RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 USO1O60763 962 aaKnown RBP4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 DNAJB5O75953 348 aa4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 USP1O94782 785 aa4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 RTN3O95197 1032 aaPredicted RBP4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 GLP2RO95838 553 aa4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 TK1P04183 234 aa4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 RPN1P04843 607 aaKnown RBP4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 C8BP07358 591 aa4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 GRPP07492 148 aa4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 RAP2AP10114 183 aa4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 BMP7P18075 431 aa4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 RXRAP19793 462 aa4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 BTF3P20290 206 aaKnown RBP4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 HOXD12P35452 270 aa4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 MAN2A2P49641 1150 aa4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 DRG2P55039 364 aaKnown RBP4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 CASP6P55212 293 aa4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 UCP3P55916 312 aa4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 DUSP2Q05923 314 aa4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 TMEM62Q0P6H9 643 aa4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 SLC29A2Q14542 456 aa4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 ZNF827Q17R98 1081 aa4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 SLC5A9Q2M3M2 681 aa4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 PRAMEF14Q5SWL7 426 aa4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 ADGRF1Q5T601 910 aa4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 MAP3K21Q5TCX8 1036 aa4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 TCERG1LQ5VWI1 586 aa4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 FAM205BPQ63HN1 556 aa4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 RAP1GAP2Q684P5 730 aa4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 HAUS3Q68CZ6 603 aa4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 ZNF572Q7Z3I7 529 aaPredicted RBP4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 KRT73Q86Y46 540 aa4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 CCDC28AQ8IWP9 274 aa4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 TDRD7Q8NHU6 1098 aaKnown RBP4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 SCAMP5Q8TAC9 235 aa4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 ADAMTS15Q8TE58 950 aa4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 ST8SIA4Q92187 359 aa4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 GFM2Q969S9 779 aaKnown RBP4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 ZUFSPQ96AP4 578 aa4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 SDCCAG3Q96C92 435 aa4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 ZSWIM3Q96MP5 696 aa4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 TIGD1Q96MW7 591 aa4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 MS4A7Q9GZW8 240 aaPredicted RBP4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 PAIP1Q9H074 479 aaKnown RBP4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 ING3Q9NXR8 418 aa4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 NKIRAS2Q9NYR9 191 aa4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 LPAR3Q9UBY5 353 aa4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 ZMYND8Q9ULU4 1186 aaPredicted RBP4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 PLA2G2DQ9UNK4 145 aa4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 PRG4Q92954 1404 aaPredicted RBP4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 H0Y3Z8 333 aa4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 WNT10BO00744 389 aa4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 MTSS1O43312 755 aa4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 AHCYL1O43865 530 aa4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 PLOD3O60568 738 aa4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 KLHL18O94889 574 aa4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 HNRNPA1P09651 372 aaKnown RBP eCLIP4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 CKBP12277 381 aa4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 PECAM1P16284 738 aaPredicted RBP4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 KCNQ1P51787 676 aa4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 BCAT1P54687 386 aa4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 ALDH18A1P54886 795 aaKnown RBP4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 PSMC1P62191 440 aaKnown RBP4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 CACNB2Q08289 660 aaPredicted RBP4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 NSUN2Q08J23 767 aaKnown RBP eCLIP4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 SCAPQ12770 1279 aa4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 MYBPC2Q14324 1141 aa4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 TRIM71Q2Q1W2 868 aaKnown RBP4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 VWA3BQ502W6 1294 aa4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 ATPAF1Q5TC12 328 aaPredicted RBP4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 AFMIDQ63HM1 303 aa4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 ACAD10Q6JQN1 1059 aa4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 ZDHHC24Q6UX98 284 aa4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 CLEC14AQ86T13 490 aa4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 TMEM151BQ8IW70 566 aa4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 ZMIZ2Q8NF64 920 aa4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 OR6Y1Q8NGX8 325 aa4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 CEP70Q8NHQ1 597 aa4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 MDM1Q8TC05 714 aa4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 CPA5Q8WXQ8 436 aa4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 RAPGEF4Q8WZA2 1011 aa4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 NEIL1Q96FI4 390 aaPredicted RBP4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 TTC14Q96N46 770 aa4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 CLIC6Q96NY7 704 aa4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 TRAPPC9Q96Q05 1148 aa4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 TWNKQ96RR1 684 aa4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 WRNIP1Q96S55 665 aa4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 RBM15Q96T37 977 aaKnown RBP eCLIP4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 GPR63Q9BZJ6 419 aa4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 TP63Q9H3D4 680 aaPredicted RBP4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 KRT84Q9NSB2 600 aa4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 KLHL14Q9P2G3 628 aa4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 CA14Q9ULX7 337 aa4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 VWA7Q9Y334 891 aa4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 KCTD3Q9Y597 815 aa4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 ADAMTS20P59510 1910 aa4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 ADAMTS12P58397 1594 aa4.44□□□□□ -1.7
SFSWAP-211ENST00000542813 ATRNL1Q5VV63 1379 aa4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 PBRM1Q86U86 1689 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms