RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 PFKMP08237 780 aa11.64□□□□□ -0.55
SCG3-202ENST00000542355 PEX5P50542 639 aa11.64□□□□□ -0.55
SCG3-202ENST00000542355 ITIH3Q06033 890 aa11.64□□□□□ -0.55
SCG3-202ENST00000542355 GRIK3Q13003 919 aa11.64□□□□□ -0.55
SCG3-202ENST00000542355 PAN2Q504Q3 1202 aaKnown RBP11.64□□□□□ -0.55
SCG3-202ENST00000542355 SLC39A5Q6ZMH5 540 aa11.64□□□□□ -0.55
SCG3-202ENST00000542355 OSTM1Q86WC4 334 aa11.64□□□□□ -0.55
SCG3-202ENST00000542355 C3orf20Q8ND61 904 aa11.64□□□□□ -0.55
SCG3-202ENST00000542355 GIPC2Q8TF65 315 aa11.64□□□□□ -0.55
SCG3-202ENST00000542355 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.64□□□□□ -0.55
SCG3-202ENST00000542355 FTHL17Q9BXU8 183 aa11.64□□□□□ -0.55
SCG3-202ENST00000542355 CARD9Q9H257 536 aa11.64□□□□□ -0.55
SCG3-202ENST00000542355 HESX1Q9UBX0 185 aa11.64□□□□□ -0.55
SCG3-202ENST00000542355 PCDHA3Q9Y5H8 950 aa11.64□□□□□ -0.55
SCG3-202ENST00000542355 SCN1AP35498 2009 aa11.64□□□□□ -0.55
SCG3-202ENST00000542355 RALGAPA2Q2PPJ7 1873 aa11.64□□□□□ -0.55
SCG3-202ENST00000542355 PGRMC1O00264 195 aaKnown RBP11.64□□□□□ -0.55
SCG3-202ENST00000542355 PROSCO94903 275 aa11.64□□□□□ -0.55
SCG3-202ENST00000542355 KRT3P12035 628 aa11.64□□□□□ -0.55
SCG3-202ENST00000542355 CCDC130P13994 396 aa11.64□□□□□ -0.55
SCG3-202ENST00000542355 WARSP23381 471 aaKnown RBP11.64□□□□□ -0.55
SCG3-202ENST00000542355 ACAT1P24752 427 aaKnown RBP11.64□□□□□ -0.55
SCG3-202ENST00000542355 CTNNA1P35221 906 aaKnown RBP11.64□□□□□ -0.55
SCG3-202ENST00000542355 SLC1A1P43005 524 aa11.64□□□□□ -0.55
SCG3-202ENST00000542355 FAM189BP81408 668 aa11.64□□□□□ -0.55
SCG3-202ENST00000542355 AADACL2Q6P093 401 aa11.64□□□□□ -0.55
SCG3-202ENST00000542355 TTC30AQ86WT1 665 aa11.64□□□□□ -0.55
SCG3-202ENST00000542355 RASGEF1CQ8N431 466 aa11.64□□□□□ -0.55
SCG3-202ENST00000542355 MSANTD4Q8NCY6 345 aa11.64□□□□□ -0.55
SCG3-202ENST00000542355 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.64□□□□□ -0.55
SCG3-202ENST00000542355 MICAL1Q8TDZ2 1067 aa11.64□□□□□ -0.55
SCG3-202ENST00000542355 TNIP3Q96KP6 325 aa11.64□□□□□ -0.55
SCG3-202ENST00000542355 AP1M1Q9BXS5 423 aa11.64□□□□□ -0.55
SCG3-202ENST00000542355 CCDC66A2RUB6 948 aa11.63□□□□□ -0.55
SCG3-202ENST00000542355 TULP2O00295 520 aa11.63□□□□□ -0.55
SCG3-202ENST00000542355 PITPNM1O00562 1244 aa11.63□□□□□ -0.55
SCG3-202ENST00000542355 ATP2C2O75185 946 aa11.63□□□□□ -0.55
SCG3-202ENST00000542355 FGGP02679 453 aa11.63□□□□□ -0.55
SCG3-202ENST00000542355 CTNNA2P26232 953 aa11.63□□□□□ -0.55
SCG3-202ENST00000542355 ADORA2BP29275 332 aa11.63□□□□□ -0.55
SCG3-202ENST00000542355 SSR1P43307 286 aaKnown RBP11.63□□□□□ -0.55
SCG3-202ENST00000542355 RGS7P49802 495 aa11.63□□□□□ -0.55
SCG3-202ENST00000542355 CDR1P51861 262 aa11.63□□□□□ -0.55
SCG3-202ENST00000542355 MRPS25P82663 173 aaKnown RBP11.63□□□□□ -0.55
SCG3-202ENST00000542355 TUSC3Q13454 348 aa11.63□□□□□ -0.55
SCG3-202ENST00000542355 TIGD5Q53EQ6 642 aa11.63□□□□□ -0.55
SCG3-202ENST00000542355 PPP1R15BQ5SWA1 713 aa11.63□□□□□ -0.55
SCG3-202ENST00000542355 ARHGAP17Q68EM7 881 aa11.63□□□□□ -0.55
SCG3-202ENST00000542355 FBXO38Q6PIJ6 1188 aa11.63□□□□□ -0.55
SCG3-202ENST00000542355 GLB1LQ6UWU2 654 aa11.63□□□□□ -0.55
SCG3-202ENST00000542355 XYLT1Q86Y38 959 aa11.63□□□□□ -0.55
SCG3-202ENST00000542355 MMGT1Q8N4V1 131 aa11.63□□□□□ -0.55
SCG3-202ENST00000542355 B3GALNT2Q8NCR0 500 aa11.63□□□□□ -0.55
SCG3-202ENST00000542355 HASPINQ8TF76 798 aa11.63□□□□□ -0.55
SCG3-202ENST00000542355 SCLYQ96I15 445 aa11.63□□□□□ -0.55
SCG3-202ENST00000542355 RNPC3Q96LT9 517 aaKnown RBP11.63□□□□□ -0.55
SCG3-202ENST00000542355 PNKPQ96T60 521 aa11.63□□□□□ -0.55
SCG3-202ENST00000542355 LRRC1Q9BTT6 524 aa11.63□□□□□ -0.55
SCG3-202ENST00000542355 DNAI2Q9GZS0 605 aa11.63□□□□□ -0.55
SCG3-202ENST00000542355 DDX43Q9NXZ2 648 aaKnown RBP11.63□□□□□ -0.55
SCG3-202ENST00000542355 WDR35Q9P2L0 1181 aa11.63□□□□□ -0.55
SCG3-202ENST00000542355 IP6K2Q9UHH9 426 aa11.63□□□□□ -0.55
SCG3-202ENST00000542355 SIGLEC16A6NMB1 481 aa11.62□□□□□ -0.55
SCG3-202ENST00000542355 E5RJQ4 531 aa11.62□□□□□ -0.55
SCG3-202ENST00000542355 I3L4J1 428 aa11.62□□□□□ -0.55
SCG3-202ENST00000542355 ENPP3O14638 875 aa11.62□□□□□ -0.55
SCG3-202ENST00000542355 GABRDO14764 452 aa11.62□□□□□ -0.55
SCG3-202ENST00000542355 PYGMP11217 842 aa11.62□□□□□ -0.55
SCG3-202ENST00000542355 RFC1P35251 1148 aaPredicted RBP11.62□□□□□ -0.55
SCG3-202ENST00000542355 GABRB2P47870 512 aa11.62□□□□□ -0.55
SCG3-202ENST00000542355 PSEN1P49768 467 aa11.62□□□□□ -0.55
SCG3-202ENST00000542355 CCL23P55773 120 aa11.62□□□□□ -0.55
SCG3-202ENST00000542355 RWDD2BP57060 319 aa11.62□□□□□ -0.55
SCG3-202ENST00000542355 C1QTNF8P60827 252 aa11.62□□□□□ -0.55
SCG3-202ENST00000542355 OGDHQ02218 1023 aa11.62□□□□□ -0.55
SCG3-202ENST00000542355 TAP1Q03518 808 aa11.62□□□□□ -0.55
SCG3-202ENST00000542355 ZNF268Q14587 947 aaPredicted RBP11.62□□□□□ -0.55
SCG3-202ENST00000542355 LONRF2Q1L5Z9 754 aa11.62□□□□□ -0.55
SCG3-202ENST00000542355 PKDCCQ504Y2 493 aa11.62□□□□□ -0.55
SCG3-202ENST00000542355 PLEKHG4Q58EX7 1191 aa11.62□□□□□ -0.55
SCG3-202ENST00000542355 CLLU1OSQ5K130 101 aa11.62□□□□□ -0.55
SCG3-202ENST00000542355 PMF1Q6P1K2 205 aa11.62□□□□□ -0.55
SCG3-202ENST00000542355 ANKRD33Q7Z3H0 272 aa11.62□□□□□ -0.55
SCG3-202ENST00000542355 ADAT2Q7Z6V5 191 aaKnown RBP11.62□□□□□ -0.55
SCG3-202ENST00000542355 DNAJC5GQ8N7S2 189 aa11.62□□□□□ -0.55
SCG3-202ENST00000542355 SLC2A14Q8TDB8 520 aa11.62□□□□□ -0.55
SCG3-202ENST00000542355 IPO4Q8TEX9 1081 aaKnown RBP11.62□□□□□ -0.55
SCG3-202ENST00000542355 SLC35F5Q8WV83 523 aa11.62□□□□□ -0.55
SCG3-202ENST00000542355 ZNF333Q96JL9 665 aa11.62□□□□□ -0.55
SCG3-202ENST00000542355 HINFPQ9BQA5 517 aa11.62□□□□□ -0.55
SCG3-202ENST00000542355 HIPK3Q9H422 1215 aa11.62□□□□□ -0.55
SCG3-202ENST00000542355 DCDC2CA8MYV0 355 aa11.62□□□□□ -0.55
SCG3-202ENST00000542355 F8VP50 259 aa11.62□□□□□ -0.55
SCG3-202ENST00000542355 KRIT1O00522 736 aa11.62□□□□□ -0.55
SCG3-202ENST00000542355 FAM163BP0C2L3 166 aa11.62□□□□□ -0.55
SCG3-202ENST00000542355 BRCC3P46736 316 aa11.62□□□□□ -0.55
SCG3-202ENST00000542355 TLE2Q04725 743 aa11.62□□□□□ -0.55
SCG3-202ENST00000542355 FAAP100Q0VG06 881 aa11.62□□□□□ -0.55
SCG3-202ENST00000542355 CCDC142Q17RM4 750 aa11.62□□□□□ -0.55
SCG3-202ENST00000542355 TRIM60Q495X7 471 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms