RNA–Protein interactions for RNA: ENST00000542264.1

ARAP1-215, Transcript of ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, human

TSL 3

Gene ARAP1, Length 271 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARAP1-215	ENST00000542264	SLC8A2	Q9UPR5	921 aa		11.42	□□□□□ -0.58
ARAP1-215	ENST00000542264	SNX9	Q9Y5X1	595 aa		11.42	□□□□□ -0.58
ARAP1-215	ENST00000542264	TRAV19	A0A0A6YYK7	116 aa		11.41	□□□□□ -0.58
ARAP1-215	ENST00000542264	GOLGA8IP	A6NC78	632 aa		11.41	□□□□□ -0.58
ARAP1-215	ENST00000542264	GOLGA8J	A6NMD2	632 aa		11.41	□□□□□ -0.58
ARAP1-215	ENST00000542264	NOL4	O94818	638 aa		11.41	□□□□□ -0.58
ARAP1-215	ENST00000542264	TNNC2	P02585	160 aa		11.41	□□□□□ -0.58
ARAP1-215	ENST00000542264	FAM163B	P0C2L3	166 aa		11.41	□□□□□ -0.58
ARAP1-215	ENST00000542264	USP17L7	P0C7H9	530 aa		11.41	□□□□□ -0.58
ARAP1-215	ENST00000542264	TMEM191B	P0C7N4	346 aa		11.41	□□□□□ -0.58
ARAP1-215	ENST00000542264	MAGEA11	P43364	429 aa		11.41	□□□□□ -0.58
ARAP1-215	ENST00000542264	PDE6C	P51160	858 aa		11.41	□□□□□ -0.58
ARAP1-215	ENST00000542264	FAM160A1	Q05DH4	1040 aa		11.41	□□□□□ -0.58
ARAP1-215	ENST00000542264	DMWD	Q09019	674 aa		11.41	□□□□□ -0.58
ARAP1-215	ENST00000542264	NR1H3	Q13133	447 aa		11.41	□□□□□ -0.58
ARAP1-215	ENST00000542264	SOWAHA	Q2M3V2	549 aa		11.41	□□□□□ -0.58
ARAP1-215	ENST00000542264	FAM171B	Q6P995	826 aa		11.41	□□□□□ -0.58
ARAP1-215	ENST00000542264	VSTM1	Q6UX27	236 aa		11.41	□□□□□ -0.58
ARAP1-215	ENST00000542264	C4orf50	Q6ZRC1	276 aa		11.41	□□□□□ -0.58
ARAP1-215	ENST00000542264	CACNA2D4	Q7Z3S7	1137 aa		11.41	□□□□□ -0.58
ARAP1-215	ENST00000542264	GPD1L	Q8N335	351 aa		11.41	□□□□□ -0.58
ARAP1-215	ENST00000542264	CAMKK1	Q8N5S9	505 aa		11.41	□□□□□ -0.58
ARAP1-215	ENST00000542264	CXorf38	Q8TB03	319 aa		11.41	□□□□□ -0.58
ARAP1-215	ENST00000542264	DDX1	Q92499	740 aa	Known RBP	11.41	□□□□□ -0.58
ARAP1-215	ENST00000542264	HPDL	Q96IR7	371 aa		11.41	□□□□□ -0.58
ARAP1-215	ENST00000542264	CBWD1	Q9BRT8	395 aa		11.41	□□□□□ -0.58
ARAP1-215	ENST00000542264	CUEDC2	Q9H467	287 aa		11.41	□□□□□ -0.58
ARAP1-215	ENST00000542264	EBF3	Q9H4W6	596 aa		11.41	□□□□□ -0.58
ARAP1-215	ENST00000542264	PCIF1	Q9H4Z3	704 aa		11.41	□□□□□ -0.58
ARAP1-215	ENST00000542264	INTS13	Q9NVM9	706 aa		11.41	□□□□□ -0.58
ARAP1-215	ENST00000542264	CCL26	Q9Y258	94 aa		11.41	□□□□□ -0.58
ARAP1-215	ENST00000542264	MIA3	Q5JRA6	1907 aa		11.41	□□□□□ -0.58
ARAP1-215	ENST00000542264	FANCM	Q8IYD8	2048 aa		11.4	□□□□□ -0.58
ARAP1-215	ENST00000542264	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	11.4	□□□□□ -0.58
ARAP1-215	ENST00000542264	SLC30A4	O14863	429 aa		11.4	□□□□□ -0.58
ARAP1-215	ENST00000542264	AKAP3	O75969	853 aa		11.4	□□□□□ -0.58
ARAP1-215	ENST00000542264	PRPF6	O94906	941 aa	Known RBP	11.4	□□□□□ -0.58
ARAP1-215	ENST00000542264	CKM	P06732	381 aa		11.4	□□□□□ -0.58
ARAP1-215	ENST00000542264	PDIA4	P13667	645 aa	Known RBP	11.4	□□□□□ -0.58
ARAP1-215	ENST00000542264	PFKL	P17858	780 aa		11.4	□□□□□ -0.58
ARAP1-215	ENST00000542264	HDC	P19113	662 aa		11.4	□□□□□ -0.58
ARAP1-215	ENST00000542264	ACAT1	P24752	427 aa	Known RBP	11.4	□□□□□ -0.58
ARAP1-215	ENST00000542264	PPP3CC	P48454	512 aa		11.4	□□□□□ -0.58
ARAP1-215	ENST00000542264	GALK1	P51570	392 aa		11.4	□□□□□ -0.58
ARAP1-215	ENST00000542264	CASP5	P51878	434 aa		11.4	□□□□□ -0.58
ARAP1-215	ENST00000542264	SNRPF	P62306	86 aa	Known RBP	11.4	□□□□□ -0.58
ARAP1-215	ENST00000542264	WDR44	Q5JSH3	913 aa		11.4	□□□□□ -0.58
ARAP1-215	ENST00000542264	FAM173B	Q6P4H8	233 aa		11.4	□□□□□ -0.58
ARAP1-215	ENST00000542264	LIMS2	Q7Z4I7	341 aa		11.4	□□□□□ -0.58
ARAP1-215	ENST00000542264	ADGRF2	Q8IZF7	708 aa		11.4	□□□□□ -0.58
ARAP1-215	ENST00000542264	CPA6	Q8N4T0	437 aa		11.4	□□□□□ -0.58
ARAP1-215	ENST00000542264	FAM160A2	Q8N612	972 aa	Predicted RBP	11.4	□□□□□ -0.58
ARAP1-215	ENST00000542264	IQUB	Q8NA54	791 aa		11.4	□□□□□ -0.58
ARAP1-215	ENST00000542264	NOC3L	Q8WTT2	800 aa	Known RBP	11.4	□□□□□ -0.58
ARAP1-215	ENST00000542264	GAB3	Q8WWW8	586 aa		11.4	□□□□□ -0.58
ARAP1-215	ENST00000542264	ATP2A3	Q93084	1043 aa		11.4	□□□□□ -0.58
ARAP1-215	ENST00000542264	SPATA17	Q96L03	361 aa		11.4	□□□□□ -0.58
ARAP1-215	ENST00000542264	USP28	Q96RU2	1077 aa		11.4	□□□□□ -0.58
ARAP1-215	ENST00000542264	PKMYT1	Q99640	499 aa		11.4	□□□□□ -0.58
ARAP1-215	ENST00000542264	P2RY13	Q9BPV8	354 aa		11.4	□□□□□ -0.58
ARAP1-215	ENST00000542264	TNMD	Q9H2S6	317 aa		11.4	□□□□□ -0.58
ARAP1-215	ENST00000542264	HPS4	Q9NQG7	708 aa		11.4	□□□□□ -0.58
ARAP1-215	ENST00000542264	DUS2	Q9NX74	493 aa	Known RBP	11.4	□□□□□ -0.58
ARAP1-215	ENST00000542264	MAGEC2	Q9UBF1	373 aa	Predicted RBP	11.4	□□□□□ -0.58
ARAP1-215	ENST00000542264	SIX4	Q9UIU6	781 aa		11.4	□□□□□ -0.58
ARAP1-215	ENST00000542264	CDH9	Q9ULB4	789 aa		11.4	□□□□□ -0.58
ARAP1-215	ENST00000542264	COL4A3	Q01955	1670 aa		11.4	□□□□□ -0.59
ARAP1-215	ENST00000542264	CHD6	Q8TD26	2715 aa		11.39	□□□□□ -0.59
ARAP1-215	ENST00000542264	DCDC2B	A2VCK2	349 aa		11.39	□□□□□ -0.59
ARAP1-215	ENST00000542264	OTOL1	A6NHN0	477 aa	Predicted RBP	11.39	□□□□□ -0.59
ARAP1-215	ENST00000542264	ACACB	O00763	2458 aa		11.39	□□□□□ -0.59
ARAP1-215	ENST00000542264	RPP40	O75818	363 aa	Known RBP	11.39	□□□□□ -0.59
ARAP1-215	ENST00000542264	GNL1	P36915	607 aa	Predicted RBP	11.39	□□□□□ -0.59
ARAP1-215	ENST00000542264	NASP	P49321	788 aa	Predicted RBP	11.39	□□□□□ -0.59
ARAP1-215	ENST00000542264	GPR15	P49685	360 aa		11.39	□□□□□ -0.59
ARAP1-215	ENST00000542264	WNT7B	P56706	349 aa		11.39	□□□□□ -0.59
ARAP1-215	ENST00000542264	SRSF5	Q13243	272 aa	Known RBP	11.39	□□□□□ -0.59
ARAP1-215	ENST00000542264	MTF1	Q14872	753 aa		11.39	□□□□□ -0.59
ARAP1-215	ENST00000542264	STK38	Q15208	465 aa		11.39	□□□□□ -0.59
ARAP1-215	ENST00000542264	SDHAF4	Q5VUM1	108 aa		11.39	□□□□□ -0.59
ARAP1-215	ENST00000542264	TRIM68	Q6AZZ1	485 aa		11.39	□□□□□ -0.59
ARAP1-215	ENST00000542264	FSTL4	Q6MZW2	842 aa		11.39	□□□□□ -0.59
ARAP1-215	ENST00000542264	PRR23C	Q6ZRP0	262 aa		11.39	□□□□□ -0.59
ARAP1-215	ENST00000542264	SCN4B	Q8IWT1	228 aa		11.39	□□□□□ -0.59
ARAP1-215	ENST00000542264	PDILT	Q8N807	584 aa		11.39	□□□□□ -0.59
ARAP1-215	ENST00000542264	KIAA1958	Q8N8K9	716 aa		11.39	□□□□□ -0.59
ARAP1-215	ENST00000542264	ZSWIM2	Q8NEG5	633 aa		11.39	□□□□□ -0.59
ARAP1-215	ENST00000542264	ZNF507	Q8TCN5	953 aa		11.39	□□□□□ -0.59
ARAP1-215	ENST00000542264	OSCP1	Q8WVF1	389 aa		11.39	□□□□□ -0.59
ARAP1-215	ENST00000542264	CYP2S1	Q96SQ9	504 aa		11.39	□□□□□ -0.59
ARAP1-215	ENST00000542264	MTMR12	Q9C0I1	747 aa		11.39	□□□□□ -0.59
ARAP1-215	ENST00000542264	ECT2	Q9H8V3	914 aa		11.39	□□□□□ -0.59
ARAP1-215	ENST00000542264	TRPC7	Q9HCX4	862 aa		11.39	□□□□□ -0.59
ARAP1-215	ENST00000542264	KBTBD4	Q9NVX7	518 aa		11.39	□□□□□ -0.59
ARAP1-215	ENST00000542264	MTMR6	Q9Y217	621 aa		11.39	□□□□□ -0.59
ARAP1-215	ENST00000542264	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	11.39	□□□□□ -0.59
ARAP1-215	ENST00000542264	MAP1B	P46821	2468 aa	Known RBP	11.38	□□□□□ -0.59
ARAP1-215	ENST00000542264	AXIN1	O15169	862 aa		11.38	□□□□□ -0.59
ARAP1-215	ENST00000542264	SPTLC2	O15270	562 aa		11.38	□□□□□ -0.59
ARAP1-215	ENST00000542264	STX6	O43752	255 aa		11.38	□□□□□ -0.59

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