RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 ADAM23O75077 832 aa10.59□□□□□ -0.71
CHFR-220ENST00000541817 F11P03951 625 aa10.59□□□□□ -0.71
CHFR-220ENST00000541817 CPA1P15085 419 aa10.59□□□□□ -0.71
CHFR-220ENST00000541817 WASP42768 502 aa10.59□□□□□ -0.71
CHFR-220ENST00000541817 YARSP54577 528 aaKnown RBP10.59□□□□□ -0.71
CHFR-220ENST00000541817 NLRP12P59046 1061 aa10.59□□□□□ -0.71
CHFR-220ENST00000541817 EXOSC10Q01780 885 aaKnown RBP10.59□□□□□ -0.71
CHFR-220ENST00000541817 VEPH1Q14D04 833 aa10.59□□□□□ -0.71
CHFR-220ENST00000541817 GAB4Q2WGN9 574 aa10.59□□□□□ -0.71
CHFR-220ENST00000541817 SEZ6Q53EL9 994 aa10.59□□□□□ -0.71
CHFR-220ENST00000541817 ZC2HC1CQ53FD0 456 aaPredicted RBP10.59□□□□□ -0.71
CHFR-220ENST00000541817 XKR4Q5GH76 650 aa10.59□□□□□ -0.71
CHFR-220ENST00000541817 MCTP1Q6DN14 999 aa10.59□□□□□ -0.71
CHFR-220ENST00000541817 PRICKLE2Q7Z3G6 844 aa10.59□□□□□ -0.71
CHFR-220ENST00000541817 KRT25Q7Z3Z0 450 aa10.59□□□□□ -0.71
CHFR-220ENST00000541817 POTEDQ86YR6 584 aa10.59□□□□□ -0.71
CHFR-220ENST00000541817 OSCP1Q8WVF1 389 aa10.59□□□□□ -0.71
CHFR-220ENST00000541817 ATP2A3Q93084 1043 aa10.59□□□□□ -0.71
CHFR-220ENST00000541817 INTS4Q96HW7 963 aaKnown RBP10.59□□□□□ -0.71
CHFR-220ENST00000541817 TMX3Q96JJ7 454 aa10.59□□□□□ -0.71
CHFR-220ENST00000541817 LSG1Q9H089 658 aaKnown RBP10.59□□□□□ -0.71
CHFR-220ENST00000541817 GAREM1Q9H706 876 aa10.59□□□□□ -0.71
CHFR-220ENST00000541817 TRPC7Q9HCX4 862 aa10.59□□□□□ -0.71
CHFR-220ENST00000541817 TM7SF3Q9NS93 570 aa10.59□□□□□ -0.71
CHFR-220ENST00000541817 SLC38A7Q9NVC3 462 aa10.59□□□□□ -0.71
CHFR-220ENST00000541817 MAGED2Q9UNF1 606 aaPredicted RBP10.59□□□□□ -0.71
CHFR-220ENST00000541817 CYP8B1Q9UNU6 501 aa10.59□□□□□ -0.71
CHFR-220ENST00000541817 FNDC3AQ9Y2H6 1198 aaKnown RBP10.59□□□□□ -0.71
CHFR-220ENST00000541817 AK5Q9Y6K8 562 aa10.59□□□□□ -0.71
CHFR-220ENST00000541817 ANK1P16157 1881 aa10.59□□□□□ -0.71
CHFR-220ENST00000541817 PTPRQQ9UMZ3 2332 aa10.58□□□□□ -0.72
CHFR-220ENST00000541817 USP9XQ93008 2570 aaPredicted RBP10.58□□□□□ -0.72
CHFR-220ENST00000541817 IGHV1OR15-9A0A0B4J2B8 117 aa10.58□□□□□ -0.72
CHFR-220ENST00000541817 A0A1W2PQD8 194 aa10.58□□□□□ -0.72
CHFR-220ENST00000541817 CAPN8A6NHC0 703 aa10.58□□□□□ -0.72
CHFR-220ENST00000541817 SCAMP3O14828 347 aaKnown RBP10.58□□□□□ -0.72
CHFR-220ENST00000541817 DKK1O94907 266 aa10.58□□□□□ -0.72
CHFR-220ENST00000541817 OAZ2O95190 189 aa10.58□□□□□ -0.72
CHFR-220ENST00000541817 CHRM1P11229 460 aaPredicted RBP10.58□□□□□ -0.72
CHFR-220ENST00000541817 HARSP12081 509 aaKnown RBP10.58□□□□□ -0.72
CHFR-220ENST00000541817 GABRG2P18507 467 aa10.58□□□□□ -0.72
CHFR-220ENST00000541817 ATP2B1P20020 1258 aa10.58□□□□□ -0.72
CHFR-220ENST00000541817 RPL9P32969 192 aaKnown RBP10.58□□□□□ -0.72
CHFR-220ENST00000541817 GRM5P41594 1212 aa10.58□□□□□ -0.72
CHFR-220ENST00000541817 GPR15P49685 360 aa10.58□□□□□ -0.72
CHFR-220ENST00000541817 MRPS21P82921 87 aaKnown RBP10.58□□□□□ -0.72
CHFR-220ENST00000541817 DMP1Q13316 513 aaPredicted RBP10.58□□□□□ -0.72
CHFR-220ENST00000541817 CUL4AQ13619 759 aa10.58□□□□□ -0.72
CHFR-220ENST00000541817 BYSLQ13895 437 aaKnown RBP10.58□□□□□ -0.72
CHFR-220ENST00000541817 ZNF77Q15935 545 aa10.58□□□□□ -0.72
CHFR-220ENST00000541817 KLHL40Q2TBA0 621 aa10.58□□□□□ -0.72
CHFR-220ENST00000541817 ADCK5Q3MIX3 580 aa10.58□□□□□ -0.72
CHFR-220ENST00000541817 SLC39A12Q504Y0 691 aa10.58□□□□□ -0.72
CHFR-220ENST00000541817 SDHAF4Q5VUM1 108 aa10.58□□□□□ -0.72
CHFR-220ENST00000541817 SLC36A4Q6YBV0 504 aa10.58□□□□□ -0.72
CHFR-220ENST00000541817 RABEPKQ7Z6M1 372 aa10.58□□□□□ -0.72
CHFR-220ENST00000541817 USP37Q86T82 979 aa10.58□□□□□ -0.72
CHFR-220ENST00000541817 BLIDQ8IZY5 108 aa10.58□□□□□ -0.72
CHFR-220ENST00000541817 DEPTORQ8TB45 409 aa10.58□□□□□ -0.72
CHFR-220ENST00000541817 BAHD1Q8TBE0 780 aaPredicted RBP10.58□□□□□ -0.72
CHFR-220ENST00000541817 NAF1Q96HR8 494 aaKnown RBP10.58□□□□□ -0.72
CHFR-220ENST00000541817 FAM20AQ96MK3 541 aa10.58□□□□□ -0.72
CHFR-220ENST00000541817 CCDC94Q9BW85 323 aaPredicted RBP10.58□□□□□ -0.72
CHFR-220ENST00000541817 SLC6A17Q9H1V8 727 aa10.58□□□□□ -0.72
CHFR-220ENST00000541817 CDT1Q9H211 546 aa10.58□□□□□ -0.72
CHFR-220ENST00000541817 KIF9Q9HAQ2 790 aa10.58□□□□□ -0.72
CHFR-220ENST00000541817 ANKEF1Q9NU02 776 aa10.58□□□□□ -0.72
CHFR-220ENST00000541817 CALCOCO1Q9P1Z2 691 aa10.58□□□□□ -0.72
CHFR-220ENST00000541817 PCDHA4Q9UN74 947 aa10.58□□□□□ -0.72
CHFR-220ENST00000541817 CITO14578 2027 aa10.58□□□□□ -0.72
CHFR-220ENST00000541817 MYOFQ9NZM1 2061 aa10.57□□□□□ -0.72
CHFR-220ENST00000541817 OR6C75A6NL08 312 aa10.57□□□□□ -0.72
CHFR-220ENST00000541817 M0QZQ0 153 aa10.57□□□□□ -0.72
CHFR-220ENST00000541817 M0R2N6 131 aa10.57□□□□□ -0.72
CHFR-220ENST00000541817 ERVH48-1M5A8F1 160 aa10.57□□□□□ -0.72
CHFR-220ENST00000541817 CILPO75339 1184 aa10.57□□□□□ -0.72
CHFR-220ENST00000541817 XRCC6P12956 609 aaKnown RBP eCLIP10.57□□□□□ -0.726e-7■■■■■ 28.8
CHFR-220ENST00000541817 GUCY2FP51841 1108 aa10.57□□□□□ -0.72
CHFR-220ENST00000541817 BNC1Q01954 994 aa10.57□□□□□ -0.72
CHFR-220ENST00000541817 KDSRQ06136 332 aa10.57□□□□□ -0.72
CHFR-220ENST00000541817 NR1H3Q13133 447 aa10.57□□□□□ -0.72
CHFR-220ENST00000541817 NECTIN1Q15223 517 aa10.57□□□□□ -0.72
CHFR-220ENST00000541817 ARHGAP40Q5TG30 622 aa10.57□□□□□ -0.72
CHFR-220ENST00000541817 OVOS1Q6IE37 1185 aa10.57□□□□□ -0.72
CHFR-220ENST00000541817 MOXD1Q6UVY6 613 aa10.57□□□□□ -0.72
CHFR-220ENST00000541817 DSTYKQ6XUX3 929 aa10.57□□□□□ -0.72
CHFR-220ENST00000541817 OR10T2Q8NGX3 314 aa10.57□□□□□ -0.72
CHFR-220ENST00000541817 AIFM3Q96NN9 605 aa10.57□□□□□ -0.72
CHFR-220ENST00000541817 C2orf40Q9H1Z8 148 aa10.57□□□□□ -0.72
CHFR-220ENST00000541817 GRPEL1Q9HAV7 217 aa10.57□□□□□ -0.72
CHFR-220ENST00000541817 CPNE5Q9HCH3 593 aa10.57□□□□□ -0.72
CHFR-220ENST00000541817 TOPORSQ9NS56 1045 aaPredicted RBP10.57□□□□□ -0.72
CHFR-220ENST00000541817 MYO18AQ92614 2054 aaKnown RBP10.57□□□□□ -0.72
CHFR-220ENST00000541817 MYLKQ15746 1914 aa10.56□□□□□ -0.72
CHFR-220ENST00000541817 TEX15Q9BXT5 2789 aa10.56□□□□□ -0.72
CHFR-220ENST00000541817 BTBD18B2RXH4 712 aa10.56□□□□□ -0.72
CHFR-220ENST00000541817 PPEF2O14830 753 aa10.56□□□□□ -0.72
CHFR-220ENST00000541817 CCNT1O60563 726 aaKnown RBP10.56□□□□□ -0.72
CHFR-220ENST00000541817 NTRK1P04629 796 aa10.56□□□□□ -0.72
CHFR-220ENST00000541817 C6P13671 934 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms