 aaKnown RBP11.89□□□□□ -0.51
TROAP-204ENST00000546776 ZNF830Q96NB3 372 aaPredicted RBP11.89□□□□□ -0.51
TROAP-204ENST00000546776 EIF3CQ99613 913 aaKnown RBP11.89□□□□□ -0.51
TROAP-204ENST00000546776 HNRNPABQ99729 332 aaKnown RBP11.89□□□□□ -0.51
TROAP-204ENST00000546776 ZCWPW1Q9H0M4 648 aa11.89□□□□□ -0.51
TROAP-204ENST00000546776 LHX5Q9H2C1 402 aa11.89□□□□□ -0.51
TROAP-204ENST00000546776 ACP6Q9NPH0 428 aa11.89□□□□□ -0.51
TROAP-204ENST00000546776 FAM49BQ9NUQ9 324 aa11.89□□□□□ -0.51
TROAP-204ENST00000546776 MTRRQ9UBK8 725 aa11.89□□□□□ -0.51
TROAP-204ENST00000546776 TSPAN16Q9UKR8 245 aa11.89□□□□□ -0.51
TROAP-204ENST00000546776 NME7Q9Y5B8 376 aa11.89□□□□□ -0.51
TROAP-204ENST00000546776 EPN1Q9Y6I3 576 aaPredicted RBP11.89□□□□□ -0.51
TROAP-204ENST00000546776 PRUNE2Q8WUY3 3088 aa11.88□□□□□ -0.51
TROAP-204ENST00000546776 A0A087X0T9 212 aa11.88□□□□□ -0.51
TROAP-204ENST00000546776 M0QYV0 167 aa11.88□□□□□ -0.51
TROAP-204ENST00000546776 C2CD2LO14523 706 aa11.88□□□□□ -0.51
TROAP-204ENST00000546776 PER2O15055 1255 aa11.88□□□□□ -0.51
TROAP-204ENST00000546776 CCP110O43303 1012 aa11.88□□□□□ -0.51
TROAP-204ENST00000546776 FAM228BP0C875 321 aa11.88□□□□□ -0.51
TROAP-204ENST00000546776 FAM200BP0CF97 657 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms