RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 TPM4P67936 248 aa17.82■□□□□ 0.44
UBC-208ENST00000540700 CETN1Q12798 172 aa17.82■□□□□ 0.44
UBC-208ENST00000540700 CTXN3Q4LDR2 81 aa17.82■□□□□ 0.44
UBC-208ENST00000540700 ATAT1Q5SQI0 421 aa17.82■□□□□ 0.44
UBC-208ENST00000540700 CWF19L1Q69YN2 538 aaKnown RBP17.82■□□□□ 0.44
UBC-208ENST00000540700 ZNF280DQ6N043 979 aa17.82■□□□□ 0.44
UBC-208ENST00000540700 ANKS3Q6ZW76 656 aa17.82■□□□□ 0.44
UBC-208ENST00000540700 PPM1KQ8N3J5 372 aa17.82■□□□□ 0.44
UBC-208ENST00000540700 XPO4Q9C0E2 1151 aaKnown RBP17.82■□□□□ 0.44
UBC-208ENST00000540700 TMLHEQ9NVH6 421 aa17.82■□□□□ 0.44
UBC-208ENST00000540700 FNIP2Q9P278 1114 aa17.82■□□□□ 0.44
UBC-208ENST00000540700 APEX2Q9UBZ4 518 aa17.82■□□□□ 0.44
UBC-208ENST00000540700 DSEQ9UL01 958 aa17.82■□□□□ 0.44
UBC-208ENST00000540700 FHOD1Q9Y613 1164 aa17.82■□□□□ 0.44
UBC-208ENST00000540700 PDGFRBP09619 1106 aa17.81■□□□□ 0.44
UBC-208ENST00000540700 EPCAMP16422 314 aa17.81■□□□□ 0.44
UBC-208ENST00000540700 UBASH3AP57075 661 aa17.81■□□□□ 0.44
UBC-208ENST00000540700 PSMC1P62191 440 aaKnown RBP17.81■□□□□ 0.44
UBC-208ENST00000540700 INCA1Q0VD86 236 aa17.81■□□□□ 0.44
UBC-208ENST00000540700 KLHDC7AQ5VTJ3 777 aa17.81■□□□□ 0.44
UBC-208ENST00000540700 IQCEQ6IPM2 695 aa17.81■□□□□ 0.44
UBC-208ENST00000540700 SLC8B1Q6J4K2 584 aa17.81■□□□□ 0.44
UBC-208ENST00000540700 TMEM86AQ8N2M4 240 aa17.81■□□□□ 0.44
UBC-208ENST00000540700 PLCD3Q8N3E9 789 aa17.81■□□□□ 0.44
UBC-208ENST00000540700 CCDC150Q8NCX0 1101 aa17.81■□□□□ 0.44
UBC-208ENST00000540700 FEZF2Q8TBJ5 459 aa17.81■□□□□ 0.44
UBC-208ENST00000540700 NAA15Q9BXJ9 866 aaKnown RBP17.81■□□□□ 0.44
UBC-208ENST00000540700 GPR88Q9GZN0 384 aa17.81■□□□□ 0.44
UBC-208ENST00000540700 ELOVL4Q9GZR5 314 aa17.81■□□□□ 0.44
UBC-208ENST00000540700 ZCWPW1Q9H0M4 648 aa17.81■□□□□ 0.44
UBC-208ENST00000540700 CYP3A43Q9HB55 503 aa17.81■□□□□ 0.44
UBC-208ENST00000540700 UBE2TQ9NPD8 197 aaPredicted RBP17.81■□□□□ 0.44
UBC-208ENST00000540700 CRTAC1Q9NQ79 661 aa17.81■□□□□ 0.44
UBC-208ENST00000540700 CISHQ9NSE2 258 aa17.81■□□□□ 0.44
UBC-208ENST00000540700 FRYLO94915 3013 aa17.8■□□□□ 0.44
UBC-208ENST00000540700 EPG5Q9HCE0 2579 aa17.8■□□□□ 0.44
UBC-208ENST00000540700 WDR27A2RRH5 827 aa17.8■□□□□ 0.44
UBC-208ENST00000540700 MYBPHLA2RUH7 354 aa17.8■□□□□ 0.44
UBC-208ENST00000540700 RNF225M0QZC1 329 aaPredicted RBP17.8■□□□□ 0.44
UBC-208ENST00000540700 CILPO75339 1184 aa17.8■□□□□ 0.44
UBC-208ENST00000540700 CALCAP01258 141 aa17.8■□□□□ 0.44
UBC-208ENST00000540700 TPM2P07951 284 aa17.8■□□□□ 0.44
UBC-208ENST00000540700 PNMA6AP0CW24 399 aaPredicted RBP17.8■□□□□ 0.44
UBC-208ENST00000540700 OR1D2P34982 312 aa17.8■□□□□ 0.44
UBC-208ENST00000540700 GNL1P36915 607 aaPredicted RBP17.8■□□□□ 0.44
UBC-208ENST00000540700 NDST1P52848 882 aa17.8■□□□□ 0.44
UBC-208ENST00000540700 ROR1Q01973 937 aa17.8■□□□□ 0.44
UBC-208ENST00000540700 GCNT1Q02742 428 aa17.8■□□□□ 0.44
UBC-208ENST00000540700 ANGPT1Q15389 498 aa17.8■□□□□ 0.44
UBC-208ENST00000540700 FKBP15Q5T1M5 1219 aa17.8■□□□□ 0.44
UBC-208ENST00000540700 TMC5Q6UXY8 1006 aa17.8■□□□□ 0.44
UBC-208ENST00000540700 METTL23Q86XA0 190 aa17.8■□□□□ 0.44
UBC-208ENST00000540700 OR6B3Q8NGW1 331 aa17.8■□□□□ 0.44
UBC-208ENST00000540700 SPATA18Q8TC71 538 aa17.8■□□□□ 0.44
UBC-208ENST00000540700 FAXDC2Q96IV6 333 aa17.8■□□□□ 0.44
UBC-208ENST00000540700 CRISPLD1Q9H336 500 aa17.8■□□□□ 0.44
UBC-208ENST00000540700 PLCB1Q9NQ66 1216 aa17.8■□□□□ 0.44
UBC-208ENST00000540700 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.8■□□□□ 0.44
UBC-208ENST00000540700 FBXL21Q9UKT6 434 aa17.8■□□□□ 0.44
UBC-208ENST00000540700 H7C4K7 107 aa17.79■□□□□ 0.44
UBC-208ENST00000540700 FAM163BP0C2L3 166 aa17.79■□□□□ 0.44
UBC-208ENST00000540700 P4HA1P13674 534 aa17.79■□□□□ 0.44
UBC-208ENST00000540700 NPR3P17342 541 aa17.79■□□□□ 0.44
UBC-208ENST00000540700 AOC1P19801 751 aa17.79■□□□□ 0.44
UBC-208ENST00000540700 LHX1P48742 406 aa17.79■□□□□ 0.44
UBC-208ENST00000540700 CLCN4P51793 760 aa17.79■□□□□ 0.44
UBC-208ENST00000540700 ARPP19P56211 112 aa17.79■□□□□ 0.44
UBC-208ENST00000540700 RAB33AQ14088 237 aa17.79■□□□□ 0.44
UBC-208ENST00000540700 BMS1Q14692 1282 aaKnown RBP17.79■□□□□ 0.44
UBC-208ENST00000540700 INTS6LQ5JSJ4 861 aaKnown RBP17.79■□□□□ 0.44
UBC-208ENST00000540700 LILRA6Q6PI73 481 aa17.79■□□□□ 0.44
UBC-208ENST00000540700 RNF19BQ6ZMZ0 732 aa17.79■□□□□ 0.44
UBC-208ENST00000540700 PALB2Q86YC2 1186 aa17.79■□□□□ 0.44
UBC-208ENST00000540700 CCDC105Q8IYK2 499 aa17.79■□□□□ 0.44
UBC-208ENST00000540700 SLC22A17Q8WUG5 538 aa17.79■□□□□ 0.44
UBC-208ENST00000540700 SYT15Q9BQS2 421 aa17.79■□□□□ 0.44
UBC-208ENST00000540700 ACBD6Q9BR61 282 aa17.79■□□□□ 0.44
UBC-208ENST00000540700 ANP32EQ9BTT0 268 aa17.79■□□□□ 0.44
UBC-208ENST00000540700 FAM207AQ9NSI2 230 aaPredicted RBP17.79■□□□□ 0.44
UBC-208ENST00000540700 DZANK1Q9NVP4 752 aa17.79■□□□□ 0.44
UBC-208ENST00000540700 DNAJC12Q9UKB3 198 aa17.79■□□□□ 0.44
UBC-208ENST00000540700 ARHGEF37A1IGU5 675 aa17.78■□□□□ 0.44
UBC-208ENST00000540700 OR6C75A6NL08 312 aa17.78■□□□□ 0.44
UBC-208ENST00000540700 SPDYE4A6NLX3 237 aa17.78■□□□□ 0.44
UBC-208ENST00000540700 A8MXQ7 604 aa17.78■□□□□ 0.44
UBC-208ENST00000540700 TGM5O43548 720 aa17.78■□□□□ 0.44
UBC-208ENST00000540700 UCHL3P15374 230 aa17.78■□□□□ 0.44
UBC-208ENST00000540700 ZNF132P52740 706 aa17.78■□□□□ 0.44
UBC-208ENST00000540700 RAD23BP54727 409 aa17.78■□□□□ 0.44
UBC-208ENST00000540700 ARHGAP44Q17R89 818 aa17.78■□□□□ 0.44
UBC-208ENST00000540700 FILIP1LQ4L180 1135 aa17.78■□□□□ 0.44
UBC-208ENST00000540700 ZNF394Q53GI3 561 aa17.78■□□□□ 0.44
UBC-208ENST00000540700 FAM171BQ6P995 826 aa17.78■□□□□ 0.44
UBC-208ENST00000540700 PDXDC1Q6P996 788 aa17.78■□□□□ 0.44
UBC-208ENST00000540700 SARM1Q6SZW1 724 aa17.78■□□□□ 0.44
UBC-208ENST00000540700 SIX5Q8N196 739 aa17.78■□□□□ 0.44
UBC-208ENST00000540700 DTWD2Q8NBA8 298 aa17.78■□□□□ 0.44
UBC-208ENST00000540700 SLC4A11Q8NBS3 891 aa17.78■□□□□ 0.44
UBC-208ENST00000540700 PGLYRP2Q96PD5 576 aa17.78■□□□□ 0.44
UBC-208ENST00000540700 EMILIN2Q9BXX0 1053 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms