RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 SLC2A14Q8TDB8 520 aa25.93■■□□□ 1.74
TTC3-225ENST00000540756 PIWIL1Q96J94 861 aaKnown RBP25.93■■□□□ 1.74
TTC3-225ENST00000540756 HINFPQ9BQA5 517 aa25.93■■□□□ 1.74
TTC3-225ENST00000540756 USTQ9Y2C2 406 aa25.93■■□□□ 1.74
TTC3-225ENST00000540756 INPPL1O15357 1258 aa25.93■■□□□ 1.74
TTC3-225ENST00000540756 CTNNA1P35221 906 aaKnown RBP25.93■■□□□ 1.74
TTC3-225ENST00000540756 RFC1P35251 1148 aaPredicted RBP25.93■■□□□ 1.74
TTC3-225ENST00000540756 AARSP49588 968 aaKnown RBP eCLIP25.93■■□□□ 1.745e-6■■■□□ 16
TTC3-225ENST00000540756 GATMP50440 423 aa25.93■■□□□ 1.74
TTC3-225ENST00000540756 PDE4CQ08493 712 aa25.93■■□□□ 1.74
TTC3-225ENST00000540756 KCTD19Q17RG1 926 aaPredicted RBP25.93■■□□□ 1.74
TTC3-225ENST00000540756 ARHGAP17Q68EM7 881 aa25.93■■□□□ 1.74
TTC3-225ENST00000540756 DCUN1D2Q6PH85 259 aa25.93■■□□□ 1.74
TTC3-225ENST00000540756 RASGEF1CQ8N431 466 aa25.93■■□□□ 1.74
TTC3-225ENST00000540756 B3GALNT2Q8NCR0 500 aa25.93■■□□□ 1.74
TTC3-225ENST00000540756 ACTRT1Q8TDG2 376 aa25.93■■□□□ 1.74
TTC3-225ENST00000540756 PNKPQ96T60 521 aa25.93■■□□□ 1.74
TTC3-225ENST00000540756 SELENOOQ9BVL4 669 aa25.93■■□□□ 1.74
TTC3-225ENST00000540756 AP1M1Q9BXS5 423 aa25.93■■□□□ 1.74
TTC3-225ENST00000540756 PARD6BQ9BYG5 372 aa25.93■■□□□ 1.74
TTC3-225ENST00000540756 DDX43Q9NXZ2 648 aaKnown RBP25.93■■□□□ 1.74
TTC3-225ENST00000540756 RNF14Q9UBS8 474 aa25.93■■□□□ 1.74
TTC3-225ENST00000540756 MIF4GDA9UHW6 222 aaKnown RBP25.92■■□□□ 1.74
TTC3-225ENST00000540756 CLDN5O00501 218 aa25.92■■□□□ 1.74
TTC3-225ENST00000540756 COL6A1P12109 1028 aa25.92■■□□□ 1.74
TTC3-225ENST00000540756 TCF4P15884 667 aa25.92■■□□□ 1.74
TTC3-225ENST00000540756 GABRB2P47870 512 aa25.92■■□□□ 1.74
TTC3-225ENST00000540756 GPR161Q8N6U8 529 aaKnown RBP25.92■■□□□ 1.74
TTC3-225ENST00000540756 EMC1Q8N766 993 aa25.92■■□□□ 1.74
TTC3-225ENST00000540756 SLC35F5Q8WV83 523 aa25.92■■□□□ 1.74
TTC3-225ENST00000540756 RPGRIP1Q96KN7 1286 aa25.92■■□□□ 1.74
TTC3-225ENST00000540756 RNPC3Q96LT9 517 aaKnown RBP25.92■■□□□ 1.74
TTC3-225ENST00000540756 STRIP2Q9ULQ0 834 aa25.92■■□□□ 1.74
TTC3-225ENST00000540756 PCDHA3Q9Y5H8 950 aa25.92■■□□□ 1.74
TTC3-225ENST00000540756 TANC1Q9C0D5 1861 aa25.92■■□□□ 1.74
TTC3-225ENST00000540756 F8VP50 259 aa25.92■■□□□ 1.74
TTC3-225ENST00000540756 PYGMP11217 842 aa25.92■■□□□ 1.74
TTC3-225ENST00000540756 TAS2R40P59535 323 aa25.92■■□□□ 1.74
TTC3-225ENST00000540756 LLGL1Q15334 1064 aa25.92■■□□□ 1.74
TTC3-225ENST00000540756 FBXO38Q6PIJ6 1188 aa25.92■■□□□ 1.74
TTC3-225ENST00000540756 DEFB128Q7Z7B8 93 aa25.92■■□□□ 1.74
TTC3-225ENST00000540756 UBL4BQ8N7F7 174 aa25.92■■□□□ 1.74
TTC3-225ENST00000540756 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.92■■□□□ 1.743e-8■■□□□ 11.5
TTC3-225ENST00000540756 CARD9Q9H257 536 aa25.92■■□□□ 1.74
TTC3-225ENST00000540756 METTL5Q9NRN9 209 aaKnown RBP25.92■■□□□ 1.74
TTC3-225ENST00000540756 NR2E1Q9Y466 385 aa25.92■■□□□ 1.74
TTC3-225ENST00000540756 DCDC2CA8MYV0 355 aa25.91■■□□□ 1.74
TTC3-225ENST00000540756 FGGP02679 453 aa25.91■■□□□ 1.74
TTC3-225ENST00000540756 STILQ15468 1287 aa25.91■■□□□ 1.74
TTC3-225ENST00000540756 NOMO2Q5JPE7 1267 aa25.91■■□□□ 1.74
TTC3-225ENST00000540756 ADAT2Q7Z6V5 191 aaKnown RBP25.91■■□□□ 1.74
TTC3-225ENST00000540756 TBC1D13Q9NVG8 400 aa25.91■■□□□ 1.74
TTC3-225ENST00000540756 HESX1Q9UBX0 185 aa25.91■■□□□ 1.74
TTC3-225ENST00000540756 ATP11BQ9Y2G3 1177 aa25.91■■□□□ 1.74
TTC3-225ENST00000540756 TTC3P53804 2025 aa25.91■■□□□ 1.74
TTC3-225ENST00000540756 PGRMC1O00264 195 aaKnown RBP25.9■■□□□ 1.74
TTC3-225ENST00000540756 KRT3P12035 628 aa25.9■■□□□ 1.74
TTC3-225ENST00000540756 PTPN1P18031 435 aaKnown RBP25.9■■□□□ 1.74
TTC3-225ENST00000540756 CTNNA2P26232 953 aa25.9■■□□□ 1.74
TTC3-225ENST00000540756 HDAC7Q8WUI4 952 aa25.9■■□□□ 1.74
TTC3-225ENST00000540756 SEPT8Q92599 483 aa25.9■■□□□ 1.74
TTC3-225ENST00000540756 CRTAC1Q9NQ79 661 aa25.9■■□□□ 1.74
TTC3-225ENST00000540756 DNAJB4Q9UDY4 337 aa25.9■■□□□ 1.74
TTC3-225ENST00000540756 SIGLEC16A6NMB1 481 aa25.9■■□□□ 1.74
TTC3-225ENST00000540756 ITIH3Q06033 890 aa25.9■■□□□ 1.74
TTC3-225ENST00000540756 FAM183BPQ6ZVS7 135 aa25.9■■□□□ 1.74
TTC3-225ENST00000540756 PAQR9Q6ZVX9 377 aa25.9■■□□□ 1.74
TTC3-225ENST00000540756 FUKQ8N0W3 1084 aa25.9■■□□□ 1.74
TTC3-225ENST00000540756 ANKRD52Q8NB46 1076 aa25.9■■□□□ 1.74
TTC3-225ENST00000540756 ARMC5Q96C12 935 aa25.9■■□□□ 1.74
TTC3-225ENST00000540756 MCRS1Q96EZ8 462 aa25.9■■□□□ 1.74
TTC3-225ENST00000540756 DDX27Q96GQ7 796 aaKnown RBP25.9■■□□□ 1.74
TTC3-225ENST00000540756 TNIP3Q96KP6 325 aa25.9■■□□□ 1.74
TTC3-225ENST00000540756 LRRC1Q9BTT6 524 aa25.9■■□□□ 1.74
TTC3-225ENST00000540756 B3GNT5Q9BYG0 378 aa25.9■■□□□ 1.74
TTC3-225ENST00000540756 TMEM161AQ9NX61 479 aa25.9■■□□□ 1.74
TTC3-225ENST00000540756 HCSTQ9UBK5 93 aa25.9■■□□□ 1.74
TTC3-225ENST00000540756 TMEM59LQ9UK28 342 aa25.9■■□□□ 1.74
TTC3-225ENST00000540756 TSC2P49815 1807 aa25.9■■□□□ 1.74
TTC3-225ENST00000540756 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.89■■□□□ 1.74
TTC3-225ENST00000540756 CCDC66A2RUB6 948 aa25.89■■□□□ 1.74
TTC3-225ENST00000540756 SLC1A1P43005 524 aa25.89■■□□□ 1.74
TTC3-225ENST00000540756 ZNF268Q14587 947 aaPredicted RBP25.89■■□□□ 1.74
TTC3-225ENST00000540756 MDH1BQ5I0G3 518 aa25.89■■□□□ 1.74
TTC3-225ENST00000540756 MMGT1Q8N4V1 131 aa25.89■■□□□ 1.74
TTC3-225ENST00000540756 RTP3Q9BQQ7 232 aa25.89■■□□□ 1.74
TTC3-225ENST00000540756 PLEKHA4Q9H4M7 779 aa25.89■■□□□ 1.74
TTC3-225ENST00000540756 IP6K2Q9UHH9 426 aa25.89■■□□□ 1.74
TTC3-225ENST00000540756 GJA8P48165 433 aa25.88■■□□□ 1.73
TTC3-225ENST00000540756 DSC1Q08554 894 aa25.88■■□□□ 1.73
TTC3-225ENST00000540756 TAF5Q15542 800 aa25.88■■□□□ 1.73
TTC3-225ENST00000540756 SCUBE3Q8IX30 993 aa25.88■■□□□ 1.73
TTC3-225ENST00000540756 PAWRQ96IZ0 340 aaKnown RBP25.88■■□□□ 1.73
TTC3-225ENST00000540756 MYBPHLA2RUH7 354 aa25.88■■□□□ 1.73
TTC3-225ENST00000540756 GRAP2O75791 330 aa25.88■■□□□ 1.73
TTC3-225ENST00000540756 ZMYND10O75800 440 aa25.88■■□□□ 1.73
TTC3-225ENST00000540756 BEST1O76090 585 aa25.88■■□□□ 1.73
TTC3-225ENST00000540756 SSR1P43307 286 aaKnown RBP25.88■■□□□ 1.73
TTC3-225ENST00000540756 RABGGTBP53611 331 aa25.88■■□□□ 1.73
TTC3-225ENST00000540756 GSCP56915 257 aaPredicted RBP25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 157.1 ms