RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 COG5Q9UP83 839 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 PCDHAC2Q9Y5I4 1007 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 LOC100653049A0A140TA62 436 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 TM9SF1O15321 606 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 PFDN1O60925 122 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 KRT34O76011 436 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 KLHL2O95198 593 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 CBX6O95503 412 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 LSM8O95777 96 aaKnown RBP8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 CALCAP01258 141 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 STX1BP61266 288 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 RBP5P82980 135 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 NFIL3Q16649 462 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 LACTB2Q53H82 288 aaPredicted RBP8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 FAXCQ5TGI0 409 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 ATF7IP2Q5U623 682 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 KATNAL2Q8IYT4 538 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 ICA1LQ8NDH6 482 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 AGR3Q8TD06 166 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 ZNF75CPQ92670 426 aaPredicted RBP8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 HDAC11Q96DB2 347 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 TMEM59LQ9UK28 342 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 STAP1Q9ULZ2 295 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 PCDHA2Q9Y5H9 948 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 SNX9Q9Y5X1 595 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 GJB6O95452 261 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 ACADSP16219 412 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 GPD1P21695 349 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 CALB2P22676 271 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 SHROOM1Q2M3G4 852 aaPredicted RBP8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 LRRC23Q53EV4 343 aaPredicted RBP8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 PRPF39Q86UA1 669 aaKnown RBP8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 EMC1Q8N766 993 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 CCNYL1Q8N7R7 359 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 TMEM161BQ8NDZ6 487 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 TLCD1Q96CP7 247 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 ANKRD27Q96NW4 1050 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 SIX2Q9NPC8 291 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 FAF1Q9UNN5 650 aaPredicted RBP8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 TRPM3Q9HCF6 1732 aaPredicted RBP8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 CRYBG1Q9Y4K1 1723 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 TCRBV7S2A1N4TA0A589 114 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 F8VP50 259 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 SKAP2O75563 359 aaPredicted RBP8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 MAP3K6O95382 1288 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 ESRRGP62508 458 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 DEUP1Q05D60 604 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 CUL3Q13618 768 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 STILQ15468 1287 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 MFSD5Q6N075 450 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 TATDN1Q6P1N9 297 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 SLC26A11Q86WA9 606 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 TRIML2Q8N7C3 387 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 BEST2Q8NFU1 509 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 PRPF31Q8WWY3 499 aaKnown RBP8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 ATXN7L3BQ96GX2 97 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 KREMEN1Q96MU8 473 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 NT5C1AQ9BXI3 368 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 MYLK2Q9H1R3 596 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 ARFGEF2Q9Y6D5 1785 aa8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 IGKV6D-41A0A0C4DH26 115 aa8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 SUPT20HL2P0C7V6 817 aa8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 PYGBP11216 843 aa8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 EPHB2P29323 1055 aa8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 NLRP11P59045 1033 aaKnown RBP8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 ATP13A4Q4VNC1 1196 aa8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 PGBD4Q96DM1 585 aa8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 DEFB129Q9H1M3 183 aa8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 CCDC68Q9H2F9 335 aa8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 IPO11Q9UI26 975 aaKnown RBP8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 PNMA3Q9UL41 463 aa8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 STARD13Q9Y3M8 1113 aa8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 AHDC1Q5TGY3 1603 aaPredicted RBP8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 HUS1O60921 280 aa8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 ADORA2BP29275 332 aa8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 RPA3P35244 121 aaPredicted RBP8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 MAMLD1Q13495 774 aa8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 TTLL4Q14679 1199 aa8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 WASHC2DQ5SRD0 308 aa8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 RNF43Q68DV7 783 aa8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 C12orf56Q8IXR9 622 aa8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 PIAS4Q8N2W9 510 aaPredicted RBP8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 CMTM5Q96DZ9 223 aa8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 VPS39Q96JC1 886 aa8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 ZBTB45Q96K62 511 aaPredicted RBP8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 AGAP3Q96P47 875 aa8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 TMEM109Q9BVC6 243 aa8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 SLCO1B3Q9NPD5 702 aa8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 DMAC2Q9NW81 257 aa8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 NOD1Q9Y239 953 aa8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 IL18RAPO95256 599 aa8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 PAEPP09466 180 aa8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 ADRA1DP25100 572 aa8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 TMEM132DQ14C87 1099 aa8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 RASA2Q15283 850 aa8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 TTC27Q6P3X3 843 aa8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 KCNV1Q6PIU1 500 aa8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.56□□□□□ -1.042e-8■■■■■ 64.9
PRKAB1-207ENST00000542698 AGBL3Q8NEM8 1001 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms