RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 PDXKO00764 312 aa11.82□□□□□ -0.52
CDH4-201ENST00000543233 SOCS7O14512 581 aa11.82□□□□□ -0.52
CDH4-201ENST00000543233 ACSL3O95573 720 aa11.82□□□□□ -0.52
CDH4-201ENST00000543233 DDX5P17844 614 aaKnown RBP11.82□□□□□ -0.52
CDH4-201ENST00000543233 AMPD1P23109 780 aa11.82□□□□□ -0.52
CDH4-201ENST00000543233 TCEA1P23193 301 aaKnown RBP11.82□□□□□ -0.52
CDH4-201ENST00000543233 ENTPD1P49961 510 aa11.82□□□□□ -0.52
CDH4-201ENST00000543233 BTNL9Q6UXG8 535 aa11.82□□□□□ -0.52
CDH4-201ENST00000543233 VPS36Q86VN1 386 aa11.82□□□□□ -0.52
CDH4-201ENST00000543233 ZSWIM2Q8NEG5 633 aa11.82□□□□□ -0.52
CDH4-201ENST00000543233 FBXO25Q8TCJ0 367 aa11.82□□□□□ -0.52
CDH4-201ENST00000543233 VPS50Q96JG6 964 aa11.82□□□□□ -0.52
CDH4-201ENST00000543233 MAK16Q9BXY0 300 aaKnown RBP11.82□□□□□ -0.52
CDH4-201ENST00000543233 LIN28AQ9H9Z2 209 aaKnown RBP11.82□□□□□ -0.52
CDH4-201ENST00000543233 CNGB3Q9NQW8 809 aa11.82□□□□□ -0.52
CDH4-201ENST00000543233 CNTNAP1P78357 1384 aa11.82□□□□□ -0.52
CDH4-201ENST00000543233 LRRC37AA6NMS7 1700 aa11.82□□□□□ -0.52
CDH4-201ENST00000543233 STRNO43815 780 aa11.82□□□□□ -0.52
CDH4-201ENST00000543233 CCT8P50990 548 aa11.82□□□□□ -0.52
CDH4-201ENST00000543233 ZBTB16Q05516 673 aa11.82□□□□□ -0.52
CDH4-201ENST00000543233 LLGL1Q15334 1064 aa11.82□□□□□ -0.52
CDH4-201ENST00000543233 SPDYE2Q495Y8 402 aa11.82□□□□□ -0.52
CDH4-201ENST00000543233 C6orf163Q5TEZ5 329 aa11.82□□□□□ -0.52
CDH4-201ENST00000543233 GLYCTKQ8IVS8 523 aa11.82□□□□□ -0.52
CDH4-201ENST00000543233 SPOCK2Q92563 424 aa11.82□□□□□ -0.52
CDH4-201ENST00000543233 KIFC3Q9BVG8 833 aa11.82□□□□□ -0.52
CDH4-201ENST00000543233 TEKT3Q9BXF9 490 aa11.82□□□□□ -0.52
CDH4-201ENST00000543233 KCNH7Q9NS40 1196 aa11.82□□□□□ -0.52
CDH4-201ENST00000543233 AIPL1Q9NZN9 384 aa11.82□□□□□ -0.52
CDH4-201ENST00000543233 MAD1L1Q9Y6D9 718 aa11.82□□□□□ -0.52
CDH4-201ENST00000543233 SH3PXD2BA1X283 911 aa11.81□□□□□ -0.52
CDH4-201ENST00000543233 NUDT17P0C025 328 aa11.81□□□□□ -0.52
CDH4-201ENST00000543233 ANPEPP15144 967 aa11.81□□□□□ -0.52
CDH4-201ENST00000543233 CPA2P48052 419 aa11.81□□□□□ -0.52
CDH4-201ENST00000543233 SOX10P56693 466 aa11.81□□□□□ -0.52
CDH4-201ENST00000543233 MAP3K10Q02779 954 aa11.81□□□□□ -0.52
CDH4-201ENST00000543233 MKRN3Q13064 507 aaKnown RBP11.81□□□□□ -0.52
CDH4-201ENST00000543233 CBWD6Q4V339 395 aa11.81□□□□□ -0.52
CDH4-201ENST00000543233 CBWD3Q5JTY5 395 aa11.81□□□□□ -0.52
CDH4-201ENST00000543233 CBWD5Q5RIA9 395 aa11.81□□□□□ -0.52
CDH4-201ENST00000543233 FAM117BQ6P1L5 589 aa11.81□□□□□ -0.52
CDH4-201ENST00000543233 C1orf186Q6ZWK4 172 aa11.81□□□□□ -0.52
CDH4-201ENST00000543233 UBE2Q1Q7Z7E8 422 aa11.81□□□□□ -0.52
CDH4-201ENST00000543233 SRRM1Q8IYB3 904 aaKnown RBP11.81□□□□□ -0.52
CDH4-201ENST00000543233 SLC25A41Q8N5S1 370 aa11.81□□□□□ -0.52
CDH4-201ENST00000543233 ANKRD36BP1Q96IX9 119 aa11.81□□□□□ -0.52
CDH4-201ENST00000543233 CGREF1Q99674 301 aa11.81□□□□□ -0.52
CDH4-201ENST00000543233 MRPL46Q9H2W6 279 aaKnown RBP11.81□□□□□ -0.52
CDH4-201ENST00000543233 SLCO1B3Q9NPD5 702 aa11.81□□□□□ -0.52
CDH4-201ENST00000543233 UBN1Q9NPG3 1134 aa11.81□□□□□ -0.52
CDH4-201ENST00000543233 TBC1D23Q9NUY8 699 aa11.81□□□□□ -0.52
CDH4-201ENST00000543233 DCTN4Q9UJW0 460 aa11.81□□□□□ -0.52
CDH4-201ENST00000543233 ATRNL1Q5VV63 1379 aa11.81□□□□□ -0.52
CDH4-201ENST00000543233 CCDC22O60826 627 aa11.81□□□□□ -0.52
CDH4-201ENST00000543233 GAS8O95995 478 aa11.81□□□□□ -0.52
CDH4-201ENST00000543233 CDH3P22223 829 aa11.81□□□□□ -0.52
CDH4-201ENST00000543233 NPEPPSP55786 919 aa11.81□□□□□ -0.52
CDH4-201ENST00000543233 FKBP1AP62942 108 aaKnown RBP11.81□□□□□ -0.52
CDH4-201ENST00000543233 ANKDD1AQ495B1 522 aa11.81□□□□□ -0.52
CDH4-201ENST00000543233 PLA2G4FQ68DD2 849 aa11.81□□□□□ -0.52
CDH4-201ENST00000543233 PADI6Q6TGC4 694 aa11.81□□□□□ -0.52
CDH4-201ENST00000543233 PPP4R3CPQ6ZMV5 832 aa11.81□□□□□ -0.52
CDH4-201ENST00000543233 FRMD5Q7Z6J6 570 aa11.81□□□□□ -0.52
CDH4-201ENST00000543233 MTDHQ86UE4 582 aaKnown RBP11.81□□□□□ -0.52
CDH4-201ENST00000543233 GRAMD1AQ96CP6 724 aa11.81□□□□□ -0.52
CDH4-201ENST00000543233 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.81□□□□□ -0.52
CDH4-201ENST00000543233 PHTF1Q9UMS5 762 aa11.81□□□□□ -0.52
CDH4-201ENST00000543233 ARFGEF1Q9Y6D6 1849 aa11.8□□□□□ -0.52
CDH4-201ENST00000543233 MCF2LO15068 1137 aa11.8□□□□□ -0.52
CDH4-201ENST00000543233 ESRRAP11474 423 aaPredicted RBP11.8□□□□□ -0.52
CDH4-201ENST00000543233 RPL5P46777 297 aaKnown RBP11.8□□□□□ -0.52
CDH4-201ENST00000543233 BCAP31P51572 246 aa11.8□□□□□ -0.52
CDH4-201ENST00000543233 CD300CQ08708 224 aa11.8□□□□□ -0.52
CDH4-201ENST00000543233 STRN3Q13033 797 aa11.8□□□□□ -0.52
CDH4-201ENST00000543233 EPHA7Q15375 998 aa11.8□□□□□ -0.52
CDH4-201ENST00000543233 WDR45BQ5MNZ6 344 aa11.8□□□□□ -0.52
CDH4-201ENST00000543233 ARHGEF18Q6ZSZ5 1173 aa11.8□□□□□ -0.52
CDH4-201ENST00000543233 EPM2AIP1Q7L775 607 aaPredicted RBP11.8□□□□□ -0.52
CDH4-201ENST00000543233 IRF2BP2Q7Z5L9 587 aa11.8□□□□□ -0.52
CDH4-201ENST00000543233 CCDC125Q86Z20 511 aa11.8□□□□□ -0.52
CDH4-201ENST00000543233 OR6Y1Q8NGX8 325 aa11.8□□□□□ -0.52
CDH4-201ENST00000543233 GLG1Q92896 1179 aa11.8□□□□□ -0.52
CDH4-201ENST00000543233 NACC1Q96RE7 527 aa11.8□□□□□ -0.52
CDH4-201ENST00000543233 TAAR1Q96RJ0 339 aa11.8□□□□□ -0.52
CDH4-201ENST00000543233 SNX25Q9H3E2 840 aa11.8□□□□□ -0.52
CDH4-201ENST00000543233 DDX43Q9NXZ2 648 aaKnown RBP11.8□□□□□ -0.52
CDH4-201ENST00000543233 MTRF1LQ9UGC7 380 aaKnown RBP11.8□□□□□ -0.52
CDH4-201ENST00000543233 VPS51Q9UID3 782 aa11.8□□□□□ -0.52
CDH4-201ENST00000543233 TELO2Q9Y4R8 837 aa11.8□□□□□ -0.52
CDH4-201ENST00000543233 NRXN2Q9P2S2 1712 aa11.8□□□□□ -0.52
CDH4-201ENST00000543233 FOCADQ5VW36 1801 aa11.8□□□□□ -0.52
CDH4-201ENST00000543233 CCDC188H7C350 402 aa11.8□□□□□ -0.52
CDH4-201ENST00000543233 CIB2O75838 187 aa11.8□□□□□ -0.52
CDH4-201ENST00000543233 FBXO21O94952 628 aa11.8□□□□□ -0.52
CDH4-201ENST00000543233 VDRP11473 427 aa11.8□□□□□ -0.52
CDH4-201ENST00000543233 PSMC2P35998 433 aaKnown RBP11.8□□□□□ -0.52
CDH4-201ENST00000543233 DLG4P78352 724 aa11.8□□□□□ -0.52
CDH4-201ENST00000543233 ASPHQ12797 758 aa11.8□□□□□ -0.52
CDH4-201ENST00000543233 MTMR2Q13614 643 aa11.8□□□□□ -0.52
CDH4-201ENST00000543233 PDK3Q15120 406 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms