RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 B4GALT3O60512 393 aa20.55■□□□□ 0.88
SKP2-208ENST00000546211 PFKMP08237 780 aa20.55■□□□□ 0.88
SKP2-208ENST00000546211 COMTP21964 271 aa20.55■□□□□ 0.88
SKP2-208ENST00000546211 GABRB2P47870 512 aa20.55■□□□□ 0.88
SKP2-208ENST00000546211 BCAT1P54687 386 aa20.55■□□□□ 0.88
SKP2-208ENST00000546211 GSCP56915 257 aaPredicted RBP20.55■□□□□ 0.88
SKP2-208ENST00000546211 SNX16P57768 344 aa20.55■□□□□ 0.88
SKP2-208ENST00000546211 BST2Q10589 180 aaKnown RBP20.55■□□□□ 0.88
SKP2-208ENST00000546211 ZNF268Q14587 947 aaPredicted RBP20.55■□□□□ 0.88
SKP2-208ENST00000546211 PKDCCQ504Y2 493 aa20.55■□□□□ 0.88
SKP2-208ENST00000546211 CCDC181Q5TID7 509 aa20.55■□□□□ 0.88
SKP2-208ENST00000546211 CRIPAKQ8N1N5 446 aa20.55■□□□□ 0.88
SKP2-208ENST00000546211 SLC2A14Q8TDB8 520 aa20.55■□□□□ 0.88
SKP2-208ENST00000546211 COG1Q8WTW3 980 aa20.55■□□□□ 0.88
SKP2-208ENST00000546211 PBKQ96KB5 322 aa20.55■□□□□ 0.88
SKP2-208ENST00000546211 SYT15Q9BQS2 421 aa20.55■□□□□ 0.88
SKP2-208ENST00000546211 SELENOOQ9BVL4 669 aa20.55■□□□□ 0.88
SKP2-208ENST00000546211 CDH9Q9ULB4 789 aa20.55■□□□□ 0.88
SKP2-208ENST00000546211 CTAGE15A4D2H0 777 aa20.54■□□□□ 0.88
SKP2-208ENST00000546211 CES2O00748 559 aa20.54■□□□□ 0.88
SKP2-208ENST00000546211 KIAA0355O15063 1070 aa20.54■□□□□ 0.88
SKP2-208ENST00000546211 TRAPPC3O43617 180 aa20.54■□□□□ 0.88
SKP2-208ENST00000546211 ERBB2P04626 1255 aa20.54■□□□□ 0.88
SKP2-208ENST00000546211 ITGB1P05556 798 aa20.54■□□□□ 0.88
SKP2-208ENST00000546211 CTAGE8P0CG41 777 aa20.54■□□□□ 0.88
SKP2-208ENST00000546211 RAG1P15918 1043 aa20.54■□□□□ 0.88
SKP2-208ENST00000546211 TYMPP19971 482 aa20.54■□□□□ 0.88
SKP2-208ENST00000546211 GATMP50440 423 aa20.54■□□□□ 0.88
SKP2-208ENST00000546211 DCUN1D2Q6PH85 259 aa20.54■□□□□ 0.88
SKP2-208ENST00000546211 CTAGE6Q86UF2 777 aa20.54■□□□□ 0.88
SKP2-208ENST00000546211 XYLT1Q86Y38 959 aa20.54■□□□□ 0.88
SKP2-208ENST00000546211 CTAGE4Q8IX94 777 aa20.54■□□□□ 0.88
SKP2-208ENST00000546211 UBL4BQ8N7F7 174 aa20.54■□□□□ 0.88
SKP2-208ENST00000546211 STK32AQ8WU08 396 aa20.54■□□□□ 0.88
SKP2-208ENST00000546211 HNRNPABQ99729 332 aaKnown RBP20.54■□□□□ 0.88
SKP2-208ENST00000546211 MCOLN1Q9GZU1 580 aa20.54■□□□□ 0.88
SKP2-208ENST00000546211 RNF14Q9UBS8 474 aa20.54■□□□□ 0.88
SKP2-208ENST00000546211 DNAJB4Q9UDY4 337 aa20.54■□□□□ 0.88
SKP2-208ENST00000546211 PCDHB8Q9UN66 801 aa20.54■□□□□ 0.88
SKP2-208ENST00000546211 PRG3Q9Y2Y8 225 aaPredicted RBP20.54■□□□□ 0.88
SKP2-208ENST00000546211 TCRBV5S1A1TA0A578 114 aa20.53■□□□□ 0.88
SKP2-208ENST00000546211 TRIM43BA6NCK2 446 aa20.53■□□□□ 0.88
SKP2-208ENST00000546211 TBKBP1A7MCY6 615 aa20.53■□□□□ 0.88
SKP2-208ENST00000546211 GOLGA8SH3BPF8 625 aa20.53■□□□□ 0.88
SKP2-208ENST00000546211 CTIFO43310 598 aaKnown RBP20.53■□□□□ 0.88
SKP2-208ENST00000546211 ATP2C2O75185 946 aa20.53■□□□□ 0.88
SKP2-208ENST00000546211 CAPN15O75808 1086 aa20.53■□□□□ 0.88
SKP2-208ENST00000546211 PROSCO94903 275 aa20.53■□□□□ 0.88
SKP2-208ENST00000546211 SLC1A1P43005 524 aa20.53■□□□□ 0.88
SKP2-208ENST00000546211 PAFAH1B1P43034 410 aa20.53■□□□□ 0.88
SKP2-208ENST00000546211 SLC8A3P57103 927 aa20.53■□□□□ 0.88
SKP2-208ENST00000546211 PDE4CQ08493 712 aa20.53■□□□□ 0.88
SKP2-208ENST00000546211 MDH1BQ5I0G3 518 aa20.53■□□□□ 0.88
SKP2-208ENST00000546211 CREG2Q8IUH2 290 aa20.53■□□□□ 0.88
SKP2-208ENST00000546211 THEM5Q8N1Q8 247 aa20.53■□□□□ 0.88
SKP2-208ENST00000546211 SLC35F5Q8WV83 523 aa20.53■□□□□ 0.88
SKP2-208ENST00000546211 TRIM43Q96BQ3 446 aaPredicted RBP20.53■□□□□ 0.88
SKP2-208ENST00000546211 MED10Q9BTT4 135 aa20.53■□□□□ 0.88
SKP2-208ENST00000546211 TRIM7Q9C029 511 aa20.53■□□□□ 0.88
SKP2-208ENST00000546211 NRDE2Q9H7Z3 1164 aa20.53■□□□□ 0.88
SKP2-208ENST00000546211 PRDM10Q9NQV6 1147 aa20.53■□□□□ 0.88
SKP2-208ENST00000546211 TJP2Q9UDY2 1190 aa20.53■□□□□ 0.88
SKP2-208ENST00000546211 IP6K2Q9UHH9 426 aa20.53■□□□□ 0.88
SKP2-208ENST00000546211 TMEM191CA6NGB0 347 aa20.52■□□□□ 0.88
SKP2-208ENST00000546211 EFCAB8A8MWE9 144 aa20.52■□□□□ 0.88
SKP2-208ENST00000546211 F8W810 466 aa20.52■□□□□ 0.88
SKP2-208ENST00000546211 TADA2AO75478 443 aa20.52■□□□□ 0.88
SKP2-208ENST00000546211 PPP1R15BQ5SWA1 713 aa20.52■□□□□ 0.88
SKP2-208ENST00000546211 OVOS1Q6IE37 1185 aa20.52■□□□□ 0.88
SKP2-208ENST00000546211 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.52■□□□□ 0.88
SKP2-208ENST00000546211 TMEM199Q8N511 208 aa20.52■□□□□ 0.88
SKP2-208ENST00000546211 LRRN4CLQ8ND94 238 aa20.52■□□□□ 0.88
SKP2-208ENST00000546211 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.52■□□□□ 0.88
SKP2-208ENST00000546211 MCEEQ96PE7 176 aa20.52■□□□□ 0.88
SKP2-208ENST00000546211 ACBD6Q9BR61 282 aa20.52■□□□□ 0.88
SKP2-208ENST00000546211 COLEC11Q9BWP8 271 aa20.52■□□□□ 0.88
SKP2-208ENST00000546211 TET1Q8NFU7 2136 aa20.52■□□□□ 0.87
SKP2-208ENST00000546211 ABHD14A-ACY1A0A1B0GW23 586 aa20.51■□□□□ 0.87
SKP2-208ENST00000546211 SIGLEC16A6NMB1 481 aa20.51■□□□□ 0.87
SKP2-208ENST00000546211 DDX3YO15523 660 aaKnown RBP20.51■□□□□ 0.87
SKP2-208ENST00000546211 GJB6O95452 261 aa20.51■□□□□ 0.87
SKP2-208ENST00000546211 ALDH2P05091 517 aa20.51■□□□□ 0.87
SKP2-208ENST00000546211 KRT3P12035 628 aa20.51■□□□□ 0.87
SKP2-208ENST00000546211 RGS7P49802 495 aa20.51■□□□□ 0.87
SKP2-208ENST00000546211 CFAP221Q4G0U5 840 aa20.51■□□□□ 0.87
SKP2-208ENST00000546211 KIAA0319Q5VV43 1072 aa20.51■□□□□ 0.87
SKP2-208ENST00000546211 PMF1Q6P1K2 205 aa20.51■□□□□ 0.87
SKP2-208ENST00000546211 FUKQ8N0W3 1084 aa20.51■□□□□ 0.87
SKP2-208ENST00000546211 LRRC43Q8N309 656 aa20.51■□□□□ 0.87
SKP2-208ENST00000546211 GOLGA1Q92805 767 aa20.51■□□□□ 0.87
SKP2-208ENST00000546211 MCRS1Q96EZ8 462 aa20.51■□□□□ 0.87
SKP2-208ENST00000546211 RPGRIP1Q96KN7 1286 aa20.51■□□□□ 0.87
SKP2-208ENST00000546211 SLC4A5Q9BY07 1137 aa20.51■□□□□ 0.87
SKP2-208ENST00000546211 CRTAC1Q9NQ79 661 aa20.51■□□□□ 0.87
SKP2-208ENST00000546211 CCDC66A2RUB6 948 aa20.51■□□□□ 0.87
SKP2-208ENST00000546211 E5RJQ4 531 aa20.51■□□□□ 0.87
SKP2-208ENST00000546211 NRP1O14786 923 aa20.51■□□□□ 0.87
SKP2-208ENST00000546211 TADA3O75528 432 aa20.51■□□□□ 0.87
SKP2-208ENST00000546211 UPP2O95045 317 aa20.51■□□□□ 0.87
SKP2-208ENST00000546211 TKTP29401 623 aaKnown RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms