RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 PMS1P54277 932 aaKnown RBP7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 NNTQ13423 1086 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 SPARCL1Q14515 664 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 NAA25Q14CX7 972 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 HIF1AQ16665 826 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 FASTKD1Q53R41 847 aaKnown RBP7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 HP1BP3Q5SSJ5 553 aaPredicted RBP7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 KLHDC7AQ5VTJ3 777 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 SPATS2Q86XZ4 545 aaKnown RBP7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 ADAM2Q99965 735 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 PARD6BQ9BYG5 372 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 KRT82Q9NSB4 513 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 WTIPA6NIX2 430 aaPredicted RBP7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 XYLBO75191 536 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 UBA1P22314 1058 aaKnown RBP7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 FLT3LGP49771 235 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 GABPB1Q06547 395 aaPredicted RBP7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 UGP2Q16851 508 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 CCDC38Q502W7 563 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 RASGRP2Q7LDG7 609 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 ZNF720Q7Z2F6 126 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 MKL1Q969V6 931 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 KLRG1Q96E93 195 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 CAPNS2Q96L46 248 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 EFHD1Q9BUP0 239 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 CINPQ9BW66 212 aaPredicted RBP7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 AGPAT5Q9NUQ2 364 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 CYP39A1Q9NYL5 469 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 MRFAP1Q9Y605 127 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 USH1CQ9Y6N9 552 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 NRCAMQ92823 1304 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 ANP32DO95626 131 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 FGFR4P22455 802 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 DHX34Q14147 1143 aaKnown RBP7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 TCEAL1Q15170 157 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 GRIK5Q16478 980 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 DNAJB7Q7Z6W7 309 aaPredicted RBP7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 FEZF2Q8TBJ5 459 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 USP13Q92995 863 aaPredicted RBP7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 ARHGEF26Q96DR7 871 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 CIPCQ9C0C6 399 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 CYP3A43Q9HB55 503 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 SLC25A13Q9UJS0 675 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 PCDHB5Q9Y5E4 795 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 ACKR2O00590 384 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 SMIM24O75264 130 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 SYF2O95926 243 aaKnown RBP7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 AKAP5P24588 427 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 SOX10P56693 466 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 EFEMP1Q12805 493 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 MTA1Q13330 715 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 ORC1Q13415 861 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 NAB2Q15742 525 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 PRAMEF19Q5SWL8 479 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 OLFML1Q6UWY5 402 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 PDZD8Q8NEN9 1154 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 SPATA18Q8TC71 538 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 SCFD1Q8WVM8 642 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 DEFB118Q96PH6 123 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 SYT15Q9BQS2 421 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 ITGA11Q9UKX5 1188 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 SLC12A8A0AV02 714 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 FAM86B1E9PN63 330 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 ATP8B1O43520 1251 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 FBXO21O94952 628 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 SEC31AO94979 1220 aaKnown RBP7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 FAM86B2P0C5J1 330 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 CASP4P49662 377 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 PLD1Q13393 1074 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 PLEKHG6Q3KR16 790 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 IPMKQ8NFU5 416 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 ANKS1AQ92625 1134 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 THG1LQ9NWX6 298 aaKnown RBP7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 DDX43Q9NXZ2 648 aaKnown RBP7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 PRKAB1Q9Y478 270 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 PCDHAC2Q9Y5I4 1007 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 ORC6Q9Y5N6 252 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 MROH7Q68CQ1 1323 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 ITIH6Q6UXX5 1313 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 COL3A1P02461 1466 aaPredicted RBP7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 ZMYM2Q9UBW7 1377 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 SCAMP3O14828 347 aaKnown RBP7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 KDM1AO60341 852 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 SYNCRIPO60506 623 aaKnown RBP7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 TLR2O60603 784 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 GFAPP14136 432 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 GRK2P25098 689 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 PDAP1Q13442 181 aaKnown RBP7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 SMTNL2Q2TAL5 461 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 ARMC6Q6NXE6 501 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 VSIG10LQ86VR7 867 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 RIN2Q8WYP3 895 aaPredicted RBP7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 EFHD2Q96C19 240 aaPredicted RBP7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 ATXN7L3BQ96GX2 97 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 OSBPL8Q9BZF1 889 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 FAM96AQ9H5X1 160 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 ASB7Q9H672 318 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 CLCA2Q9UQC9 943 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms