RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 DNAJB7Q7Z6W7 309 aaPredicted RBP20.37■□□□□ 0.85
DDX55-211ENST00000544429 TTC39CQ8N584 583 aa20.37■□□□□ 0.85
DDX55-211ENST00000544429 LEMD2Q8NC56 503 aa20.37■□□□□ 0.85
DDX55-211ENST00000544429 EHBP1Q8NDI1 1231 aa20.37■□□□□ 0.85
DDX55-211ENST00000544429 CEP295NLQ96MC4 621 aa20.37■□□□□ 0.85
DDX55-211ENST00000544429 ZNF512Q96ME7 567 aaPredicted RBP20.37■□□□□ 0.85
DDX55-211ENST00000544429 MYADMQ96S97 322 aa20.37■□□□□ 0.85
DDX55-211ENST00000544429 B3GNT5Q9BYG0 378 aa20.37■□□□□ 0.85
DDX55-211ENST00000544429 CISHQ9NSE2 258 aa20.37■□□□□ 0.85
DDX55-211ENST00000544429 TMEM30AQ9NV96 361 aa20.37■□□□□ 0.85
DDX55-211ENST00000544429 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.37■□□□□ 0.85
DDX55-211ENST00000544429 EPS15L1Q9UBC2 864 aa20.37■□□□□ 0.85
DDX55-211ENST00000544429 MAGEC2Q9UBF1 373 aaPredicted RBP20.37■□□□□ 0.85
DDX55-211ENST00000544429 ZNF638Q14966 1978 aaKnown RBP20.37■□□□□ 0.85
DDX55-211ENST00000544429 PATJQ8NI35 1801 aa20.37■□□□□ 0.85
DDX55-211ENST00000544429 HMGA1P17096 107 aaKnown RBP20.36■□□□□ 0.85
DDX55-211ENST00000544429 EEF1GP26641 437 aaKnown RBP20.36■□□□□ 0.85
DDX55-211ENST00000544429 MYL5Q02045 173 aa20.36■□□□□ 0.85
DDX55-211ENST00000544429 CETN1Q12798 172 aa20.36■□□□□ 0.85
DDX55-211ENST00000544429 SKOR2Q2VWA4 1001 aaPredicted RBP20.36■□□□□ 0.85
DDX55-211ENST00000544429 TCP11X2Q5H9J9 407 aa20.36■□□□□ 0.85
DDX55-211ENST00000544429 IQCEQ6IPM2 695 aa20.36■□□□□ 0.85
DDX55-211ENST00000544429 ACOT1Q86TX2 421 aa20.36■□□□□ 0.85
DDX55-211ENST00000544429 HS6ST3Q8IZP7 471 aa20.36■□□□□ 0.85
DDX55-211ENST00000544429 FUKQ8N0W3 1084 aa20.36■□□□□ 0.85
DDX55-211ENST00000544429 ELMOD1Q8N336 334 aa20.36■□□□□ 0.85
DDX55-211ENST00000544429 TDRD5Q8NAT2 981 aaKnown RBP20.36■□□□□ 0.85
DDX55-211ENST00000544429 ITFG1Q8TB96 612 aa20.36■□□□□ 0.85
DDX55-211ENST00000544429 BPIFA3Q9BQP9 254 aa20.36■□□□□ 0.85
DDX55-211ENST00000544429 CORO1BQ9BR76 489 aa20.36■□□□□ 0.85
DDX55-211ENST00000544429 TUBGCP2Q9BSJ2 902 aa20.36■□□□□ 0.85
DDX55-211ENST00000544429 NT5C1AQ9BXI3 368 aa20.36■□□□□ 0.85
DDX55-211ENST00000544429 ELOVL4Q9GZR5 314 aa20.36■□□□□ 0.85
DDX55-211ENST00000544429 ZNF334Q9HCZ1 680 aaPredicted RBP20.36■□□□□ 0.85
DDX55-211ENST00000544429 TRIOO75962 3097 aa20.35■□□□□ 0.85
DDX55-211ENST00000544429 KCNJ18B7U540 433 aa20.35■□□□□ 0.85
DDX55-211ENST00000544429 CLSTN1O94985 981 aa20.35■□□□□ 0.85
DDX55-211ENST00000544429 ZNF18P17022 549 aa20.35■□□□□ 0.85
DDX55-211ENST00000544429 BDNFP23560 247 aa20.35■□□□□ 0.85
DDX55-211ENST00000544429 TBXAS1P24557 533 aaPredicted RBP20.35■□□□□ 0.85
DDX55-211ENST00000544429 MTIF2P46199 727 aaKnown RBP20.35■□□□□ 0.85
DDX55-211ENST00000544429 GPR15P49685 360 aa20.35■□□□□ 0.85
DDX55-211ENST00000544429 CACNA2D1P54289 1103 aa20.35■□□□□ 0.85
DDX55-211ENST00000544429 RPL10AP62906 217 aaKnown RBP20.35■□□□□ 0.85
DDX55-211ENST00000544429 GCNT1Q02742 428 aa20.35■□□□□ 0.85
DDX55-211ENST00000544429 KCNJ12Q14500 433 aa20.35■□□□□ 0.85
DDX55-211ENST00000544429 ANO6Q4KMQ2 910 aa20.35■□□□□ 0.85
DDX55-211ENST00000544429 ITIH5Q86UX2 942 aa20.35■□□□□ 0.85
DDX55-211ENST00000544429 PLCD3Q8N3E9 789 aa20.35■□□□□ 0.85
DDX55-211ENST00000544429 FGF13Q92913 245 aa20.35■□□□□ 0.85
DDX55-211ENST00000544429 SPATA17Q96L03 361 aa20.35■□□□□ 0.85
DDX55-211ENST00000544429 MYRFLQ96LU7 910 aa20.35■□□□□ 0.85
DDX55-211ENST00000544429 NT5C1BQ96P26 610 aa20.35■□□□□ 0.85
DDX55-211ENST00000544429 ZNF518BQ9C0D4 1074 aa20.35■□□□□ 0.85
DDX55-211ENST00000544429 INTS2Q9H0H0 1204 aaKnown RBP20.35■□□□□ 0.85
DDX55-211ENST00000544429 NDST4Q9H3R1 872 aa20.35■□□□□ 0.85
DDX55-211ENST00000544429 IL21Q9HBE4 155 aa20.35■□□□□ 0.85
DDX55-211ENST00000544429 FANCLQ9NW38 375 aa20.35■□□□□ 0.85
DDX55-211ENST00000544429 CDH7Q9ULB5 785 aa20.35■□□□□ 0.85
DDX55-211ENST00000544429 ZFP37Q9Y6Q3 630 aaPredicted RBP20.35■□□□□ 0.85
DDX55-211ENST00000544429 MYH10P35580 1976 aa20.34■□□□□ 0.85
DDX55-211ENST00000544429 ANAPC1Q9H1A4 1944 aa20.34■□□□□ 0.85
DDX55-211ENST00000544429 NOL4O94818 638 aa20.34■□□□□ 0.85
DDX55-211ENST00000544429 LAMP2P13473 410 aa20.34■□□□□ 0.85
DDX55-211ENST00000544429 CD58P19256 250 aa20.34■□□□□ 0.85
DDX55-211ENST00000544429 ACO1P21399 889 aaKnown RBP20.34■□□□□ 0.85
DDX55-211ENST00000544429 SP100P23497 879 aaPredicted RBP20.34■□□□□ 0.85
DDX55-211ENST00000544429 RAD23BP54727 409 aa20.34■□□□□ 0.85
DDX55-211ENST00000544429 CYP27A1Q02318 531 aa20.34■□□□□ 0.85
DDX55-211ENST00000544429 ORC1Q13415 861 aa20.34■□□□□ 0.85
DDX55-211ENST00000544429 DDR2Q16832 855 aa20.34■□□□□ 0.85
DDX55-211ENST00000544429 VWA3BQ502W6 1294 aa20.34■□□□□ 0.85
DDX55-211ENST00000544429 HSP90AA4PQ58FG1 418 aa20.34■□□□□ 0.85
DDX55-211ENST00000544429 PHLDB3Q6NSJ2 640 aa20.34■□□□□ 0.85
DDX55-211ENST00000544429 DPY19L2P1Q6NXN4 242 aa20.34■□□□□ 0.85
DDX55-211ENST00000544429 GAREM2Q75VX8 874 aa20.34■□□□□ 0.85
DDX55-211ENST00000544429 GET4Q7L5D6 327 aaPredicted RBP20.34■□□□□ 0.85
DDX55-211ENST00000544429 RNF135Q8IUD6 432 aa20.34■□□□□ 0.85
DDX55-211ENST00000544429 NPAS3Q8IXF0 933 aa20.34■□□□□ 0.85
DDX55-211ENST00000544429 C12orf29Q8N999 325 aa20.34■□□□□ 0.85
DDX55-211ENST00000544429 ACSF2Q96CM8 615 aaPredicted RBP20.34■□□□□ 0.85
DDX55-211ENST00000544429 TCEAL4Q96EI5 215 aa20.34■□□□□ 0.85
DDX55-211ENST00000544429 TRMT2BQ96GJ1 504 aaKnown RBP20.34■□□□□ 0.85
DDX55-211ENST00000544429 C8orf48Q96LL4 319 aa20.34■□□□□ 0.85
DDX55-211ENST00000544429 ASAH2Q9NR71 780 aa20.34■□□□□ 0.85
DDX55-211ENST00000544429 GCNT4Q9P109 453 aa20.34■□□□□ 0.85
DDX55-211ENST00000544429 CLDN5O00501 218 aa20.33■□□□□ 0.85
DDX55-211ENST00000544429 ZNF197O14709 1029 aa20.33■□□□□ 0.85
DDX55-211ENST00000544429 PRKCSHP14314 528 aaPredicted RBP20.33■□□□□ 0.85
DDX55-211ENST00000544429 LRMPQ12912 555 aa20.33■□□□□ 0.85
DDX55-211ENST00000544429 VEPH1Q14D04 833 aa20.33■□□□□ 0.85
DDX55-211ENST00000544429 TRIM65Q6PJ69 517 aa20.33■□□□□ 0.85
DDX55-211ENST00000544429 PDZD4Q76G19 769 aaPredicted RBP20.33■□□□□ 0.85
DDX55-211ENST00000544429 FAM35AQ86V20 835 aa20.33■□□□□ 0.85
DDX55-211ENST00000544429 ARHGEF19Q8IW93 802 aa20.33■□□□□ 0.85
DDX55-211ENST00000544429 SLC4A11Q8NBS3 891 aa20.33■□□□□ 0.85
DDX55-211ENST00000544429 GPR152Q8TDT2 470 aa20.33■□□□□ 0.85
DDX55-211ENST00000544429 KHSRPQ92945 711 aaKnown RBP eCLIP20.33■□□□□ 0.852e-6■■■■□ 20.7
DDX55-211ENST00000544429 KREMEN1Q96MU8 473 aa20.33■□□□□ 0.85
DDX55-211ENST00000544429 HNRNPABQ99729 332 aaKnown RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms