RNA–Protein interactions for RNA: ENST00000546361.6

CHERP-203, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHERP, Length 4,173 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-203ENST00000546361 AIPL1Q9NZN9 384 aa12.37□□□□□ -0.43
CHERP-203ENST00000546361 PPARGC1AQ9UBK2 798 aaKnown RBP12.37□□□□□ -0.43
CHERP-203ENST00000546361 SLC12A8A0AV02 714 aa12.36□□□□□ -0.43
CHERP-203ENST00000546361 SPATA31C2B4DYI2 1134 aa12.36□□□□□ -0.43
CHERP-203ENST00000546361 PSMD3O43242 534 aa12.36□□□□□ -0.43
CHERP-203ENST00000546361 TADA3O75528 432 aa12.36□□□□□ -0.43
CHERP-203ENST00000546361 SATB1Q01826 763 aa12.36□□□□□ -0.43
CHERP-203ENST00000546361 PPHLN1Q8NEY8 458 aaKnown RBP12.36□□□□□ -0.43
CHERP-203ENST00000546361 DNAJC7Q99615 494 aa12.36□□□□□ -0.43
CHERP-203ENST00000546361 DUSP9Q99956 384 aaKnown RBP12.36□□□□□ -0.43
CHERP-203ENST00000546361 CNPY3Q9BT09 278 aa12.36□□□□□ -0.43
CHERP-203ENST00000546361 LACRTQ9GZZ8 138 aa12.36□□□□□ -0.43
CHERP-203ENST00000546361 NR2E3Q9Y5X4 410 aa12.36□□□□□ -0.43
CHERP-203ENST00000546361 ANKRD63C9JTQ0 380 aa12.36□□□□□ -0.43
CHERP-203ENST00000546361 PLA2G6O60733 806 aa12.36□□□□□ -0.43
CHERP-203ENST00000546361 PMPCBO75439 489 aa12.36□□□□□ -0.43
CHERP-203ENST00000546361 ZWINTO95229 277 aa12.36□□□□□ -0.43
CHERP-203ENST00000546361 EGFRP00533 1210 aa12.36□□□□□ -0.43
CHERP-203ENST00000546361 ESRRAP11474 423 aaPredicted RBP12.36□□□□□ -0.43
CHERP-203ENST00000546361 AKT1P31749 480 aa12.36□□□□□ -0.43
CHERP-203ENST00000546361 TKTL1P51854 596 aa12.36□□□□□ -0.43
CHERP-203ENST00000546361 JAMLQ86YT9 394 aa12.36□□□□□ -0.43
CHERP-203ENST00000546361 NUDCD3Q8IVD9 361 aa12.36□□□□□ -0.43
CHERP-203ENST00000546361 PDCD7Q8N8D1 485 aaKnown RBP12.36□□□□□ -0.43
CHERP-203ENST00000546361 FAM172AQ8WUF8 416 aa12.36□□□□□ -0.43
CHERP-203ENST00000546361 SLC20A1Q8WUM9 679 aa12.36□□□□□ -0.43
CHERP-203ENST00000546361 RXFP2Q8WXD0 754 aa12.36□□□□□ -0.43
CHERP-203ENST00000546361 PDGFCQ9NRA1 345 aa12.36□□□□□ -0.43
CHERP-203ENST00000546361 HES2Q9Y543 173 aa12.36□□□□□ -0.43
CHERP-203ENST00000546361 NFASCO94856 1347 aa12.36□□□□□ -0.43
CHERP-203ENST00000546361 NDUFS3O75489 264 aa12.36□□□□□ -0.43
CHERP-203ENST00000546361 GLRA2P23416 452 aa12.36□□□□□ -0.43
CHERP-203ENST00000546361 CCL23P55773 120 aa12.36□□□□□ -0.43
CHERP-203ENST00000546361 SESN3P58005 492 aa12.36□□□□□ -0.43
CHERP-203ENST00000546361 STAT4Q14765 748 aa12.36□□□□□ -0.43
CHERP-203ENST00000546361 NAA25Q14CX7 972 aa12.36□□□□□ -0.43
CHERP-203ENST00000546361 HSDL1Q3SXM5 330 aa12.36□□□□□ -0.43
CHERP-203ENST00000546361 ZNF571Q7Z3V5 609 aaPredicted RBP12.36□□□□□ -0.43
CHERP-203ENST00000546361 SLC13A5Q86YT5 568 aaPredicted RBP12.36□□□□□ -0.43
CHERP-203ENST00000546361 SLC25A41Q8N5S1 370 aa12.36□□□□□ -0.43
CHERP-203ENST00000546361 COG1Q8WTW3 980 aa12.36□□□□□ -0.43
CHERP-203ENST00000546361 PBXIP1Q96AQ6 731 aa12.36□□□□□ -0.43
CHERP-203ENST00000546361 SDCCAG3Q96C92 435 aa12.36□□□□□ -0.43
CHERP-203ENST00000546361 INPP4AQ96PE3 977 aaPredicted RBP12.36□□□□□ -0.43
CHERP-203ENST00000546361 HSD17B14Q9BPX1 270 aa12.36□□□□□ -0.43
CHERP-203ENST00000546361 LATS2Q9NRM7 1088 aa12.36□□□□□ -0.43
CHERP-203ENST00000546361 ARHGAP20Q9P2F6 1191 aa12.36□□□□□ -0.43
CHERP-203ENST00000546361 TPX2Q9ULW0 747 aaKnown RBP12.36□□□□□ -0.43
CHERP-203ENST00000546361 ZNF197O14709 1029 aa12.35□□□□□ -0.43
CHERP-203ENST00000546361 FOXP2O15409 715 aa12.35□□□□□ -0.43
CHERP-203ENST00000546361 NUMBP49757 651 aa12.35□□□□□ -0.43
CHERP-203ENST00000546361 EPHB3P54753 998 aa12.35□□□□□ -0.43
CHERP-203ENST00000546361 IKBKEQ14164 716 aa12.35□□□□□ -0.43
CHERP-203ENST00000546361 MTHFD1LQ6UB35 978 aa12.35□□□□□ -0.43
CHERP-203ENST00000546361 SH3BP5LQ7L8J4 393 aa12.35□□□□□ -0.43
CHERP-203ENST00000546361 ABRAQ8N0Z2 381 aa12.35□□□□□ -0.43
CHERP-203ENST00000546361 FAM71DQ8N9W8 422 aa12.35□□□□□ -0.43
CHERP-203ENST00000546361 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.35□□□□□ -0.43
CHERP-203ENST00000546361 KRT35Q92764 455 aa12.35□□□□□ -0.43
CHERP-203ENST00000546361 PACSIN1Q9BY11 444 aa12.35□□□□□ -0.43
CHERP-203ENST00000546361 GPR63Q9BZJ6 419 aa12.35□□□□□ -0.43
CHERP-203ENST00000546361 XPO7Q9UIA9 1087 aaKnown RBP12.35□□□□□ -0.43
CHERP-203ENST00000546361 TSPAN16Q9UKR8 245 aa12.35□□□□□ -0.43
CHERP-203ENST00000546361 CDY2AQ9Y6F7 541 aa12.35□□□□□ -0.43
CHERP-203ENST00000546361 STIP1P31948 543 aaKnown RBP12.35□□□□□ -0.43
CHERP-203ENST00000546361 GYS2P54840 703 aa12.35□□□□□ -0.43
CHERP-203ENST00000546361 E2F4Q16254 413 aa12.35□□□□□ -0.43
CHERP-203ENST00000546361 UGP2Q16851 508 aa12.35□□□□□ -0.43
CHERP-203ENST00000546361 KIF19Q2TAC6 998 aa12.35□□□□□ -0.43
CHERP-203ENST00000546361 SDE2Q6IQ49 451 aa12.35□□□□□ -0.43
CHERP-203ENST00000546361 RASSF3Q86WH2 238 aa12.35□□□□□ -0.43
CHERP-203ENST00000546361 PTPRN2Q92932 1015 aa12.35□□□□□ -0.43
CHERP-203ENST00000546361 CELF4Q9BZC1 486 aaKnown RBP12.35□□□□□ -0.43
CHERP-203ENST00000546361 F5H5T6 163 aa12.35□□□□□ -0.43
CHERP-203ENST00000546361 GOLGA8RI6L899 631 aa12.35□□□□□ -0.43
CHERP-203ENST00000546361 SETSIPP0DME0 302 aa12.35□□□□□ -0.43
CHERP-203ENST00000546361 PTGER2P43116 358 aa12.35□□□□□ -0.43
CHERP-203ENST00000546361 BST2Q10589 180 aaKnown RBP12.35□□□□□ -0.43
CHERP-203ENST00000546361 GLIS3Q8NEA6 775 aa12.35□□□□□ -0.43
CHERP-203ENST00000546361 CHMP2BQ9UQN3 213 aa12.35□□□□□ -0.43
CHERP-203ENST00000546361 APOBEC2Q9Y235 224 aaKnown RBP12.35□□□□□ -0.43
CHERP-203ENST00000546361 PCDHB5Q9Y5E4 795 aa12.35□□□□□ -0.43
CHERP-203ENST00000546361 TTLL13PA6NNM8 815 aa12.34□□□□□ -0.43
CHERP-203ENST00000546361 FBXO21O94952 628 aa12.34□□□□□ -0.43
CHERP-203ENST00000546361 ELNP15502 786 aa12.34□□□□□ -0.43
CHERP-203ENST00000546361 FUT2Q10981 343 aa12.34□□□□□ -0.43
CHERP-203ENST00000546361 IMPG1Q17R60 797 aa12.34□□□□□ -0.43
CHERP-203ENST00000546361 COBLL1Q53SF7 1204 aa12.34□□□□□ -0.43
CHERP-203ENST00000546361 FAM133BQ5BKY9 247 aaKnown RBP12.34□□□□□ -0.43
CHERP-203ENST00000546361 ANGPTL8Q6UXH0 198 aa12.34□□□□□ -0.43
CHERP-203ENST00000546361 PLPPR4Q7Z2D5 763 aa12.34□□□□□ -0.43
CHERP-203ENST00000546361 SLFN11Q7Z7L1 901 aa12.34□□□□□ -0.43
CHERP-203ENST00000546361 DDX42Q86XP3 938 aaKnown RBP eCLIP12.34□□□□□ -0.43
CHERP-203ENST00000546361 USP38Q8NB14 1042 aa12.34□□□□□ -0.43
CHERP-203ENST00000546361 DDI1Q8WTU0 396 aa12.34□□□□□ -0.43
CHERP-203ENST00000546361 CAPNS2Q96L46 248 aa12.34□□□□□ -0.43
CHERP-203ENST00000546361 DEFB118Q96PH6 123 aa12.34□□□□□ -0.43
CHERP-203ENST00000546361 MRPL9Q9BYD2 267 aaKnown RBP12.34□□□□□ -0.43
CHERP-203ENST00000546361 GPATCH2LQ9NWQ4 482 aa12.34□□□□□ -0.43
CHERP-203ENST00000546361 EPS15L1Q9UBC2 864 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms