RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 MIER2Q8N344 545 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 KIF2BQ8N4N8 673 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 LRRC71Q8N4P6 559 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 NARS2Q96I59 477 aaKnown RBP10.8□□□□□ -0.68
PCDH9-204ENST00000544246 HIC2Q96JB3 615 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 FAR2Q96K12 515 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 CNPY3Q9BT09 278 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 ATP6V1HQ9UI12 483 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 TRMT6Q9UJA5 497 aaKnown RBP10.8□□□□□ -0.68
PCDH9-204ENST00000544246 ASAP1Q9ULH1 1129 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 PIN4Q9Y237 131 aaKnown RBP10.8□□□□□ -0.68
PCDH9-204ENST00000544246 MYOM2P54296 1465 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 IGF2BP3O00425 579 aaKnown RBP eCLIP10.8□□□□□ -0.68
PCDH9-204ENST00000544246 PRKCBP05771 671 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 POU1F1P28069 291 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 AKIRIN2Q53H80 203 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 SPATA4Q8NEY3 305 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 RDM1Q8NG50 284 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 AIFM3Q96NN9 605 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 LRRC1Q9BTT6 524 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 ROPN1BQ9BZX4 212 aaPredicted RBP10.8□□□□□ -0.68
PCDH9-204ENST00000544246 COA1Q9GZY4 146 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 ROPN1Q9HAT0 212 aaPredicted RBP10.8□□□□□ -0.68
PCDH9-204ENST00000544246 KANSL1LA0AUZ9 987 aa10.79□□□□□ -0.68
PCDH9-204ENST00000544246 PDGFRAP16234 1089 aa10.79□□□□□ -0.68
PCDH9-204ENST00000544246 PIK3R1P27986 724 aa10.79□□□□□ -0.68
PCDH9-204ENST00000544246 PUDPQ08623 228 aa10.79□□□□□ -0.68
PCDH9-204ENST00000544246 DMPKQ09013 629 aa10.79□□□□□ -0.68
PCDH9-204ENST00000544246 RNF146Q9NTX7 359 aa10.79□□□□□ -0.68
PCDH9-204ENST00000544246 DAPK2Q9UIK4 370 aa10.79□□□□□ -0.68
PCDH9-204ENST00000544246 RNF112Q9ULX5 631 aa10.79□□□□□ -0.68
PCDH9-204ENST00000544246 ADGRG1Q9Y653 693 aa10.79□□□□□ -0.68
PCDH9-204ENST00000544246 CLTBP09497 229 aa10.79□□□□□ -0.68
PCDH9-204ENST00000544246 PRR29P0C7W0 189 aa10.79□□□□□ -0.68
PCDH9-204ENST00000544246 HSMCR30P0CW71 290 aa10.79□□□□□ -0.68
PCDH9-204ENST00000544246 FAM83EQ2M2I3 478 aa10.79□□□□□ -0.68
PCDH9-204ENST00000544246 SLC35G2Q8TBE7 412 aa10.79□□□□□ -0.68
PCDH9-204ENST00000544246 SEPT5Q99719 369 aaPredicted RBP10.79□□□□□ -0.68
PCDH9-204ENST00000544246 CINPQ9BW66 212 aaPredicted RBP10.79□□□□□ -0.68
PCDH9-204ENST00000544246 FOXP3Q9BZS1 431 aa10.79□□□□□ -0.68
PCDH9-204ENST00000544246 PALLDQ8WX93 1383 aa10.79□□□□□ -0.68
PCDH9-204ENST00000544246 TRIM43BA6NCK2 446 aa10.79□□□□□ -0.68
PCDH9-204ENST00000544246 ZNF862O60290 1169 aa10.79□□□□□ -0.68
PCDH9-204ENST00000544246 PDE9AO76083 593 aa10.79□□□□□ -0.68
PCDH9-204ENST00000544246 POTEIP0CG38 1075 aa10.79□□□□□ -0.68
PCDH9-204ENST00000544246 ETFBP38117 255 aa10.79□□□□□ -0.68
PCDH9-204ENST00000544246 IL6STP40189 918 aaPredicted RBP10.79□□□□□ -0.68
PCDH9-204ENST00000544246 MAPKAPK2P49137 400 aa10.79□□□□□ -0.68
PCDH9-204ENST00000544246 RGS7P49802 495 aa10.79□□□□□ -0.68
PCDH9-204ENST00000544246 RBP5P82980 135 aa10.79□□□□□ -0.68
PCDH9-204ENST00000544246 POTEGQ6S5H5 508 aa10.79□□□□□ -0.68
PCDH9-204ENST00000544246 MCEEQ96PE7 176 aa10.79□□□□□ -0.68
PCDH9-204ENST00000544246 SLITRK2Q9H156 845 aa10.79□□□□□ -0.68
PCDH9-204ENST00000544246 KCNH4Q9UQ05 1017 aa10.79□□□□□ -0.68
PCDH9-204ENST00000544246 IPPQ9Y573 584 aa10.79□□□□□ -0.68
PCDH9-204ENST00000544246 FAM20BO75063 409 aa10.79□□□□□ -0.68
PCDH9-204ENST00000544246 KRT6AP02538 564 aa10.79□□□□□ -0.68
PCDH9-204ENST00000544246 FCER1AP12319 257 aa10.79□□□□□ -0.68
PCDH9-204ENST00000544246 STX4Q12846 297 aa10.79□□□□□ -0.68
PCDH9-204ENST00000544246 CAMK2GQ13555 558 aaPredicted RBP10.79□□□□□ -0.68
PCDH9-204ENST00000544246 SLC44A2Q8IWA5 706 aaPredicted RBP10.79□□□□□ -0.68
PCDH9-204ENST00000544246 OSBP2Q969R2 916 aa10.79□□□□□ -0.68
PCDH9-204ENST00000544246 CTCFP49711 727 aaPredicted RBP10.79□□□□□ -0.68
PCDH9-204ENST00000544246 CDK20Q8IZL9 346 aa10.79□□□□□ -0.68
PCDH9-204ENST00000544246 FAM9CQ8IZT9 166 aa10.79□□□□□ -0.68
PCDH9-204ENST00000544246 CACTIN-AS1Q8N1I8 211 aa10.79□□□□□ -0.68
PCDH9-204ENST00000544246 SH3RF3Q8TEJ3 882 aaPredicted RBP10.79□□□□□ -0.68
PCDH9-204ENST00000544246 CPA5Q8WXQ8 436 aa10.79□□□□□ -0.68
PCDH9-204ENST00000544246 L3MBTL3Q96JM7 780 aaPredicted RBP10.79□□□□□ -0.68
PCDH9-204ENST00000544246 ARMC7Q9H6L4 198 aa10.79□□□□□ -0.68
PCDH9-204ENST00000544246 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.79□□□□□ -0.68
PCDH9-204ENST00000544246 KIDINS220Q9ULH0 1771 aa10.79□□□□□ -0.68
PCDH9-204ENST00000544246 A0A1W2PQC6 194 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 PRRG1O14668 218 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 PSTPIP1O43586 416 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 ATP6V1B2P21281 511 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 CDC42EP1Q00587 391 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 ZSWIM7Q19AV6 140 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 ZCCHC8Q6NZY4 707 aaKnown RBP10.78□□□□□ -0.68
PCDH9-204ENST00000544246 LINC00523Q86TU6 105 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 EIF2AK1Q9BQI3 630 aaKnown RBP10.78□□□□□ -0.68
PCDH9-204ENST00000544246 LIMA1Q9UHB6 759 aaKnown RBP10.78□□□□□ -0.68
PCDH9-204ENST00000544246 AGAP1Q9UPQ3 857 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 LOC100653049A0A140TA62 436 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 KRT34O76011 436 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 MFN2O95140 757 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 IL6P05231 212 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 CPA2P48052 419 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 PTPN12Q05209 780 aaKnown RBP10.78□□□□□ -0.68
PCDH9-204ENST00000544246 GALNTL6Q49A17 601 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 C2CD6Q53TS8 623 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 NAPEPLDQ6IQ20 393 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 CDC73Q6P1J9 531 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 POMGNT2Q8NAT1 580 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 ZNF333Q96JL9 665 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 GOLPH3Q9H4A6 298 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 DYRK1BQ9Y463 629 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 ZC3H13Q5T200 1668 aaKnown RBP10.78□□□□□ -0.68
PCDH9-204ENST00000544246 ASB14A6NK59 587 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 CPSF4O95639 269 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms