RNA–Protein interactions for RNA: ENST00000541866.5

COPS7A-212, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-212ENST00000541866 HSP90AA1P07900 732 aaKnown RBP15.31■□□□□ 0.04
COPS7A-212ENST00000541866 TDGF1P13385 188 aa15.31■□□□□ 0.04
COPS7A-212ENST00000541866 FNTBP49356 437 aa15.31■□□□□ 0.04
COPS7A-212ENST00000541866 GRSF1Q12849 480 aaKnown RBP eCLIP15.31■□□□□ 0.04
COPS7A-212ENST00000541866 RUNX3Q13761 415 aa15.31■□□□□ 0.04
COPS7A-212ENST00000541866 SIM2Q14190 667 aaPredicted RBP15.31■□□□□ 0.04
COPS7A-212ENST00000541866 RSPO4Q2I0M5 234 aaPredicted RBP15.31■□□□□ 0.04
COPS7A-212ENST00000541866 SOWAHAQ2M3V2 549 aa15.31■□□□□ 0.04
COPS7A-212ENST00000541866 FOXD4L5Q5VV16 416 aaPredicted RBP15.31■□□□□ 0.04
COPS7A-212ENST00000541866 HEATR6Q6AI08 1181 aaKnown RBP15.31■□□□□ 0.04
COPS7A-212ENST00000541866 SCARA3Q6AZY7 606 aa15.31■□□□□ 0.04
COPS7A-212ENST00000541866 C4orf50Q6ZRC1 276 aa15.31■□□□□ 0.04
COPS7A-212ENST00000541866 Q6ZS52 159 aa15.31■□□□□ 0.04
COPS7A-212ENST00000541866 OSTM1Q86WC4 334 aa15.31■□□□□ 0.04
COPS7A-212ENST00000541866 CBWD2Q8IUF1 395 aa15.31■□□□□ 0.04
COPS7A-212ENST00000541866 RDH13Q8NBN7 331 aa15.31■□□□□ 0.04
COPS7A-212ENST00000541866 STKLD1Q8NE28 680 aa15.31■□□□□ 0.04
COPS7A-212ENST00000541866 TTC16Q8NEE8 873 aa15.31■□□□□ 0.04
COPS7A-212ENST00000541866 OR5B17Q8NGF7 314 aa15.31■□□□□ 0.04
COPS7A-212ENST00000541866 CXorf38Q8TB03 319 aa15.31■□□□□ 0.04
COPS7A-212ENST00000541866 FOXD4L4Q8WXT5 416 aaPredicted RBP15.31■□□□□ 0.04
COPS7A-212ENST00000541866 USP13Q92995 863 aaPredicted RBP15.31■□□□□ 0.04
COPS7A-212ENST00000541866 FUBP3Q96I24 572 aaKnown RBP eCLIP15.31■□□□□ 0.04
COPS7A-212ENST00000541866 FNBP1Q96RU3 617 aa15.31■□□□□ 0.04
COPS7A-212ENST00000541866 MMS19Q96T76 1030 aa15.31■□□□□ 0.04
COPS7A-212ENST00000541866 TRIM9Q9C026 710 aa15.31■□□□□ 0.04
COPS7A-212ENST00000541866 EBF3Q9H4W6 596 aa15.31■□□□□ 0.04
COPS7A-212ENST00000541866 TRPC7Q9HCX4 862 aa15.31■□□□□ 0.04
COPS7A-212ENST00000541866 HSPBP1Q9NZL4 362 aa15.31■□□□□ 0.04
COPS7A-212ENST00000541866 MAGEC2Q9UBF1 373 aaPredicted RBP15.31■□□□□ 0.04
COPS7A-212ENST00000541866 CCL26Q9Y258 94 aa15.31■□□□□ 0.04
COPS7A-212ENST00000541866 FRYLO94915 3013 aa15.31■□□□□ 0.04
COPS7A-212ENST00000541866 EIF3DO15371 548 aaKnown RBP eCLIP15.3■□□□□ 0.04
COPS7A-212ENST00000541866 NOL4O94818 638 aa15.3■□□□□ 0.04
COPS7A-212ENST00000541866 DLATP10515 647 aaKnown RBP15.3■□□□□ 0.04
COPS7A-212ENST00000541866 TNNI1P19237 187 aa15.3■□□□□ 0.04
COPS7A-212ENST00000541866 CNR2P34972 360 aa15.3■□□□□ 0.04
COPS7A-212ENST00000541866 TSC2P49815 1807 aa15.3■□□□□ 0.04
COPS7A-212ENST00000541866 LMNB2Q03252 620 aa15.3■□□□□ 0.04
COPS7A-212ENST00000541866 E2F4Q16254 413 aa15.3■□□□□ 0.04
COPS7A-212ENST00000541866 FOXD4L6Q3SYB3 417 aaPredicted RBP15.3■□□□□ 0.04
COPS7A-212ENST00000541866 CFAP221Q4G0U5 840 aa15.3■□□□□ 0.04
COPS7A-212ENST00000541866 FAM26FQ5R3K3 315 aa15.3■□□□□ 0.04
COPS7A-212ENST00000541866 LAIR1Q6GTX8 287 aa15.3■□□□□ 0.04
COPS7A-212ENST00000541866 FOXD4L3Q6VB84 417 aaPredicted RBP15.3■□□□□ 0.04
COPS7A-212ENST00000541866 LONP2Q86WA8 852 aa15.3■□□□□ 0.04
COPS7A-212ENST00000541866 FSIP1Q8NA03 581 aa15.3■□□□□ 0.04
COPS7A-212ENST00000541866 GLIS3Q8NEA6 775 aa15.3■□□□□ 0.04
COPS7A-212ENST00000541866 ZNF507Q8TCN5 953 aa15.3■□□□□ 0.04
COPS7A-212ENST00000541866 EXOC4Q96A65 974 aa15.3■□□□□ 0.04
COPS7A-212ENST00000541866 COL26A1Q96A83 441 aa15.3■□□□□ 0.04
COPS7A-212ENST00000541866 FAM83CQ9BQN1 747 aa15.3■□□□□ 0.04
COPS7A-212ENST00000541866 FAM13BQ9NYF5 915 aa15.3■□□□□ 0.04
COPS7A-212ENST00000541866 DLL3Q9NYJ7 618 aa15.3■□□□□ 0.04
COPS7A-212ENST00000541866 CDH9Q9ULB4 789 aa15.3■□□□□ 0.04
COPS7A-212ENST00000541866 TRAV19A0A0A6YYK7 116 aa15.29■□□□□ 0.04
COPS7A-212ENST00000541866 PRR5-ARHGAP8B1AHC4 643 aa15.29■□□□□ 0.04
COPS7A-212ENST00000541866 ATG13O75143 517 aa15.29■□□□□ 0.04
COPS7A-212ENST00000541866 CKMP06732 381 aa15.29■□□□□ 0.04
COPS7A-212ENST00000541866 PDGFRBP09619 1106 aa15.29■□□□□ 0.04
COPS7A-212ENST00000541866 PDIA4P13667 645 aaKnown RBP15.29■□□□□ 0.04
COPS7A-212ENST00000541866 SNRPFP62306 86 aaKnown RBP15.29■□□□□ 0.04
COPS7A-212ENST00000541866 ARHGAP8P85298 464 aa15.29■□□□□ 0.04
COPS7A-212ENST00000541866 CCINQ13939 588 aa15.29■□□□□ 0.04
COPS7A-212ENST00000541866 ZNF268Q14587 947 aaPredicted RBP15.29■□□□□ 0.04
COPS7A-212ENST00000541866 PDGFRLQ15198 375 aa15.29■□□□□ 0.04
COPS7A-212ENST00000541866 MAPRE1Q15691 268 aaKnown RBP15.29■□□□□ 0.04
COPS7A-212ENST00000541866 TRIM68Q6AZZ1 485 aa15.29■□□□□ 0.04
COPS7A-212ENST00000541866 FAM171BQ6P995 826 aa15.29■□□□□ 0.04
COPS7A-212ENST00000541866 SHC4Q6S5L8 630 aa15.29■□□□□ 0.04
COPS7A-212ENST00000541866 HS2ST1Q7LGA3 356 aa15.29■□□□□ 0.04
COPS7A-212ENST00000541866 TRAPPC11Q7Z392 1133 aa15.29■□□□□ 0.04
COPS7A-212ENST00000541866 WDR49Q8IV35 697 aa15.29■□□□□ 0.04
COPS7A-212ENST00000541866 CCDC127Q96BQ5 260 aa15.29■□□□□ 0.04
COPS7A-212ENST00000541866 TRMT2BQ96GJ1 504 aaKnown RBP15.29■□□□□ 0.04
COPS7A-212ENST00000541866 MYRFLQ96LU7 910 aa15.29■□□□□ 0.04
COPS7A-212ENST00000541866 PKMYT1Q99640 499 aa15.29■□□□□ 0.04
COPS7A-212ENST00000541866 C7orf25Q9BPX7 421 aa15.29■□□□□ 0.04
COPS7A-212ENST00000541866 SYT15Q9BQS2 421 aa15.29■□□□□ 0.04
COPS7A-212ENST00000541866 COL4A2P08572 1712 aa15.29■□□□□ 0.04
COPS7A-212ENST00000541866 PTPRJQ12913 1337 aa15.28■□□□□ 0.04
COPS7A-212ENST00000541866 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.28■□□□□ 0.04
COPS7A-212ENST00000541866 CLIC2O15247 247 aa15.28■□□□□ 0.04
COPS7A-212ENST00000541866 POLR2DO15514 142 aaKnown RBP15.28■□□□□ 0.04
COPS7A-212ENST00000541866 HRO43593 1189 aa15.28■□□□□ 0.04
COPS7A-212ENST00000541866 HCRTO43612 131 aa15.28■□□□□ 0.04
COPS7A-212ENST00000541866 ATP2C2O75185 946 aa15.28■□□□□ 0.04
COPS7A-212ENST00000541866 PAPSS2O95340 614 aaPredicted RBP15.28■□□□□ 0.04
COPS7A-212ENST00000541866 RETP07949 1114 aa15.28■□□□□ 0.04
COPS7A-212ENST00000541866 USP17L7P0C7H9 530 aa15.28■□□□□ 0.04
COPS7A-212ENST00000541866 LMO2P25791 158 aa15.28■□□□□ 0.04
COPS7A-212ENST00000541866 ANXA13P27216 316 aa15.28■□□□□ 0.04
COPS7A-212ENST00000541866 HOXD13P35453 343 aa15.28■□□□□ 0.04
COPS7A-212ENST00000541866 GRIK1P39086 918 aa15.28■□□□□ 0.04
COPS7A-212ENST00000541866 MAGEA11P43364 429 aa15.28■□□□□ 0.04
COPS7A-212ENST00000541866 ME1P48163 572 aa15.28■□□□□ 0.04
COPS7A-212ENST00000541866 CYP2J2P51589 502 aa15.28■□□□□ 0.04
COPS7A-212ENST00000541866 PSMC1P62191 440 aaKnown RBP15.28■□□□□ 0.04
COPS7A-212ENST00000541866 CYP27A1Q02318 531 aa15.28■□□□□ 0.04
COPS7A-212ENST00000541866 FAM160A1Q05DH4 1040 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms