RNA–Protein interactions for RNA: ENST00000544382.5

CLPB-213, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, human

TSL 5

Gene CLPB, Length 982 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLPB-213	ENST00000544382	DLG4	P78352	724 aa		13.49	□□□□□ -0.25
CLPB-213	ENST00000544382	FKBP3	Q00688	224 aa	Known RBP	13.49	□□□□□ -0.25
CLPB-213	ENST00000544382	MDH1B	Q5I0G3	518 aa		13.49	□□□□□ -0.25
CLPB-213	ENST00000544382	GPR158	Q5T848	1215 aa		13.49	□□□□□ -0.25
CLPB-213	ENST00000544382	TANGO2	Q6ICL3	276 aa		13.49	□□□□□ -0.25
CLPB-213	ENST00000544382	SCN4B	Q8IWT1	228 aa		13.49	□□□□□ -0.25
CLPB-213	ENST00000544382	YAF2	Q8IY57	180 aa		13.49	□□□□□ -0.25
CLPB-213	ENST00000544382	MYCBPAP	Q8TBZ2	947 aa		13.49	□□□□□ -0.25
CLPB-213	ENST00000544382	MYLPF	Q96A32	169 aa		13.49	□□□□□ -0.25
CLPB-213	ENST00000544382	TNIP3	Q96KP6	325 aa		13.49	□□□□□ -0.25
CLPB-213	ENST00000544382	MRPL45	Q9BRJ2	306 aa	Known RBP	13.49	□□□□□ -0.25
CLPB-213	ENST00000544382	RPP25	Q9BUL9	199 aa	Known RBP	13.49	□□□□□ -0.25
CLPB-213	ENST00000544382	TRMT61B	Q9BVS5	477 aa	Known RBP	13.49	□□□□□ -0.25
CLPB-213	ENST00000544382	IRF2BPL	Q9H1B7	796 aa		13.49	□□□□□ -0.25
CLPB-213	ENST00000544382	ZNF334	Q9HCZ1	680 aa	Predicted RBP	13.49	□□□□□ -0.25
CLPB-213	ENST00000544382	MAGED2	Q9UNF1	606 aa	Predicted RBP	13.49	□□□□□ -0.25
CLPB-213	ENST00000544382	MUC6	Q6W4X9	2439 aa		13.48	□□□□□ -0.25
CLPB-213	ENST00000544382	SLC16A3	O15427	465 aa	Known RBP	13.48	□□□□□ -0.25
CLPB-213	ENST00000544382	HCRT	O43612	131 aa		13.48	□□□□□ -0.25
CLPB-213	ENST00000544382	ATP2C2	O75185	946 aa		13.48	□□□□□ -0.25
CLPB-213	ENST00000544382	GADD45B	O75293	160 aa	Predicted RBP	13.48	□□□□□ -0.25
CLPB-213	ENST00000544382	VNN1	O95497	513 aa		13.48	□□□□□ -0.25
CLPB-213	ENST00000544382	HLA-DRA	P01903	254 aa		13.48	□□□□□ -0.25
CLPB-213	ENST00000544382	TRIM49	P0CI25	452 aa		13.48	□□□□□ -0.25
CLPB-213	ENST00000544382	TRIM49C	P0CI26	452 aa		13.48	□□□□□ -0.25
CLPB-213	ENST00000544382	PSMC3	P17980	439 aa		13.48	□□□□□ -0.25
CLPB-213	ENST00000544382	PTPN1	P18031	435 aa	Known RBP	13.48	□□□□□ -0.25
CLPB-213	ENST00000544382	GRIK1	P39086	918 aa		13.48	□□□□□ -0.25
CLPB-213	ENST00000544382	VCP	P55072	806 aa	Known RBP	13.48	□□□□□ -0.25
CLPB-213	ENST00000544382	PRKCQ	Q04759	706 aa		13.48	□□□□□ -0.25
CLPB-213	ENST00000544382	DDR2	Q16832	855 aa		13.48	□□□□□ -0.25
CLPB-213	ENST00000544382	PHLDB3	Q6NSJ2	640 aa		13.48	□□□□□ -0.25
CLPB-213	ENST00000544382	SCARA5	Q6ZMJ2	495 aa		13.48	□□□□□ -0.25
CLPB-213	ENST00000544382	GAREM2	Q75VX8	874 aa		13.48	□□□□□ -0.25
CLPB-213	ENST00000544382	ADSSL1	Q8N142	457 aa		13.48	□□□□□ -0.25
CLPB-213	ENST00000544382	B3GALNT2	Q8NCR0	500 aa		13.48	□□□□□ -0.25
CLPB-213	ENST00000544382	MRPS31	Q92665	395 aa	Known RBP	13.48	□□□□□ -0.25
CLPB-213	ENST00000544382	DNASE1L2	Q92874	299 aa		13.48	□□□□□ -0.25
CLPB-213	ENST00000544382	ERCC4	Q92889	916 aa	Predicted RBP	13.48	□□□□□ -0.25
CLPB-213	ENST00000544382	IRF7	Q92985	503 aa		13.48	□□□□□ -0.25
CLPB-213	ENST00000544382	DHTKD1	Q96HY7	919 aa	Predicted RBP	13.48	□□□□□ -0.25
CLPB-213	ENST00000544382	ZSWIM3	Q96MP5	696 aa		13.48	□□□□□ -0.25
CLPB-213	ENST00000544382	ELOVL4	Q9GZR5	314 aa		13.48	□□□□□ -0.25
CLPB-213	ENST00000544382	TASP1	Q9H6P5	420 aa		13.48	□□□□□ -0.25
CLPB-213	ENST00000544382	SMYD3	Q9H7B4	428 aa		13.48	□□□□□ -0.25
CLPB-213	ENST00000544382	BRD9	Q9H8M2	597 aa		13.48	□□□□□ -0.25
CLPB-213	ENST00000544382	TBC1D17	Q9HA65	648 aa		13.48	□□□□□ -0.25
CLPB-213	ENST00000544382	TMEM8A	Q9HCN3	771 aa		13.48	□□□□□ -0.25
CLPB-213	ENST00000544382	CRTAC1	Q9NQ79	661 aa		13.48	□□□□□ -0.25
CLPB-213	ENST00000544382	MAN1B1	Q9UKM7	699 aa		13.48	□□□□□ -0.25
CLPB-213	ENST00000544382	MYH10	P35580	1976 aa		13.48	□□□□□ -0.25
CLPB-213	ENST00000544382	BICDL2	A1A5D9	508 aa		13.47	□□□□□ -0.25
CLPB-213	ENST00000544382	KRBA1	A5PL33	1030 aa		13.47	□□□□□ -0.25
CLPB-213	ENST00000544382	SLC38A8	A6NNN8	435 aa		13.47	□□□□□ -0.25
CLPB-213	ENST00000544382	SOBP	A7XYQ1	873 aa		13.47	□□□□□ -0.25
CLPB-213	ENST00000544382	NOL4	O94818	638 aa		13.47	□□□□□ -0.25
CLPB-213	ENST00000544382	ASS1	P00966	412 aa	Known RBP	13.47	□□□□□ -0.25
CLPB-213	ENST00000544382	AOC1	P19801	751 aa		13.47	□□□□□ -0.25
CLPB-213	ENST00000544382	BDNF	P23560	247 aa		13.47	□□□□□ -0.25
CLPB-213	ENST00000544382	FCAR	P24071	287 aa		13.47	□□□□□ -0.25
CLPB-213	ENST00000544382	CCNE1	P24864	410 aa		13.47	□□□□□ -0.25
CLPB-213	ENST00000544382	GCLM	P48507	274 aa		13.47	□□□□□ -0.25
CLPB-213	ENST00000544382	GPR15	P49685	360 aa		13.47	□□□□□ -0.25
CLPB-213	ENST00000544382	MXI1	P50539	228 aa		13.47	□□□□□ -0.25
CLPB-213	ENST00000544382	PTPN5	P54829	565 aa		13.47	□□□□□ -0.25
CLPB-213	ENST00000544382	NLRP12	P59046	1061 aa		13.47	□□□□□ -0.25
CLPB-213	ENST00000544382	MLF2	Q15773	248 aa	Predicted RBP	13.47	□□□□□ -0.25
CLPB-213	ENST00000544382	TCERG1L	Q5VWI1	586 aa		13.47	□□□□□ -0.25
CLPB-213	ENST00000544382	KRT39	Q6A163	491 aa		13.47	□□□□□ -0.25
CLPB-213	ENST00000544382	MFSD6L	Q8IWD5	586 aa		13.47	□□□□□ -0.25
CLPB-213	ENST00000544382	TRMT2B	Q96GJ1	504 aa	Known RBP	13.47	□□□□□ -0.25
CLPB-213	ENST00000544382	PCED1B	Q96HM7	432 aa		13.47	□□□□□ -0.25
CLPB-213	ENST00000544382	SPATA17	Q96L03	361 aa		13.47	□□□□□ -0.25
CLPB-213	ENST00000544382	MMRN2	Q9H8L6	949 aa		13.47	□□□□□ -0.25
CLPB-213	ENST00000544382	OBP2A	Q9NY56	170 aa		13.47	□□□□□ -0.25
CLPB-213	ENST00000544382	MIA3	Q5JRA6	1907 aa		13.47	□□□□□ -0.25
CLPB-213	ENST00000544382	OBSL1	O75147	1896 aa		13.46	□□□□□ -0.25
CLPB-213	ENST00000544382	HEPACAM2	A8MVW5	462 aa		13.46	□□□□□ -0.25
CLPB-213	ENST00000544382	ZNF263	O14978	683 aa		13.46	□□□□□ -0.25
CLPB-213	ENST00000544382	HMGA1	P17096	107 aa	Known RBP	13.46	□□□□□ -0.25
CLPB-213	ENST00000544382	WEE1	P30291	646 aa		13.46	□□□□□ -0.25
CLPB-213	ENST00000544382	GDI1	P31150	447 aa		13.46	□□□□□ -0.25
CLPB-213	ENST00000544382	AVPR1A	P37288	418 aa		13.46	□□□□□ -0.25
CLPB-213	ENST00000544382	VIPR2	P41587	438 aa		13.46	□□□□□ -0.25
CLPB-213	ENST00000544382	PDE6C	P51160	858 aa		13.46	□□□□□ -0.25
CLPB-213	ENST00000544382	NOP14	P78316	857 aa	Known RBP	13.46	□□□□□ -0.25
CLPB-213	ENST00000544382	CYP4F8	P98187	520 aa		13.46	□□□□□ -0.25
CLPB-213	ENST00000544382	PPP3CA	Q08209	521 aa		13.46	□□□□□ -0.25
CLPB-213	ENST00000544382	GRM2	Q14416	872 aa		13.46	□□□□□ -0.25
CLPB-213	ENST00000544382	SLC44A4	Q53GD3	710 aa		13.46	□□□□□ -0.25
CLPB-213	ENST00000544382	DCAF17	Q5H9S7	520 aa	Predicted RBP	13.46	□□□□□ -0.25
CLPB-213	ENST00000544382	WDR44	Q5JSH3	913 aa		13.46	□□□□□ -0.25
CLPB-213	ENST00000544382	C1orf220	Q5T0J3	134 aa		13.46	□□□□□ -0.25
CLPB-213	ENST00000544382	SDHAF4	Q5VUM1	108 aa		13.46	□□□□□ -0.25
CLPB-213	ENST00000544382	CWF19L1	Q69YN2	538 aa	Known RBP	13.46	□□□□□ -0.25
CLPB-213	ENST00000544382	ANKRD40	Q6AI12	368 aa		13.46	□□□□□ -0.25
CLPB-213	ENST00000544382	ISM2	Q6H9L7	571 aa		13.46	□□□□□ -0.25
CLPB-213	ENST00000544382	VIT	Q6UXI7	678 aa		13.46	□□□□□ -0.25
CLPB-213	ENST00000544382	ARID3B	Q8IVW6	561 aa	Predicted RBP	13.46	□□□□□ -0.25
CLPB-213	ENST00000544382	EEF2KMT	Q96G04	330 aa		13.46	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms