RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 LILRA6Q6PI73 481 aa11.3□□□□□ -0.6
ATL3-204ENST00000540699 GJD3Q8N144 294 aa11.3□□□□□ -0.6
ATL3-204ENST00000540699 TMEM86AQ8N2M4 240 aa11.3□□□□□ -0.6
ATL3-204ENST00000540699 VN1R2Q8NFZ6 395 aa11.3□□□□□ -0.6
ATL3-204ENST00000540699 SHC3Q92529 594 aa11.3□□□□□ -0.6
ATL3-204ENST00000540699 TATDN2Q93075 761 aa11.3□□□□□ -0.6
ATL3-204ENST00000540699 FAXDC2Q96IV6 333 aa11.3□□□□□ -0.6
ATL3-204ENST00000540699 FAM81BQ96LP2 452 aa11.3□□□□□ -0.6
ATL3-204ENST00000540699 RTP3Q9BQQ7 232 aa11.3□□□□□ -0.6
ATL3-204ENST00000540699 SYT11Q9BT88 431 aa11.3□□□□□ -0.6
ATL3-204ENST00000540699 PI4K2AQ9BTU6 479 aa11.3□□□□□ -0.6
ATL3-204ENST00000540699 UBE2TQ9NPD8 197 aaPredicted RBP11.3□□□□□ -0.6
ATL3-204ENST00000540699 TRMT1Q9NXH9 659 aaKnown RBP11.3□□□□□ -0.6
ATL3-204ENST00000540699 NENFQ9UMX5 172 aa11.3□□□□□ -0.6
ATL3-204ENST00000540699 L1RE1Q9UN81 338 aa11.3□□□□□ -0.6
ATL3-204ENST00000540699 R3HCC1Q9Y3T6 440 aaKnown RBP11.3□□□□□ -0.6
ATL3-204ENST00000540699 PIEZO1Q92508 2521 aa11.3□□□□□ -0.6
ATL3-204ENST00000540699 A0A0U1RQJ8 604 aa11.29□□□□□ -0.6
ATL3-204ENST00000540699 OR6C75A6NL08 312 aa11.29□□□□□ -0.6
ATL3-204ENST00000540699 GABRDO14764 452 aa11.29□□□□□ -0.6
ATL3-204ENST00000540699 LINC01565O15544 149 aa11.29□□□□□ -0.6
ATL3-204ENST00000540699 ADAM12O43184 909 aa11.29□□□□□ -0.6
ATL3-204ENST00000540699 TACC1O75410 805 aa11.29□□□□□ -0.6
ATL3-204ENST00000540699 RPL17P18621 184 aaKnown RBP11.29□□□□□ -0.6
ATL3-204ENST00000540699 ANXA13P27216 316 aa11.29□□□□□ -0.6
ATL3-204ENST00000540699 KIF11P52732 1056 aa11.29□□□□□ -0.6
ATL3-204ENST00000540699 KLHL30Q0D2K2 578 aa11.29□□□□□ -0.6
ATL3-204ENST00000540699 ARHGAP44Q17R89 818 aa11.29□□□□□ -0.6
ATL3-204ENST00000540699 SOWAHAQ2M3V2 549 aa11.29□□□□□ -0.6
ATL3-204ENST00000540699 SGSM1Q2NKQ1 1148 aa11.29□□□□□ -0.6
ATL3-204ENST00000540699 WSCD1Q658N2 575 aa11.29□□□□□ -0.6
ATL3-204ENST00000540699 SMYD5Q6GMV2 418 aa11.29□□□□□ -0.6
ATL3-204ENST00000540699 OVOS1Q6IE37 1185 aa11.29□□□□□ -0.6
ATL3-204ENST00000540699 ZNF280DQ6N043 979 aa11.29□□□□□ -0.6
ATL3-204ENST00000540699 ZNF662Q6ZS27 426 aa11.29□□□□□ -0.6
ATL3-204ENST00000540699 EP400NLQ6ZTU2 488 aa11.29□□□□□ -0.6
ATL3-204ENST00000540699 ENOSF1Q7L5Y1 443 aa11.29□□□□□ -0.6
ATL3-204ENST00000540699 ZNF571Q7Z3V5 609 aaPredicted RBP11.29□□□□□ -0.6
ATL3-204ENST00000540699 RBM23Q86U06 439 aaKnown RBP11.29□□□□□ -0.6
ATL3-204ENST00000540699 GPIHBP1Q8IV16 184 aa11.29□□□□□ -0.6
ATL3-204ENST00000540699 FMNL3Q8IVF7 1028 aa11.29□□□□□ -0.6
ATL3-204ENST00000540699 PDCL2Q8N4E4 241 aa11.29□□□□□ -0.6
ATL3-204ENST00000540699 HDAC7Q8WUI4 952 aa11.29□□□□□ -0.6
ATL3-204ENST00000540699 KBTBD7Q8WVZ9 684 aa11.29□□□□□ -0.6
ATL3-204ENST00000540699 ATRIPQ8WXE1 791 aa11.29□□□□□ -0.6
ATL3-204ENST00000540699 ELMO3Q96BJ8 720 aa11.29□□□□□ -0.6
ATL3-204ENST00000540699 CCDC42Q96M95 316 aa11.29□□□□□ -0.6
ATL3-204ENST00000540699 HAUS4Q9H6D7 363 aa11.29□□□□□ -0.6
ATL3-204ENST00000540699 TIMM13Q9Y5L4 95 aaPredicted RBP11.29□□□□□ -0.6
ATL3-204ENST00000540699 SNX9Q9Y5X1 595 aa11.29□□□□□ -0.6
ATL3-204ENST00000540699 HCFC2Q9Y5Z7 792 aa11.29□□□□□ -0.6
ATL3-204ENST00000540699 BZW2Q9Y6E2 419 aaKnown RBP11.29□□□□□ -0.6
ATL3-204ENST00000540699 DOCK6Q96HP0 2047 aa11.29□□□□□ -0.6
ATL3-204ENST00000540699 DENND4AQ7Z401 1863 aa11.29□□□□□ -0.6
ATL3-204ENST00000540699 GOLGA6L9A6NEM1 432 aa11.28□□□□□ -0.6
ATL3-204ENST00000540699 TULP1O00294 542 aaPredicted RBP11.28□□□□□ -0.6
ATL3-204ENST00000540699 FOXN3O00409 490 aaPredicted RBP11.28□□□□□ -0.6
ATL3-204ENST00000540699 HUS1O60921 280 aa11.28□□□□□ -0.6
ATL3-204ENST00000540699 TBX10O75333 385 aa11.28□□□□□ -0.6
ATL3-204ENST00000540699 GFPT2O94808 682 aa11.28□□□□□ -0.6
ATL3-204ENST00000540699 ABLIM3O94929 683 aa11.28□□□□□ -0.6
ATL3-204ENST00000540699 GLUD1P00367 558 aa11.28□□□□□ -0.6
ATL3-204ENST00000540699 ALADP13716 330 aa11.28□□□□□ -0.6
ATL3-204ENST00000540699 ACO1P21399 889 aaKnown RBP11.28□□□□□ -0.6
ATL3-204ENST00000540699 WARSP23381 471 aaKnown RBP11.28□□□□□ -0.6
ATL3-204ENST00000540699 KLRC2P26717 231 aa11.28□□□□□ -0.6
ATL3-204ENST00000540699 SSTR3P32745 418 aaPredicted RBP11.28□□□□□ -0.6
ATL3-204ENST00000540699 OR1D2P34982 312 aa11.28□□□□□ -0.6
ATL3-204ENST00000540699 ARHGAP25P42331 645 aa11.28□□□□□ -0.6
ATL3-204ENST00000540699 MFAP3P55082 362 aa11.28□□□□□ -0.6
ATL3-204ENST00000540699 NOP14P78316 857 aaKnown RBP11.28□□□□□ -0.6
ATL3-204ENST00000540699 ROR1Q01973 937 aa11.28□□□□□ -0.6
ATL3-204ENST00000540699 ARID5AQ03989 594 aa11.28□□□□□ -0.6
ATL3-204ENST00000540699 PTK2Q05397 1052 aa11.28□□□□□ -0.6
ATL3-204ENST00000540699 ZNF699Q32M78 642 aa11.28□□□□□ -0.6
ATL3-204ENST00000540699 WDR72Q3MJ13 1102 aa11.28□□□□□ -0.6
ATL3-204ENST00000540699 CTXN3Q4LDR2 81 aa11.28□□□□□ -0.6
ATL3-204ENST00000540699 TDRD12Q587J7 1177 aaKnown RBP11.28□□□□□ -0.6
ATL3-204ENST00000540699 ZNF667Q5HYK9 610 aa11.28□□□□□ -0.6
ATL3-204ENST00000540699 SPOPLQ6IQ16 392 aa11.28□□□□□ -0.6
ATL3-204ENST00000540699 RTL10Q7L3V2 364 aa11.28□□□□□ -0.6
ATL3-204ENST00000540699 METTL23Q86XA0 190 aa11.28□□□□□ -0.6
ATL3-204ENST00000540699 FAM71AQ8IYT1 594 aa11.28□□□□□ -0.6
ATL3-204ENST00000540699 PPM1KQ8N3J5 372 aa11.28□□□□□ -0.6
ATL3-204ENST00000540699 UBR7Q8N806 425 aa11.28□□□□□ -0.6
ATL3-204ENST00000540699 OR10T2Q8NGX3 314 aa11.28□□□□□ -0.6
ATL3-204ENST00000540699 CASP10Q92851 521 aa11.28□□□□□ -0.6
ATL3-204ENST00000540699 MSLNLQ96KJ4 702 aa11.28□□□□□ -0.6
ATL3-204ENST00000540699 CLDND1Q9NY35 253 aa11.28□□□□□ -0.6
ATL3-204ENST00000540699 CLEC1BQ9P126 229 aa11.28□□□□□ -0.6
ATL3-204ENST00000540699 FBXW11Q9UKB1 542 aa11.28□□□□□ -0.6
ATL3-204ENST00000540699 MAFFQ9ULX9 164 aa11.28□□□□□ -0.6
ATL3-204ENST00000540699 CDY1Q9Y6F8 540 aa11.28□□□□□ -0.6
ATL3-204ENST00000540699 NOTCH4Q99466 2003 aa11.28□□□□□ -0.6
ATL3-204ENST00000540699 GREB1Q4ZG55 1949 aa11.27□□□□□ -0.6
ATL3-204ENST00000540699 ZNF318Q5VUA4 2279 aa11.27□□□□□ -0.61
ATL3-204ENST00000540699 WDR27A2RRH5 827 aa11.27□□□□□ -0.61
ATL3-204ENST00000540699 TGM5O43548 720 aa11.27□□□□□ -0.61
ATL3-204ENST00000540699 P4HA1P13674 534 aa11.27□□□□□ -0.61
ATL3-204ENST00000540699 EPCAMP16422 314 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms