RNA–Protein interactions for RNA: ENST00000541640.5

PRKAB1-206, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,303 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-206ENST00000541640 SDCBP2Q9H190 292 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 PPCSQ9HAB8 311 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 UBN1Q9NPG3 1134 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 ADARB2Q9NS39 739 aaKnown RBP13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 NKIRAS1Q9NYS0 192 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 TJP2Q9UDY2 1190 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 MCM3APO60318 1980 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 SGK1O00141 431 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 GPR25O00155 361 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 C22orf31O95567 290 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 GH1P01241 217 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 NFICP08651 508 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 IQCF3P0C7M6 154 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 TXNP10599 105 aaKnown RBP13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 IL1R2P27930 398 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 TMED2Q15363 201 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 Q3C1V9 767 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 NUGGCQ68CJ6 796 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 BBS12Q6ZW61 710 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 CENPUQ71F23 418 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 TRABD2AQ86V40 505 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 FUKQ8N0W3 1084 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 SLC4A11Q8NBS3 891 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 CXorf38Q8TB03 319 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 PRCCQ92733 491 aaPredicted RBP13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 SGSM3Q96HU1 749 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 CPXM1Q96SM3 734 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 VRTNQ9H8Y1 702 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.95□□□□□ -0.188e-9■■□□□ 13.3
PRKAB1-206ENST00000541640 KCNH4Q9UQ05 1017 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 FARP1Q9Y4F1 1045 aaPredicted RBP13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 SPDYE5A6NIY4 337 aa13.94□□□□□ -0.18
PRKAB1-206ENST00000541640 LACTBL1A8MY62 500 aa13.94□□□□□ -0.18
PRKAB1-206ENST00000541640 RASA4BC9J798 803 aa13.94□□□□□ -0.18
PRKAB1-206ENST00000541640 RASA4O43374 803 aa13.94□□□□□ -0.18
PRKAB1-206ENST00000541640 ATP2C2O75185 946 aa13.94□□□□□ -0.18
PRKAB1-206ENST00000541640 MCF2P10911 925 aa13.94□□□□□ -0.18
PRKAB1-206ENST00000541640 KDELR1P24390 212 aa13.94□□□□□ -0.18
PRKAB1-206ENST00000541640 STX2P32856 288 aa13.94□□□□□ -0.18
PRKAB1-206ENST00000541640 CDH8P55286 799 aa13.94□□□□□ -0.18
PRKAB1-206ENST00000541640 PLCB3Q01970 1234 aa13.94□□□□□ -0.18
PRKAB1-206ENST00000541640 TNFAIP2Q03169 654 aa13.94□□□□□ -0.18
PRKAB1-206ENST00000541640 PTPN11Q06124 597 aaPredicted RBP13.94□□□□□ -0.18
PRKAB1-206ENST00000541640 RASA2Q15283 850 aa13.94□□□□□ -0.18
PRKAB1-206ENST00000541640 IFNLR1Q8IU57 520 aaPredicted RBP13.94□□□□□ -0.18
PRKAB1-206ENST00000541640 KIAA0319LQ8IZA0 1049 aa13.94□□□□□ -0.18
PRKAB1-206ENST00000541640 GDAP1Q8TB36 358 aa13.94□□□□□ -0.18
PRKAB1-206ENST00000541640 ZWILCHQ9H900 591 aa13.94□□□□□ -0.18
PRKAB1-206ENST00000541640 IFT122Q9HBG6 1241 aa13.94□□□□□ -0.18
PRKAB1-206ENST00000541640 MLXIPLQ9NP71 852 aa13.94□□□□□ -0.18
PRKAB1-206ENST00000541640 HAUS2Q9NVX0 235 aa13.94□□□□□ -0.18
PRKAB1-206ENST00000541640 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.94□□□□□ -0.18
PRKAB1-206ENST00000541640 EVPLQ92817 2033 aa13.94□□□□□ -0.18
PRKAB1-206ENST00000541640 CILPO75339 1184 aa13.93□□□□□ -0.18
PRKAB1-206ENST00000541640 SUN1O94901 812 aa13.93□□□□□ -0.18
PRKAB1-206ENST00000541640 ITGBL1O95965 494 aaPredicted RBP13.93□□□□□ -0.18
PRKAB1-206ENST00000541640 ERBB2P04626 1255 aa13.93□□□□□ -0.18
PRKAB1-206ENST00000541640 ATICP31939 592 aa13.93□□□□□ -0.18
PRKAB1-206ENST00000541640 PHKA2P46019 1235 aa13.93□□□□□ -0.18
PRKAB1-206ENST00000541640 GABRB2P47870 512 aa13.93□□□□□ -0.18
PRKAB1-206ENST00000541640 SLC18A1P54219 525 aa13.93□□□□□ -0.18
PRKAB1-206ENST00000541640 OTUD4Q01804 1114 aaKnown RBP13.93□□□□□ -0.18
PRKAB1-206ENST00000541640 TTLL4Q14679 1199 aa13.93□□□□□ -0.18
PRKAB1-206ENST00000541640 FASTKD3Q14CZ7 662 aaKnown RBP13.93□□□□□ -0.18
PRKAB1-206ENST00000541640 ACAP1Q15027 740 aa13.93□□□□□ -0.18
PRKAB1-206ENST00000541640 ZNF484Q5JVG2 852 aa13.93□□□□□ -0.18
PRKAB1-206ENST00000541640 ANKRD13AQ8IZ07 590 aa13.93□□□□□ -0.18
PRKAB1-206ENST00000541640 ACTL9Q8TC94 416 aa13.93□□□□□ -0.18
PRKAB1-206ENST00000541640 MCRS1Q96EZ8 462 aa13.93□□□□□ -0.18
PRKAB1-206ENST00000541640 CLMNQ96JQ2 1002 aa13.93□□□□□ -0.18
PRKAB1-206ENST00000541640 TGS1Q96RS0 853 aaKnown RBP13.93□□□□□ -0.18
PRKAB1-206ENST00000541640 MROH8Q9H579 483 aa13.93□□□□□ -0.18
PRKAB1-206ENST00000541640 CYP3A43Q9HB55 503 aa13.93□□□□□ -0.18
PRKAB1-206ENST00000541640 METTL5Q9NRN9 209 aaKnown RBP13.93□□□□□ -0.18
PRKAB1-206ENST00000541640 ERAP1Q9NZ08 941 aa13.93□□□□□ -0.18
PRKAB1-206ENST00000541640 FAM47DPA6NHR8 397 aa13.93□□□□□ -0.18
PRKAB1-206ENST00000541640 CST8O60676 142 aa13.93□□□□□ -0.18
PRKAB1-206ENST00000541640 ITGB3P05106 788 aa13.93□□□□□ -0.18
PRKAB1-206ENST00000541640 STAG3L1P0CL83 205 aa13.93□□□□□ -0.18
PRKAB1-206ENST00000541640 SMTNL2Q2TAL5 461 aa13.93□□□□□ -0.18
PRKAB1-206ENST00000541640 JADE1Q6IE81 842 aa13.93□□□□□ -0.18
PRKAB1-206ENST00000541640 CYB5D1Q6P9G0 228 aa13.93□□□□□ -0.18
PRKAB1-206ENST00000541640 ZBED8Q8IZ13 594 aa13.93□□□□□ -0.18
PRKAB1-206ENST00000541640 ZBTB10Q96DT7 871 aa13.93□□□□□ -0.18
PRKAB1-206ENST00000541640 TMEM176AQ96HP8 235 aa13.93□□□□□ -0.18
PRKAB1-206ENST00000541640 TWNKQ96RR1 684 aa13.93□□□□□ -0.18
PRKAB1-206ENST00000541640 PLCD4Q9BRC7 762 aa13.93□□□□□ -0.18
PRKAB1-206ENST00000541640 ELOVL4Q9GZR5 314 aa13.93□□□□□ -0.18
PRKAB1-206ENST00000541640 RNPEPQ9H4A4 650 aa13.93□□□□□ -0.18
PRKAB1-206ENST00000541640 ASB7Q9H672 318 aa13.93□□□□□ -0.18
PRKAB1-206ENST00000541640 SMYD3Q9H7B4 428 aa13.93□□□□□ -0.18
PRKAB1-206ENST00000541640 SENP1Q9P0U3 644 aa13.93□□□□□ -0.18
PRKAB1-206ENST00000541640 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.93□□□□□ -0.186e-7■■■□□ 15.8
PRKAB1-206ENST00000541640 PRPF4O43172 522 aaKnown RBP eCLIP13.92□□□□□ -0.18
PRKAB1-206ENST00000541640 IFNB1P01574 187 aa13.92□□□□□ -0.18
PRKAB1-206ENST00000541640 IL9RQ01113 521 aa13.92□□□□□ -0.18
PRKAB1-206ENST00000541640 SF3A3Q12874 501 aaKnown RBP eCLIP13.92□□□□□ -0.183e-7■■■□□ 18.2
PRKAB1-206ENST00000541640 MYO1EQ12965 1108 aa13.92□□□□□ -0.18
PRKAB1-206ENST00000541640 PPIL2Q13356 520 aa13.92□□□□□ -0.18
PRKAB1-206ENST00000541640 MOGSQ13724 837 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms