RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 ASB3Q9Y575 518 aa12.49□□□□□ -0.41
SNHG1-221ENST00000544983 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.49□□□□□ -0.41
SNHG1-221ENST00000544983 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.48□□□□□ -0.41
SNHG1-221ENST00000544983 TRIM66O15016 1216 aa12.48□□□□□ -0.41
SNHG1-221ENST00000544983 MED7O43513 233 aa12.48□□□□□ -0.41
SNHG1-221ENST00000544983 ATP2C2O75185 946 aa12.48□□□□□ -0.41
SNHG1-221ENST00000544983 GLP2RO95838 553 aa12.48□□□□□ -0.41
SNHG1-221ENST00000544983 LRG1P02750 347 aa12.48□□□□□ -0.41
SNHG1-221ENST00000544983 C8AP07357 584 aa12.48□□□□□ -0.41
SNHG1-221ENST00000544983 OR4Q2P0C623 313 aa12.48□□□□□ -0.41
SNHG1-221ENST00000544983 HAPLN1P10915 354 aaPredicted RBP12.48□□□□□ -0.41
SNHG1-221ENST00000544983 KRT5P13647 590 aa12.48□□□□□ -0.41
SNHG1-221ENST00000544983 EPCAMP16422 314 aa12.48□□□□□ -0.41
SNHG1-221ENST00000544983 EPHB3P54753 998 aa12.48□□□□□ -0.41
SNHG1-221ENST00000544983 POLR2FP61218 127 aaKnown RBP12.48□□□□□ -0.41
SNHG1-221ENST00000544983 CYP27A1Q02318 531 aa12.48□□□□□ -0.41
SNHG1-221ENST00000544983 PTK2Q05397 1052 aa12.48□□□□□ -0.41
SNHG1-221ENST00000544983 RAPGEF1Q13905 1077 aa12.48□□□□□ -0.41
SNHG1-221ENST00000544983 TRIM14Q14142 442 aa12.48□□□□□ -0.41
SNHG1-221ENST00000544983 ARHGAP44Q17R89 818 aa12.48□□□□□ -0.41
SNHG1-221ENST00000544983 PPM1LQ5SGD2 360 aa12.48□□□□□ -0.41
SNHG1-221ENST00000544983 SPECC1LQ69YQ0 1117 aa12.48□□□□□ -0.41
SNHG1-221ENST00000544983 ANKRD54Q6NXT1 300 aa12.48□□□□□ -0.41
SNHG1-221ENST00000544983 LLGL2Q6P1M3 1020 aa12.48□□□□□ -0.41
SNHG1-221ENST00000544983 ITIH5Q86UX2 942 aa12.48□□□□□ -0.41
SNHG1-221ENST00000544983 ELMOD1Q8N336 334 aa12.48□□□□□ -0.41
SNHG1-221ENST00000544983 ATAD1Q8NBU5 361 aa12.48□□□□□ -0.41
SNHG1-221ENST00000544983 SLC7A14Q8TBB6 771 aa12.48□□□□□ -0.41
SNHG1-221ENST00000544983 KAT5Q92993 513 aa12.48□□□□□ -0.41
SNHG1-221ENST00000544983 HLA-CQ95604 372 aa12.48□□□□□ -0.41
SNHG1-221ENST00000544983 CYFIP2Q96F07 1278 aa12.48□□□□□ -0.41
SNHG1-221ENST00000544983 SMARCD1Q96GM5 515 aa12.48□□□□□ -0.41
SNHG1-221ENST00000544983 DPEP3Q9H4B8 488 aa12.48□□□□□ -0.41
SNHG1-221ENST00000544983 PNPLA8Q9NP80 782 aa12.48□□□□□ -0.41
SNHG1-221ENST00000544983 CLDND1Q9NY35 253 aa12.48□□□□□ -0.41
SNHG1-221ENST00000544983 ABI2Q9NYB9 513 aaPredicted RBP12.48□□□□□ -0.41
SNHG1-221ENST00000544983 HMGXB4Q9UGU5 601 aa12.48□□□□□ -0.41
SNHG1-221ENST00000544983 NME7Q9Y5B8 376 aa12.48□□□□□ -0.41
SNHG1-221ENST00000544983 INSL5Q9Y5Q6 135 aa12.48□□□□□ -0.41
SNHG1-221ENST00000544983 FHOD1Q9Y613 1164 aa12.48□□□□□ -0.41
SNHG1-221ENST00000544983 A0A1W2PQJ5 194 aa12.47□□□□□ -0.41
SNHG1-221ENST00000544983 F8VZ95 297 aa12.47□□□□□ -0.41
SNHG1-221ENST00000544983 FOXN3O00409 490 aaPredicted RBP12.47□□□□□ -0.41
SNHG1-221ENST00000544983 TPM1P09493 284 aa12.47□□□□□ -0.41
SNHG1-221ENST00000544983 FAM200BP0CF97 657 aa12.47□□□□□ -0.41
SNHG1-221ENST00000544983 GTF2F1P35269 517 aaKnown RBP eCLIP12.47□□□□□ -0.41
SNHG1-221ENST00000544983 USP8P40818 1118 aa12.47□□□□□ -0.41
SNHG1-221ENST00000544983 STAT1P42224 750 aa12.47□□□□□ -0.41
SNHG1-221ENST00000544983 JAM2P57087 298 aa12.47□□□□□ -0.41
SNHG1-221ENST00000544983 PLCB2Q00722 1185 aa12.47□□□□□ -0.41
SNHG1-221ENST00000544983 VEPH1Q14D04 833 aa12.47□□□□□ -0.41
SNHG1-221ENST00000544983 SKIV2LQ15477 1246 aaKnown RBP12.47□□□□□ -0.41
SNHG1-221ENST00000544983 CNGA2Q16280 664 aa12.47□□□□□ -0.41
SNHG1-221ENST00000544983 PUS10Q3MIT2 529 aaKnown RBP12.47□□□□□ -0.41
SNHG1-221ENST00000544983 MGAT5BQ3V5L5 792 aa12.47□□□□□ -0.41
SNHG1-221ENST00000544983 ZNF394Q53GI3 561 aa12.47□□□□□ -0.41
SNHG1-221ENST00000544983 CES5AQ6NT32 575 aa12.47□□□□□ -0.41
SNHG1-221ENST00000544983 GJB7Q6PEY0 223 aa12.47□□□□□ -0.41
SNHG1-221ENST00000544983 FUKQ8N0W3 1084 aa12.47□□□□□ -0.41
SNHG1-221ENST00000544983 C12orf29Q8N999 325 aa12.47□□□□□ -0.41
SNHG1-221ENST00000544983 LEMD2Q8NC56 503 aa12.47□□□□□ -0.41
SNHG1-221ENST00000544983 VN1R2Q8NFZ6 395 aa12.47□□□□□ -0.41
SNHG1-221ENST00000544983 MYLPFQ96A32 169 aa12.47□□□□□ -0.41
SNHG1-221ENST00000544983 MRFAP1L1Q96HT8 127 aa12.47□□□□□ -0.41
SNHG1-221ENST00000544983 SPATA17Q96L03 361 aa12.47□□□□□ -0.41
SNHG1-221ENST00000544983 C8orf48Q96LL4 319 aa12.47□□□□□ -0.41
SNHG1-221ENST00000544983 PGLYRP2Q96PD5 576 aa12.47□□□□□ -0.41
SNHG1-221ENST00000544983 TWNKQ96RR1 684 aa12.47□□□□□ -0.41
SNHG1-221ENST00000544983 MED10Q9BTT4 135 aa12.47□□□□□ -0.41
SNHG1-221ENST00000544983 B3GNT5Q9BYG0 378 aa12.47□□□□□ -0.41
SNHG1-221ENST00000544983 PRKD2Q9BZL6 878 aa12.47□□□□□ -0.41
SNHG1-221ENST00000544983 UBXN6Q9BZV1 441 aa12.47□□□□□ -0.41
SNHG1-221ENST00000544983 UBE2ZQ9H832 354 aaPredicted RBP12.47□□□□□ -0.41
SNHG1-221ENST00000544983 DMAP1Q9NPF5 467 aaPredicted RBP12.47□□□□□ -0.41
SNHG1-221ENST00000544983 TMLHEQ9NVH6 421 aa12.47□□□□□ -0.41
SNHG1-221ENST00000544983 HESX1Q9UBX0 185 aa12.47□□□□□ -0.41
SNHG1-221ENST00000544983 HCRTO43612 131 aa12.46□□□□□ -0.41
SNHG1-221ENST00000544983 SEC24AO95486 1093 aa12.46□□□□□ -0.41
SNHG1-221ENST00000544983 VNN2O95498 520 aa12.46□□□□□ -0.41
SNHG1-221ENST00000544983 FGF19O95750 216 aa12.46□□□□□ -0.41
SNHG1-221ENST00000544983 SPATA31D3P0C874 917 aa12.46□□□□□ -0.41
SNHG1-221ENST00000544983 CSH1P0DML2 217 aa12.46□□□□□ -0.41
SNHG1-221ENST00000544983 CSH2P0DML3 217 aa12.46□□□□□ -0.41
SNHG1-221ENST00000544983 CD19P15391 556 aa12.46□□□□□ -0.41
SNHG1-221ENST00000544983 BDNFP23560 247 aa12.46□□□□□ -0.41
SNHG1-221ENST00000544983 CYP2F1P24903 491 aa12.46□□□□□ -0.41
SNHG1-221ENST00000544983 ANXA13P27216 316 aa12.46□□□□□ -0.41
SNHG1-221ENST00000544983 SOX5P35711 763 aa12.46□□□□□ -0.41
SNHG1-221ENST00000544983 LTBRP36941 435 aa12.46□□□□□ -0.41
SNHG1-221ENST00000544983 KLK7P49862 253 aa12.46□□□□□ -0.41
SNHG1-221ENST00000544983 APBA1Q02410 837 aa12.46□□□□□ -0.41
SNHG1-221ENST00000544983 CCDC85BQ15834 202 aaPredicted RBP12.46□□□□□ -0.41
SNHG1-221ENST00000544983 AAK1Q2M2I8 961 aa12.46□□□□□ -0.41
SNHG1-221ENST00000544983 LCLAT1Q6UWP7 414 aa12.46□□□□□ -0.41
SNHG1-221ENST00000544983 SPATA31D4Q6ZUB0 917 aa12.46□□□□□ -0.41
SNHG1-221ENST00000544983 FAM35AQ86V20 835 aa12.46□□□□□ -0.41
SNHG1-221ENST00000544983 ZNF677Q86XU0 584 aa12.46□□□□□ -0.41
SNHG1-221ENST00000544983 ANKRD52Q8NB46 1076 aa12.46□□□□□ -0.41
SNHG1-221ENST00000544983 SLC2A14Q8TDB8 520 aa12.46□□□□□ -0.41
SNHG1-221ENST00000544983 SYN2Q92777 582 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms