RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 LRP3O75074 770 aa17.44■□□□□ 0.38
TRIM65-203ENST00000540812 NOL4O94818 638 aa17.44■□□□□ 0.38
TRIM65-203ENST00000540812 LDHAP00338 332 aaKnown RBP17.44■□□□□ 0.38
TRIM65-203ENST00000540812 EGFP01133 1207 aa17.44■□□□□ 0.38
TRIM65-203ENST00000540812 HOXA6P31267 233 aa17.44■□□□□ 0.38
TRIM65-203ENST00000540812 RBP5P82980 135 aa17.44■□□□□ 0.38
TRIM65-203ENST00000540812 MYL7Q01449 175 aa17.44■□□□□ 0.38
TRIM65-203ENST00000540812 CEP68Q76N32 757 aa17.44■□□□□ 0.38
TRIM65-203ENST00000540812 TMEM86AQ8N2M4 240 aa17.44■□□□□ 0.38
TRIM65-203ENST00000540812 GLIS3Q8NEA6 775 aa17.44■□□□□ 0.38
TRIM65-203ENST00000540812 HPS3Q969F9 1004 aa17.44■□□□□ 0.38
TRIM65-203ENST00000540812 SLC22A12Q96S37 553 aa17.44■□□□□ 0.38
TRIM65-203ENST00000540812 KIF9Q9HAQ2 790 aa17.44■□□□□ 0.38
TRIM65-203ENST00000540812 FBRSL1Q9HCM7 1045 aaKnown RBP17.44■□□□□ 0.38
TRIM65-203ENST00000540812 ABCB6Q9NP58 842 aa17.44■□□□□ 0.38
TRIM65-203ENST00000540812 GDAP2Q9NXN4 497 aa17.44■□□□□ 0.38
TRIM65-203ENST00000540812 MTMR6Q9Y217 621 aa17.44■□□□□ 0.38
TRIM65-203ENST00000540812 ACACBO00763 2458 aa17.44■□□□□ 0.38
TRIM65-203ENST00000540812 PTPRJQ12913 1337 aa17.44■□□□□ 0.38
TRIM65-203ENST00000540812 OBSL1O75147 1896 aa17.44■□□□□ 0.38
TRIM65-203ENST00000540812 ATG2BQ96BY7 2078 aa17.43■□□□□ 0.38
TRIM65-203ENST00000540812 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.43■□□□□ 0.38
TRIM65-203ENST00000540812 TRDMT1O14717 391 aaKnown RBP17.43■□□□□ 0.38
TRIM65-203ENST00000540812 GABRDO14764 452 aa17.43■□□□□ 0.38
TRIM65-203ENST00000540812 RPL10AP62906 217 aaKnown RBP17.43■□□□□ 0.38
TRIM65-203ENST00000540812 GRSF1Q12849 480 aaKnown RBP eCLIP17.43■□□□□ 0.38
TRIM65-203ENST00000540812 ALCAMQ13740 583 aa17.43■□□□□ 0.38
TRIM65-203ENST00000540812 ZNF268Q14587 947 aaPredicted RBP17.43■□□□□ 0.38
TRIM65-203ENST00000540812 SLC39A14Q15043 492 aa17.43■□□□□ 0.38
TRIM65-203ENST00000540812 SOWAHAQ2M3V2 549 aa17.43■□□□□ 0.38
TRIM65-203ENST00000540812 PRR23CQ6ZRP0 262 aa17.43■□□□□ 0.38
TRIM65-203ENST00000540812 ADGRF2Q8IZF7 708 aa17.43■□□□□ 0.38
TRIM65-203ENST00000540812 TOP6BLQ8N6T0 577 aa17.43■□□□□ 0.38
TRIM65-203ENST00000540812 OR5B17Q8NGF7 314 aa17.43■□□□□ 0.38
TRIM65-203ENST00000540812 NETO1Q8TDF5 533 aa17.43■□□□□ 0.38
TRIM65-203ENST00000540812 MORC2Q9Y6X9 1032 aaPredicted RBP17.43■□□□□ 0.38
TRIM65-203ENST00000540812 ZNF638Q14966 1978 aaKnown RBP17.42■□□□□ 0.38
TRIM65-203ENST00000540812 SOBPA7XYQ1 873 aa17.42■□□□□ 0.38
TRIM65-203ENST00000540812 GDF9O60383 454 aa17.42■□□□□ 0.38
TRIM65-203ENST00000540812 ATP2C2O75185 946 aa17.42■□□□□ 0.38
TRIM65-203ENST00000540812 TMEM191BP0C7N4 346 aa17.42■□□□□ 0.38
TRIM65-203ENST00000540812 CSRP2Q16527 193 aa17.42■□□□□ 0.38
TRIM65-203ENST00000540812 CC2D1AQ6P1N0 951 aaPredicted RBP17.42■□□□□ 0.38
TRIM65-203ENST00000540812 SPATA2LQ8IUW3 424 aaPredicted RBP17.42■□□□□ 0.38
TRIM65-203ENST00000540812 GPD1LQ8N335 351 aa17.42■□□□□ 0.38
TRIM65-203ENST00000540812 PDILTQ8N807 584 aa17.42■□□□□ 0.38
TRIM65-203ENST00000540812 TRMT2BQ96GJ1 504 aaKnown RBP17.42■□□□□ 0.38
TRIM65-203ENST00000540812 MYRFLQ96LU7 910 aa17.42■□□□□ 0.38
TRIM65-203ENST00000540812 CYP2S1Q96SQ9 504 aa17.42■□□□□ 0.38
TRIM65-203ENST00000540812 TMEM206Q9H813 350 aa17.42■□□□□ 0.38
TRIM65-203ENST00000540812 TRPC7Q9HCX4 862 aa17.42■□□□□ 0.38
TRIM65-203ENST00000540812 FOXD4L1Q9NU39 408 aa17.42■□□□□ 0.38
TRIM65-203ENST00000540812 INTS13Q9NVM9 706 aa17.42■□□□□ 0.38
TRIM65-203ENST00000540812 UXTQ9UBK9 157 aaPredicted RBP17.42■□□□□ 0.38
TRIM65-203ENST00000540812 CACNA1BQ00975 2339 aa17.41■□□□□ 0.38
TRIM65-203ENST00000540812 SLC30A4O14863 429 aa17.41■□□□□ 0.38
TRIM65-203ENST00000540812 RNF40O75150 1001 aa17.41■□□□□ 0.38
TRIM65-203ENST00000540812 LMO2P25791 158 aa17.41■□□□□ 0.38
TRIM65-203ENST00000540812 GJA4P35212 333 aa17.41■□□□□ 0.38
TRIM65-203ENST00000540812 HOXD13P35453 343 aa17.41■□□□□ 0.38
TRIM65-203ENST00000540812 LHX1P48742 406 aa17.41■□□□□ 0.38
TRIM65-203ENST00000540812 GALK1P51570 392 aa17.41■□□□□ 0.38
TRIM65-203ENST00000540812 PSMC1P62191 440 aaKnown RBP17.41■□□□□ 0.38
TRIM65-203ENST00000540812 MTF1Q14872 753 aa17.41■□□□□ 0.38
TRIM65-203ENST00000540812 PDGFRLQ15198 375 aa17.41■□□□□ 0.38
TRIM65-203ENST00000540812 ZNF77Q15935 545 aa17.41■□□□□ 0.38
TRIM65-203ENST00000540812 CFAP221Q4G0U5 840 aa17.41■□□□□ 0.38
TRIM65-203ENST00000540812 FAM171BQ6P995 826 aa17.41■□□□□ 0.38
TRIM65-203ENST00000540812 LIMS2Q7Z4I7 341 aa17.41■□□□□ 0.38
TRIM65-203ENST00000540812 CBWD2Q8IUF1 395 aa17.41■□□□□ 0.38
TRIM65-203ENST00000540812 SCN4BQ8IWT1 228 aa17.41■□□□□ 0.38
TRIM65-203ENST00000540812 TTC16Q8NEE8 873 aa17.41■□□□□ 0.38
TRIM65-203ENST00000540812 SPATA18Q8TC71 538 aa17.41■□□□□ 0.38
TRIM65-203ENST00000540812 KBTBD7Q8WVZ9 684 aa17.41■□□□□ 0.38
TRIM65-203ENST00000540812 CNTNAP3BQ96NU0 1288 aa17.41■□□□□ 0.38
TRIM65-203ENST00000540812 CNTNAP3Q9BZ76 1288 aa17.41■□□□□ 0.38
TRIM65-203ENST00000540812 CNOT1A5YKK6 2376 aaKnown RBP17.4■□□□□ 0.38
TRIM65-203ENST00000540812 TRAV19A0A0A6YYK7 116 aa17.4■□□□□ 0.38
TRIM65-203ENST00000540812 AXIN1O15169 862 aa17.4■□□□□ 0.38
TRIM65-203ENST00000540812 PCSK1P29120 753 aa17.4■□□□□ 0.38
TRIM65-203ENST00000540812 FAM160A1Q05DH4 1040 aa17.4■□□□□ 0.38
TRIM65-203ENST00000540812 USP4Q13107 963 aa17.4■□□□□ 0.38
TRIM65-203ENST00000540812 CCDC6Q16204 474 aa17.4■□□□□ 0.38
TRIM65-203ENST00000540812 KBTBD6Q86V97 674 aa17.4■□□□□ 0.38
TRIM65-203ENST00000540812 CCDC65Q8IXS2 484 aa17.4■□□□□ 0.38
TRIM65-203ENST00000540812 OSCP1Q8WVF1 389 aa17.4■□□□□ 0.38
TRIM65-203ENST00000540812 GAB3Q8WWW8 586 aa17.4■□□□□ 0.38
TRIM65-203ENST00000540812 EZH1Q92800 747 aaPredicted RBP17.4■□□□□ 0.38
TRIM65-203ENST00000540812 MYLPFQ96A32 169 aa17.4■□□□□ 0.38
TRIM65-203ENST00000540812 FUBP3Q96I24 572 aaKnown RBP eCLIP17.4■□□□□ 0.38
TRIM65-203ENST00000540812 HPDLQ96IR7 371 aa17.4■□□□□ 0.38
TRIM65-203ENST00000540812 ANKRD36BP1Q96IX9 119 aa17.4■□□□□ 0.38
TRIM65-203ENST00000540812 SYT15Q9BQS2 421 aa17.4■□□□□ 0.38
TRIM65-203ENST00000540812 ECT2Q9H8V3 914 aa17.4■□□□□ 0.38
TRIM65-203ENST00000540812 CRTAC1Q9NQ79 661 aa17.4■□□□□ 0.38
TRIM65-203ENST00000540812 DUS2Q9NX74 493 aaKnown RBP17.4■□□□□ 0.38
TRIM65-203ENST00000540812 GCNT4Q9P109 453 aa17.4■□□□□ 0.38
TRIM65-203ENST00000540812 SLC8A2Q9UPR5 921 aa17.4■□□□□ 0.38
TRIM65-203ENST00000540812 WNT6Q9Y6F9 365 aa17.4■□□□□ 0.38
TRIM65-203ENST00000540812 RALGAPA1Q6GYQ0 2036 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms