RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 OPRD1P41143 372 aa15.89■□□□□ 0.13
RTN3-214ENST00000545432 P2RY2P41231 377 aa15.89■□□□□ 0.13
RTN3-214ENST00000545432 TAF6P49848 677 aa15.89■□□□□ 0.13
RTN3-214ENST00000545432 CRY1Q16526 586 aa15.89■□□□□ 0.13
RTN3-214ENST00000545432 WSCD1Q658N2 575 aa15.89■□□□□ 0.13
RTN3-214ENST00000545432 SLC39A4Q6P5W5 647 aa15.89■□□□□ 0.13
RTN3-214ENST00000545432 SLC23A3Q6PIS1 610 aa15.89■□□□□ 0.13
RTN3-214ENST00000545432 METTL23Q86XA0 190 aa15.89■□□□□ 0.13
RTN3-214ENST00000545432 FIZ1Q96SL8 496 aa15.89■□□□□ 0.13
RTN3-214ENST00000545432 LLPHQ9BRT6 129 aaKnown RBP15.89■□□□□ 0.13
RTN3-214ENST00000545432 ABCB6Q9NP58 842 aa15.89■□□□□ 0.13
RTN3-214ENST00000545432 UXTQ9UBK9 157 aaPredicted RBP15.89■□□□□ 0.13
RTN3-214ENST00000545432 INVSQ9Y283 1065 aa15.89■□□□□ 0.13
RTN3-214ENST00000545432 PCDHB6Q9Y5E3 794 aa15.89■□□□□ 0.13
RTN3-214ENST00000545432 PCDHB5Q9Y5E4 795 aa15.89■□□□□ 0.13
RTN3-214ENST00000545432 STYXL1Q9Y6J8 313 aa15.89■□□□□ 0.13
RTN3-214ENST00000545432 TSC2P49815 1807 aa15.89■□□□□ 0.13
RTN3-214ENST00000545432 SCN1AP35498 2009 aa15.89■□□□□ 0.13
RTN3-214ENST00000545432 H0Y626 953 aa15.88■□□□□ 0.13
RTN3-214ENST00000545432 TRIM16O95361 564 aa15.88■□□□□ 0.13
RTN3-214ENST00000545432 NFICP08651 508 aa15.88■□□□□ 0.13
RTN3-214ENST00000545432 HNRNPLP14866 589 aaKnown RBP eCLIP15.88■□□□□ 0.132e-12■■■□□ 15.2
RTN3-214ENST00000545432 LIG4P49917 911 aa15.88■□□□□ 0.13
RTN3-214ENST00000545432 ZNF131P52739 623 aa15.88■□□□□ 0.13
RTN3-214ENST00000545432 MRPS21P82921 87 aaKnown RBP15.88■□□□□ 0.13
RTN3-214ENST00000545432 NR1H3Q13133 447 aa15.88■□□□□ 0.13
RTN3-214ENST00000545432 NFE2Q16621 373 aaPredicted RBP15.88■□□□□ 0.13
RTN3-214ENST00000545432 SYT12Q8IV01 421 aa15.88■□□□□ 0.13
RTN3-214ENST00000545432 MDGA1Q8NFP4 955 aa15.88■□□□□ 0.13
RTN3-214ENST00000545432 FNBP1Q96RU3 617 aa15.88■□□□□ 0.13
RTN3-214ENST00000545432 SLC22A12Q96S37 553 aa15.88■□□□□ 0.13
RTN3-214ENST00000545432 CYP2S1Q96SQ9 504 aa15.88■□□□□ 0.13
RTN3-214ENST00000545432 PKMYT1Q99640 499 aa15.88■□□□□ 0.13
RTN3-214ENST00000545432 TPSD1Q9BZJ3 242 aa15.88■□□□□ 0.13
RTN3-214ENST00000545432 LINC00597Q9H2U6 94 aa15.88■□□□□ 0.13
RTN3-214ENST00000545432 SLC32A1Q9H598 525 aa15.88■□□□□ 0.13
RTN3-214ENST00000545432 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.88■□□□□ 0.13
RTN3-214ENST00000545432 TMEM74BQ9NUR3 256 aa15.88■□□□□ 0.13
RTN3-214ENST00000545432 ABI2Q9NYB9 513 aaPredicted RBP15.88■□□□□ 0.13
RTN3-214ENST00000545432 KLK13Q9UKR3 277 aa15.88■□□□□ 0.13
RTN3-214ENST00000545432 ODF2LQ9ULJ1 636 aa15.88■□□□□ 0.13
RTN3-214ENST00000545432 NOL7Q9UMY1 257 aaKnown RBP15.88■□□□□ 0.13
RTN3-214ENST00000545432 THADAQ6YHU6 1953 aa15.87■□□□□ 0.13
RTN3-214ENST00000545432 KIAA1549LQ6ZVL6 1849 aa15.87■□□□□ 0.13
RTN3-214ENST00000545432 USP17L7P0C7H9 530 aa15.87■□□□□ 0.13
RTN3-214ENST00000545432 HOXD12P35452 270 aa15.87■□□□□ 0.13
RTN3-214ENST00000545432 DPP6P42658 865 aa15.87■□□□□ 0.13
RTN3-214ENST00000545432 MATR3P43243 847 aaKnown RBP eCLIP15.87■□□□□ 0.131e-6■■□□□ 13.3
RTN3-214ENST00000545432 GPR15P49685 360 aa15.87■□□□□ 0.13
RTN3-214ENST00000545432 RAD51AP2Q09MP3 1159 aa15.87■□□□□ 0.13
RTN3-214ENST00000545432 TMEM132DQ14C87 1099 aa15.87■□□□□ 0.13
RTN3-214ENST00000545432 HSF5Q4G112 596 aaPredicted RBP15.87■□□□□ 0.13
RTN3-214ENST00000545432 TRIM61Q5EBN2 209 aa15.87■□□□□ 0.13
RTN3-214ENST00000545432 TMEM92Q6UXU6 159 aa15.87■□□□□ 0.13
RTN3-214ENST00000545432 DTHD1Q6ZMT9 781 aa15.87■□□□□ 0.13
RTN3-214ENST00000545432 PROSER1Q86XN7 944 aa15.87■□□□□ 0.13
RTN3-214ENST00000545432 LRRC15Q8TF66 581 aa15.87■□□□□ 0.13
RTN3-214ENST00000545432 ACBD6Q9BR61 282 aa15.87■□□□□ 0.13
RTN3-214ENST00000545432 PYM1Q9BRP8 204 aaKnown RBP15.87■□□□□ 0.13
RTN3-214ENST00000545432 ARHGAP26Q9UNA1 814 aa15.87■□□□□ 0.13
RTN3-214ENST00000545432 WNT6Q9Y6F9 365 aa15.87■□□□□ 0.13
RTN3-214ENST00000545432 LAMA5O15230 3695 aa15.87■□□□□ 0.13
RTN3-214ENST00000545432 DSPP15924 2871 aaKnown RBP15.86■□□□□ 0.13
RTN3-214ENST00000545432 PTPRDP23468 1912 aa15.86■□□□□ 0.13
RTN3-214ENST00000545432 ANTXRLA6NF34 631 aa15.86■□□□□ 0.13
RTN3-214ENST00000545432 KPNA7A9QM74 516 aa15.86■□□□□ 0.13
RTN3-214ENST00000545432 HNRNPDLO14979 420 aaKnown RBP15.86■□□□□ 0.13
RTN3-214ENST00000545432 PRPF40AO75400 957 aaKnown RBP15.86■□□□□ 0.13
RTN3-214ENST00000545432 PLA2G4BP0C869 781 aa15.86■□□□□ 0.13
RTN3-214ENST00000545432 PFKLP17858 780 aa15.86■□□□□ 0.13
RTN3-214ENST00000545432 IFNAR2P48551 515 aa15.86■□□□□ 0.13
RTN3-214ENST00000545432 CDR1P51861 262 aa15.86■□□□□ 0.13
RTN3-214ENST00000545432 RPL10AP62906 217 aaKnown RBP15.86■□□□□ 0.13
RTN3-214ENST00000545432 ZXDBP98169 803 aa15.86■□□□□ 0.13
RTN3-214ENST00000545432 GTF2BQ00403 316 aa15.86■□□□□ 0.13
RTN3-214ENST00000545432 TMEM119Q4V9L6 283 aa15.86■□□□□ 0.13
RTN3-214ENST00000545432 ANO7Q6IWH7 933 aa15.86■□□□□ 0.13
RTN3-214ENST00000545432 NT5DC4Q86YG4 428 aa15.86■□□□□ 0.13
RTN3-214ENST00000545432 EFCAB13Q8IY85 973 aa15.86■□□□□ 0.13
RTN3-214ENST00000545432 PIGKQ92643 395 aa15.86■□□□□ 0.13
RTN3-214ENST00000545432 BICD1Q96G01 975 aa15.86■□□□□ 0.13
RTN3-214ENST00000545432 NUSAP1Q9BXS6 441 aaKnown RBP15.86■□□□□ 0.13
RTN3-214ENST00000545432 DPP3Q9NY33 737 aa15.86■□□□□ 0.13
RTN3-214ENST00000545432 MBD1Q9UIS9 605 aaPredicted RBP15.86■□□□□ 0.13
RTN3-214ENST00000545432 PILRBQ9UKJ0 227 aa15.86■□□□□ 0.13
RTN3-214ENST00000545432 PI4KAP42356 2102 aa15.86■□□□□ 0.13
RTN3-214ENST00000545432 OBSL1O75147 1896 aa15.85■□□□□ 0.13
RTN3-214ENST00000545432 MYO16Q9Y6X6 1858 aa15.85■□□□□ 0.13
RTN3-214ENST00000545432 TRAV19A0A0A6YYK7 116 aa15.85■□□□□ 0.13
RTN3-214ENST00000545432 NPHP3-ACAD11A0A0J9YXS1 232 aa15.85■□□□□ 0.13
RTN3-214ENST00000545432 ENGP17813 658 aa15.85■□□□□ 0.13
RTN3-214ENST00000545432 DHPSP49366 369 aaPredicted RBP15.85■□□□□ 0.13
RTN3-214ENST00000545432 PSMD2Q13200 908 aa15.85■□□□□ 0.13
RTN3-214ENST00000545432 DDR2Q16832 855 aa15.85■□□□□ 0.13
RTN3-214ENST00000545432 MAP7D1Q3KQU3 841 aa15.85■□□□□ 0.13
RTN3-214ENST00000545432 UAP1L1Q3KQV9 507 aa15.85■□□□□ 0.13
RTN3-214ENST00000545432 CFAP221Q4G0U5 840 aa15.85■□□□□ 0.13
RTN3-214ENST00000545432 CRELD2Q6UXH1 353 aaPredicted RBP15.85■□□□□ 0.13
RTN3-214ENST00000545432 LPCAT2Q7L5N7 544 aa15.85■□□□□ 0.13
RTN3-214ENST00000545432 RAB44Q7Z6P3 723 aaPredicted RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms