RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 PCDHGC5Q9Y5F6 944 aa24.53■■□□□ 1.52
HOMER3-205ENST00000542541 BRD2P25440 801 aaKnown RBP24.52■■□□□ 1.52
HOMER3-205ENST00000542541 CFAP221Q4G0U5 840 aa24.52■■□□□ 1.52
HOMER3-205ENST00000542541 PPP1R26Q5T8A7 1209 aaPredicted RBP24.52■■□□□ 1.52
HOMER3-205ENST00000542541 PALB2Q86YC2 1186 aa24.52■■□□□ 1.52
HOMER3-205ENST00000542541 SLC2A14Q8TDB8 520 aa24.52■■□□□ 1.52
HOMER3-205ENST00000542541 EPS8L1Q8TE68 723 aa24.52■■□□□ 1.52
HOMER3-205ENST00000542541 LPIN3Q9BQK8 851 aa24.52■■□□□ 1.52
HOMER3-205ENST00000542541 B3GNT5Q9BYG0 378 aa24.52■■□□□ 1.52
HOMER3-205ENST00000542541 TLE6Q9H808 572 aa24.52■■□□□ 1.52
HOMER3-205ENST00000542541 TMLHEQ9NVH6 421 aa24.52■■□□□ 1.52
HOMER3-205ENST00000542541 HESX1Q9UBX0 185 aa24.52■■□□□ 1.52
HOMER3-205ENST00000542541 TRANK1O15050 2925 aa24.52■■□□□ 1.52
HOMER3-205ENST00000542541 O00370 1275 aa24.51■■□□□ 1.51
HOMER3-205ENST00000542541 SERPING1P05155 500 aa24.51■■□□□ 1.51
HOMER3-205ENST00000542541 CCDC130P13994 396 aa24.51■■□□□ 1.51
HOMER3-205ENST00000542541 ATF2P15336 505 aa24.51■■□□□ 1.51
HOMER3-205ENST00000542541 LCLAT1Q6UWP7 414 aa24.51■■□□□ 1.51
HOMER3-205ENST00000542541 RNF19BQ6ZMZ0 732 aa24.51■■□□□ 1.51
HOMER3-205ENST00000542541 FUKQ8N0W3 1084 aa24.51■■□□□ 1.51
HOMER3-205ENST00000542541 PGLYRP2Q96PD5 576 aa24.51■■□□□ 1.51
HOMER3-205ENST00000542541 PANX2Q96RD6 677 aa24.51■■□□□ 1.51
HOMER3-205ENST00000542541 PDCL3Q9H2J4 239 aa24.51■■□□□ 1.51
HOMER3-205ENST00000542541 ABI2Q9NYB9 513 aaPredicted RBP24.51■■□□□ 1.51
HOMER3-205ENST00000542541 HSFX1Q9UBD0 423 aa24.51■■□□□ 1.51
HOMER3-205ENST00000542541 COL4A4P53420 1690 aaPredicted RBP24.51■■□□□ 1.51
HOMER3-205ENST00000542541 MTMR11A4FU01 709 aa24.5■■□□□ 1.51
HOMER3-205ENST00000542541 ELF1P32519 619 aa24.5■■□□□ 1.51
HOMER3-205ENST00000542541 SLC8A3P57103 927 aa24.5■■□□□ 1.51
HOMER3-205ENST00000542541 GOLGA8FQ08AF8 430 aa24.5■■□□□ 1.51
HOMER3-205ENST00000542541 GOLGA8DPQ0D2H9 430 aa24.5■■□□□ 1.51
HOMER3-205ENST00000542541 MEA1Q16626 185 aa24.5■■□□□ 1.51
HOMER3-205ENST00000542541 E4F1Q66K89 784 aaPredicted RBP24.5■■□□□ 1.51
HOMER3-205ENST00000542541 NOP9Q86U38 636 aaKnown RBP24.5■■□□□ 1.51
HOMER3-205ENST00000542541 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.5■■□□□ 1.51
HOMER3-205ENST00000542541 GLUD1P00367 558 aa24.5■■□□□ 1.51
HOMER3-205ENST00000542541 CALCAP01258 141 aa24.5■■□□□ 1.51
HOMER3-205ENST00000542541 ADORA2BP29275 332 aa24.5■■□□□ 1.51
HOMER3-205ENST00000542541 CDR2Q01850 454 aa24.5■■□□□ 1.51
HOMER3-205ENST00000542541 ADCY1Q08828 1119 aa24.5■■□□□ 1.51
HOMER3-205ENST00000542541 CCDC142Q17RM4 750 aa24.5■■□□□ 1.51
HOMER3-205ENST00000542541 TDRD12Q587J7 1177 aaKnown RBP24.5■■□□□ 1.51
HOMER3-205ENST00000542541 GPIHBP1Q8IV16 184 aa24.5■■□□□ 1.51
HOMER3-205ENST00000542541 ANKRD52Q8NB46 1076 aa24.5■■□□□ 1.51
HOMER3-205ENST00000542541 ATAD1Q8NBU5 361 aa24.5■■□□□ 1.51
HOMER3-205ENST00000542541 SMARCD1Q96GM5 515 aa24.5■■□□□ 1.51
HOMER3-205ENST00000542541 CDCA3Q99618 268 aaPredicted RBP24.5■■□□□ 1.51
HOMER3-205ENST00000542541 NSUN3Q9H649 340 aaKnown RBP24.5■■□□□ 1.51
HOMER3-205ENST00000542541 HAUS4Q9H6D7 363 aa24.5■■□□□ 1.51
HOMER3-205ENST00000542541 DPP7Q9UHL4 492 aa24.5■■□□□ 1.51
HOMER3-205ENST00000542541 NOCTQ9UK39 431 aaKnown RBP24.5■■□□□ 1.51
HOMER3-205ENST00000542541 TSPAN16Q9UKR8 245 aa24.5■■□□□ 1.51
HOMER3-205ENST00000542541 PCDHGC3Q9UN70 934 aa24.5■■□□□ 1.51
HOMER3-205ENST00000542541 TGM5O43548 720 aa24.49■■□□□ 1.51
HOMER3-205ENST00000542541 CLASP2O75122 1294 aaKnown RBP24.49■■□□□ 1.51
HOMER3-205ENST00000542541 POU3F3P20264 500 aaPredicted RBP24.49■■□□□ 1.51
HOMER3-205ENST00000542541 TUFMP49411 452 aaKnown RBP24.49■■□□□ 1.51
HOMER3-205ENST00000542541 LILRA6Q6PI73 481 aa24.49■■□□□ 1.51
HOMER3-205ENST00000542541 VSTM1Q6UX27 236 aa24.49■■□□□ 1.51
HOMER3-205ENST00000542541 FAM35AQ86V20 835 aa24.49■■□□□ 1.51
HOMER3-205ENST00000542541 VPS36Q86VN1 386 aa24.49■■□□□ 1.51
HOMER3-205ENST00000542541 DDX1Q92499 740 aaKnown RBP24.49■■□□□ 1.51
HOMER3-205ENST00000542541 PDLIM2Q96JY6 352 aa24.49■■□□□ 1.51
HOMER3-205ENST00000542541 ZSWIM1Q9BR11 485 aa24.49■■□□□ 1.51
HOMER3-205ENST00000542541 CEP83Q9Y592 693 aa24.49■■□□□ 1.51
HOMER3-205ENST00000542541 ATG2AQ2TAZ0 1938 aa24.49■■□□□ 1.51
HOMER3-205ENST00000542541 CLDN5O00501 218 aa24.48■■□□□ 1.51
HOMER3-205ENST00000542541 FAM200BP0CF97 657 aa24.48■■□□□ 1.51
HOMER3-205ENST00000542541 SKILP12757 684 aa24.48■■□□□ 1.51
HOMER3-205ENST00000542541 BDNFP23560 247 aa24.48■■□□□ 1.51
HOMER3-205ENST00000542541 MAGEA11P43364 429 aa24.48■■□□□ 1.51
HOMER3-205ENST00000542541 CLCN4P51793 760 aa24.48■■□□□ 1.51
HOMER3-205ENST00000542541 CDK17Q00537 523 aa24.48■■□□□ 1.51
HOMER3-205ENST00000542541 GOLGA7BQ2TAP0 167 aa24.48■■□□□ 1.51
HOMER3-205ENST00000542541 TAF3Q5VWG9 929 aa24.48■■□□□ 1.51
HOMER3-205ENST00000542541 ELMSAN1Q6PJG2 1045 aa24.48■■□□□ 1.51
HOMER3-205ENST00000542541 PAQR9Q6ZVX9 377 aa24.48■■□□□ 1.51
HOMER3-205ENST00000542541 CCDC186Q7Z3E2 898 aa24.48■■□□□ 1.51
HOMER3-205ENST00000542541 RBM23Q86U06 439 aaKnown RBP24.48■■□□□ 1.51
HOMER3-205ENST00000542541 TCEAL8Q8IYN2 117 aa24.48■■□□□ 1.51
HOMER3-205ENST00000542541 GAS2L1Q99501 681 aaPredicted RBP24.48■■□□□ 1.51
HOMER3-205ENST00000542541 AGPAT1Q99943 283 aa24.48■■□□□ 1.51
HOMER3-205ENST00000542541 ZNF518BQ9C0D4 1074 aa24.48■■□□□ 1.51
HOMER3-205ENST00000542541 MICAL2O94851 1124 aa24.47■■□□□ 1.51
HOMER3-205ENST00000542541 BCAT1P54687 386 aa24.47■■□□□ 1.51
HOMER3-205ENST00000542541 DUSP4Q13115 394 aa24.47■■□□□ 1.51
HOMER3-205ENST00000542541 HGSNATQ68CP4 663 aa24.47■■□□□ 1.51
HOMER3-205ENST00000542541 WDR59Q6PJI9 974 aa24.47■■□□□ 1.51
HOMER3-205ENST00000542541 ADGRD2Q7Z7M1 963 aa24.47■■□□□ 1.51
HOMER3-205ENST00000542541 FAM161BQ96MY7 647 aa24.47■■□□□ 1.51
HOMER3-205ENST00000542541 DUSP16Q9BY84 665 aa24.47■■□□□ 1.51
HOMER3-205ENST00000542541 LHX5Q9H2C1 402 aa24.47■■□□□ 1.51
HOMER3-205ENST00000542541 CYP4F11Q9HBI6 524 aa24.47■■□□□ 1.51
HOMER3-205ENST00000542541 KRT82Q9NSB4 513 aa24.47■■□□□ 1.51
HOMER3-205ENST00000542541 PRRG1O14668 218 aa24.46■■□□□ 1.51
HOMER3-205ENST00000542541 PER2O15055 1255 aa24.46■■□□□ 1.51
HOMER3-205ENST00000542541 AP1G2O75843 785 aa24.46■■□□□ 1.51
HOMER3-205ENST00000542541 TNFAIP3P21580 790 aa24.46■■□□□ 1.51
HOMER3-205ENST00000542541 CYP2F1P24903 491 aa24.46■■□□□ 1.51
HOMER3-205ENST00000542541 NRIP1P48552 1158 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms