RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 CDC42EP1Q00587 391 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 FMO1Q01740 532 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 SRSF11Q05519 484 aaKnown RBP8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 SLC18A3Q16572 532 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 TEX35Q5T0J7 233 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 ALKBH5Q6P6C2 394 aaKnown RBP8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 CPNE8Q86YQ8 564 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 C12orf29Q8N999 325 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 LRRN4CLQ8ND94 238 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 TFAP2BQ92481 460 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 ARHGEF26Q96DR7 871 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 UCN2Q96RP3 112 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 AGPAT1Q99943 283 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 MRPL45Q9BRJ2 306 aaKnown RBP8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 SYT11Q9BT88 431 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 EDEM3Q9BZQ6 932 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 NIF3L1Q9GZT8 377 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 THAP2Q9H0W7 228 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 HIPK3Q9H422 1215 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 DPEP3Q9H4B8 488 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 OSGEPQ9NPF4 335 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 CNTN3Q9P232 1028 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 SNX9Q9Y5X1 595 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 MICAL3Q7RTP6 2002 aa8.23□□□□□ -1.09
AC005840.3-201ENST00000541888 UNC80Q8N2C7 3258 aa8.23□□□□□ -1.09
AC005840.3-201ENST00000541888 PMM2O15305 246 aa8.23□□□□□ -1.09
AC005840.3-201ENST00000541888 THAP12O43422 761 aa8.23□□□□□ -1.09
AC005840.3-201ENST00000541888 NCK2O43639 380 aa8.23□□□□□ -1.09
AC005840.3-201ENST00000541888 IPO7O95373 1038 aaKnown RBP8.23□□□□□ -1.09
AC005840.3-201ENST00000541888 EN2P19622 333 aaPredicted RBP8.23□□□□□ -1.09
AC005840.3-201ENST00000541888 TNFAIP3P21580 790 aa8.23□□□□□ -1.09
AC005840.3-201ENST00000541888 MSX1P28360 303 aa8.23□□□□□ -1.09
AC005840.3-201ENST00000541888 AXLP30530 894 aa8.23□□□□□ -1.09
AC005840.3-201ENST00000541888 GNA15P30679 374 aa8.23□□□□□ -1.09
AC005840.3-201ENST00000541888 PRKCIP41743 596 aa8.23□□□□□ -1.09
AC005840.3-201ENST00000541888 KCNJ6P48051 423 aa8.23□□□□□ -1.09
AC005840.3-201ENST00000541888 PDE6CP51160 858 aa8.23□□□□□ -1.09
AC005840.3-201ENST00000541888 VAV2P52735 878 aa8.23□□□□□ -1.09
AC005840.3-201ENST00000541888 RABGGTBP53611 331 aa8.23□□□□□ -1.09
AC005840.3-201ENST00000541888 NAP1L1P55209 391 aaKnown RBP8.23□□□□□ -1.09
AC005840.3-201ENST00000541888 BCAR1P56945 870 aa8.23□□□□□ -1.09
AC005840.3-201ENST00000541888 CDK17Q00537 523 aa8.23□□□□□ -1.09
AC005840.3-201ENST00000541888 GCNT1Q02742 428 aa8.23□□□□□ -1.09
AC005840.3-201ENST00000541888 DSC3Q14574 896 aa8.23□□□□□ -1.09
AC005840.3-201ENST00000541888 ZBTB6Q15916 424 aa8.23□□□□□ -1.09
AC005840.3-201ENST00000541888 SGSM1Q2NKQ1 1148 aa8.23□□□□□ -1.09
AC005840.3-201ENST00000541888 ZNF667Q5HYK9 610 aa8.23□□□□□ -1.09
AC005840.3-201ENST00000541888 DAB2IPQ5VWQ8 1189 aa8.23□□□□□ -1.09
AC005840.3-201ENST00000541888 C9orf57Q5W0N0 161 aa8.23□□□□□ -1.09
AC005840.3-201ENST00000541888 FAM117BQ6P1L5 589 aa8.23□□□□□ -1.09
AC005840.3-201ENST00000541888 CCDC170Q8IYT3 715 aa8.23□□□□□ -1.09
AC005840.3-201ENST00000541888 TXLNBQ8N3L3 684 aa8.23□□□□□ -1.09
AC005840.3-201ENST00000541888 DDX1Q92499 740 aaKnown RBP8.23□□□□□ -1.09
AC005840.3-201ENST00000541888 SYN2Q92777 582 aaPredicted RBP8.23□□□□□ -1.09
AC005840.3-201ENST00000541888 BTBD6Q96KE9 485 aa8.23□□□□□ -1.09
AC005840.3-201ENST00000541888 ASB7Q9H672 318 aa8.23□□□□□ -1.09
AC005840.3-201ENST00000541888 YY1AP1Q9H869 796 aa8.23□□□□□ -1.09
AC005840.3-201ENST00000541888 FAM49BQ9NUQ9 324 aa8.23□□□□□ -1.09
AC005840.3-201ENST00000541888 MYO1AQ9UBC5 1043 aa8.23□□□□□ -1.09
AC005840.3-201ENST00000541888 TJP2Q9UDY2 1190 aa8.23□□□□□ -1.09
AC005840.3-201ENST00000541888 SSU72P8A0A1W2PR75 194 aa8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 PDGFRBP09619 1106 aa8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 CD19P15391 556 aa8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 H2AFXP16104 143 aaPredicted RBP8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 SELPP16109 830 aa8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 ACAT1P24752 427 aaKnown RBP8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 GALCP54803 685 aa8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 CLLU1OSQ5K130 101 aa8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 NAA35Q5VZE5 725 aa8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 RPAINQ86UA6 219 aa8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 ZNF280BQ86YH2 543 aa8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 IQCDQ96DY2 449 aa8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 CYFIP2Q96F07 1278 aa8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 PPP1R10Q96QC0 940 aaKnown RBP8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 RPS6KC1Q96S38 1066 aa8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 ELOVL4Q9GZR5 314 aa8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 DNAJB4Q9UDY4 337 aa8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 C2CD2Q9Y426 696 aa8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 TNRC18O15417 2968 aaPredicted RBP8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 A6NJY4 79 aa8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 SRGAP2O75044 1071 aa8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 ATP2C2O75185 946 aa8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 LCA5LO95447 670 aa8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 FTCDO95954 541 aa8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 LMO2P25791 158 aa8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 CXCR5P32302 372 aa8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 GJA8P48165 433 aa8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 CTCFP49711 727 aaPredicted RBP8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 NDST1P52848 882 aa8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 PSMC1P62191 440 aaKnown RBP8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 TNNC1P63316 161 aa8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 KRT83P78385 493 aa8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 SURF1Q15526 300 aa8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 NAB2Q15742 525 aa8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 SOWAHAQ2M3V2 549 aa8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 FAM26DQ5JW98 314 aa8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 FBXO38Q6PIJ6 1188 aa8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 ACOT1Q86TX2 421 aa8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 ECHDC2Q86YB7 292 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms