RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 TLK1Q9UKI8 766 aa10□□□□□ -0.81
TTC39C-203ENST00000540918 TRPM3Q9HCF6 1732 aaPredicted RBP10□□□□□ -0.81
TTC39C-203ENST00000540918 ARHGEF37A1IGU5 675 aa10□□□□□ -0.81
TTC39C-203ENST00000540918 EEF2KO00418 725 aaKnown RBP10□□□□□ -0.81
TTC39C-203ENST00000540918 CLGNO14967 610 aa10□□□□□ -0.81
TTC39C-203ENST00000540918 PMPCBO75439 489 aa10□□□□□ -0.81
TTC39C-203ENST00000540918 TROVE2P10155 538 aaKnown RBP eCLIP10□□□□□ -0.81
TTC39C-203ENST00000540918 PCSK1P29120 753 aa10□□□□□ -0.81
TTC39C-203ENST00000540918 RFC1P35251 1148 aaPredicted RBP10□□□□□ -0.81
TTC39C-203ENST00000540918 COILP38432 576 aaPredicted RBP10□□□□□ -0.81
TTC39C-203ENST00000540918 IL9RQ01113 521 aa10□□□□□ -0.81
TTC39C-203ENST00000540918 SKIV2LQ15477 1246 aaKnown RBP10□□□□□ -0.81
TTC39C-203ENST00000540918 CLEC16AQ2KHT3 1053 aa10□□□□□ -0.81
TTC39C-203ENST00000540918 DCAF4L1Q3SXM0 396 aa10□□□□□ -0.81
TTC39C-203ENST00000540918 IRF2BP2Q7Z5L9 587 aa10□□□□□ -0.81
TTC39C-203ENST00000540918 RCOR2Q8IZ40 523 aa10□□□□□ -0.81
TTC39C-203ENST00000540918 TTC13Q8NBP0 860 aa10□□□□□ -0.81
TTC39C-203ENST00000540918 CD99L2Q8TCZ2 262 aa10□□□□□ -0.81
TTC39C-203ENST00000540918 PWWP2AQ96N64 755 aa10□□□□□ -0.81
TTC39C-203ENST00000540918 DEFB118Q96PH6 123 aa10□□□□□ -0.81
TTC39C-203ENST00000540918 LPIN3Q9BQK8 851 aa10□□□□□ -0.81
TTC39C-203ENST00000540918 B3GNT5Q9BYG0 378 aa10□□□□□ -0.81
TTC39C-203ENST00000540918 SP110Q9HB58 689 aa10□□□□□ -0.81
TTC39C-203ENST00000540918 XPO7Q9UIA9 1087 aaKnown RBP10□□□□□ -0.81
TTC39C-203ENST00000540918 ATRNL1Q5VV63 1379 aa10□□□□□ -0.81
TTC39C-203ENST00000540918 CNTNAP2Q9UHC6 1331 aa10□□□□□ -0.81
TTC39C-203ENST00000540918 TBKBP1A7MCY6 615 aa10□□□□□ -0.81
TTC39C-203ENST00000540918 KPNA7A9QM74 516 aa10□□□□□ -0.81
TTC39C-203ENST00000540918 GPR25O00155 361 aa10□□□□□ -0.81
TTC39C-203ENST00000540918 KCNK1O00180 336 aa10□□□□□ -0.81
TTC39C-203ENST00000540918 NOL4O94818 638 aa10□□□□□ -0.81
TTC39C-203ENST00000540918 APOEP02649 317 aa10□□□□□ -0.81
TTC39C-203ENST00000540918 GBP1P32455 592 aa10□□□□□ -0.81
TTC39C-203ENST00000540918 SLC1A1P43005 524 aa10□□□□□ -0.81
TTC39C-203ENST00000540918 MEI1Q5TIA1 1274 aa10□□□□□ -0.81
TTC39C-203ENST00000540918 MFSD7Q6UXD7 560 aa10□□□□□ -0.81
TTC39C-203ENST00000540918 ZPBP2Q6X784 338 aa10□□□□□ -0.81
TTC39C-203ENST00000540918 CPNE8Q86YQ8 564 aa10□□□□□ -0.81
TTC39C-203ENST00000540918 BBS5Q8N3I7 341 aa10□□□□□ -0.81
TTC39C-203ENST00000540918 RAPGEF5Q92565 580 aa10□□□□□ -0.81
TTC39C-203ENST00000540918 ARL8AQ96BM9 186 aa10□□□□□ -0.81
TTC39C-203ENST00000540918 HMX1Q9NP08 348 aaPredicted RBP10□□□□□ -0.81
TTC39C-203ENST00000540918 AJAP1Q9UKB5 411 aaPredicted RBP10□□□□□ -0.81
TTC39C-203ENST00000540918 SYNPO2Q9UMS6 1093 aa10□□□□□ -0.81
TTC39C-203ENST00000540918 ST3GAL5Q9UNP4 418 aa10□□□□□ -0.81
TTC39C-203ENST00000540918 DHX15O43143 795 aaKnown RBP9.99□□□□□ -0.81
TTC39C-203ENST00000540918 CTIFO43310 598 aaKnown RBP9.99□□□□□ -0.81
TTC39C-203ENST00000540918 SH3BP5O60239 455 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 MICAL2O94851 1124 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 ADSSP30520 456 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 HNRNPH2P55795 449 aaKnown RBP9.99□□□□□ -0.81
TTC39C-203ENST00000540918 CDC42EP1Q00587 391 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 EFEMP1Q12805 493 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 RPS6KA2Q15349 733 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 MEA1Q16626 185 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 CTXN3Q4LDR2 81 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 FAM171A1Q5VUB5 890 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 CCDC62Q6P9F0 684 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 TFAP2DQ7Z6R9 452 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 CROCCP2Q86T23 111 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 TMEM139Q8IV31 216 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 TMEM130Q8N3G9 435 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 SAMD3Q8N6K7 520 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 EFHBQ8N7U6 833 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 IPMKQ8NFU5 416 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 RAB3IL1Q8TBN0 382 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 GANCQ8TET4 914 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 SH3TC2Q8TF17 1288 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 HDAC11Q96DB2 347 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 TMEM169Q96HH4 297 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 MAML3Q96JK9 1138 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 EIF2AQ9BY44 585 aaKnown RBP9.99□□□□□ -0.81
TTC39C-203ENST00000540918 UNKQ9C0B0 810 aaKnown RBP9.99□□□□□ -0.81
TTC39C-203ENST00000540918 CARD9Q9H257 536 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 R3HDMLQ9H3Y0 253 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 ANKZF1Q9H8Y5 726 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 CHST7Q9NS84 486 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 SLC38A7Q9NVC3 462 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 MARCOQ9UEW3 520 aaPredicted RBP9.99□□□□□ -0.81
TTC39C-203ENST00000540918 MYPNQ86TC9 1320 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 ADGRA3Q8IWK6 1321 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 TSPAN3O60637 253 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 BRCC3P46736 316 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 PTENP60484 403 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 CRHR2Q13324 411 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 C3orf62Q6ZUJ4 267 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 CCNYL1Q8N7R7 359 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 PCSK9Q8NBP7 692 aaKnown RBP9.99□□□□□ -0.81
TTC39C-203ENST00000540918 PCDHB18PQ96TA0 734 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 ATXN3LQ9H3M9 355 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 TUBGCP4Q9UGJ1 667 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 LRRC37A3O60309 1634 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 UBA6A0AVT1 1052 aaPredicted RBP9.99□□□□□ -0.81
TTC39C-203ENST00000540918 H3BRJ5 948 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 USP17L7P0C7H9 530 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 VDRP11473 427 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 ETS1P14921 441 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 SNRPFP62306 86 aaKnown RBP9.99□□□□□ -0.81
TTC39C-203ENST00000540918 C6orf118Q5T5N4 469 aa9.99□□□□□ -0.81
TTC39C-203ENST00000540918 PAPD7Q5XG87 772 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms