RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 ZC3H14Q6PJT7 736 aaKnown RBP22.45■■□□□ 1.18
CHFR-217ENST00000540537 C4orf50Q6ZRC1 276 aa22.45■■□□□ 1.18
CHFR-217ENST00000540537 GPIHBP1Q8IV16 184 aa22.45■■□□□ 1.18
CHFR-217ENST00000540537 CSGALNACT1Q8TDX6 532 aa22.45■■□□□ 1.18
CHFR-217ENST00000540537 TMEM174Q8WUU8 243 aa22.45■■□□□ 1.18
CHFR-217ENST00000540537 FAM3CQ92520 227 aa22.45■■□□□ 1.18
CHFR-217ENST00000540537 LRRC3BQ96PB8 259 aa22.45■■□□□ 1.18
CHFR-217ENST00000540537 MMS19Q96T76 1030 aa22.45■■□□□ 1.18
CHFR-217ENST00000540537 SLC46A2Q9BY10 475 aa22.45■■□□□ 1.18
CHFR-217ENST00000540537 SCAND2PQ9GZW5 306 aaPredicted RBP22.45■■□□□ 1.18
CHFR-217ENST00000540537 FBXO4Q9UKT5 387 aa22.45■■□□□ 1.18
CHFR-217ENST00000540537 ZNF638Q14966 1978 aaKnown RBP22.45■■□□□ 1.18
CHFR-217ENST00000540537 NOL4O94818 638 aa22.44■■□□□ 1.18
CHFR-217ENST00000540537 STAU1O95793 577 aaKnown RBP22.44■■□□□ 1.18
CHFR-217ENST00000540537 FAM163BP0C2L3 166 aa22.44■■□□□ 1.18
CHFR-217ENST00000540537 LMO2P25791 158 aa22.44■■□□□ 1.18
CHFR-217ENST00000540537 MAGEA11P43364 429 aa22.44■■□□□ 1.18
CHFR-217ENST00000540537 SYKP43405 635 aa22.44■■□□□ 1.18
CHFR-217ENST00000540537 MAPRE1Q15691 268 aaKnown RBP22.44■■□□□ 1.18
CHFR-217ENST00000540537 CCDC142Q17RM4 750 aa22.44■■□□□ 1.18
CHFR-217ENST00000540537 ZNF528Q3MIS6 628 aa22.44■■□□□ 1.18
CHFR-217ENST00000540537 SDHAF4Q5VUM1 108 aa22.44■■□□□ 1.18
CHFR-217ENST00000540537 SLC9A9Q8IVB4 645 aa22.44■■□□□ 1.18
CHFR-217ENST00000540537 CMTM8Q8IZV2 173 aa22.44■■□□□ 1.18
CHFR-217ENST00000540537 CELF5Q8N6W0 485 aaKnown RBP22.44■■□□□ 1.18
CHFR-217ENST00000540537 BPIFB1Q8TDL5 484 aa22.44■■□□□ 1.18
CHFR-217ENST00000540537 ZNF516Q92618 1163 aa22.44■■□□□ 1.18
CHFR-217ENST00000540537 TRMT2BQ96GJ1 504 aaKnown RBP22.44■■□□□ 1.18
CHFR-217ENST00000540537 CFAP54Q96N23 3096 aa22.44■■□□□ 1.18
CHFR-217ENST00000540537 C8orf33Q9H7E9 229 aaPredicted RBP22.44■■□□□ 1.18
CHFR-217ENST00000540537 UXTQ9UBK9 157 aaPredicted RBP22.44■■□□□ 1.18
CHFR-217ENST00000540537 NDRG2Q9UN36 371 aaKnown RBP22.44■■□□□ 1.18
CHFR-217ENST00000540537 PTPRDP23468 1912 aa22.43■■□□□ 1.18
CHFR-217ENST00000540537 KIF26AQ9ULI4 1882 aaPredicted RBP22.43■■□□□ 1.18
CHFR-217ENST00000540537 TACC1O75410 805 aa22.43■■□□□ 1.18
CHFR-217ENST00000540537 NDUFA8P51970 172 aa22.43■■□□□ 1.18
CHFR-217ENST00000540537 PSMC1P62191 440 aaKnown RBP22.43■■□□□ 1.18
CHFR-217ENST00000540537 PLCB2Q00722 1185 aa22.43■■□□□ 1.18
CHFR-217ENST00000540537 TRPC3Q13507 836 aa22.43■■□□□ 1.18
CHFR-217ENST00000540537 MRPS31Q92665 395 aaKnown RBP22.43■■□□□ 1.18
CHFR-217ENST00000540537 MYRFLQ96LU7 910 aa22.43■■□□□ 1.18
CHFR-217ENST00000540537 IER2Q9BTL4 223 aa22.43■■□□□ 1.18
CHFR-217ENST00000540537 KCTD10Q9H3F6 313 aa22.43■■□□□ 1.18
CHFR-217ENST00000540537 CRTAC1Q9NQ79 661 aa22.43■■□□□ 1.18
CHFR-217ENST00000540537 DMAC2Q9NW81 257 aa22.43■■□□□ 1.18
CHFR-217ENST00000540537 MAGEC2Q9UBF1 373 aaPredicted RBP22.43■■□□□ 1.18
CHFR-217ENST00000540537 MAGED2Q9UNF1 606 aaPredicted RBP22.43■■□□□ 1.18
CHFR-217ENST00000540537 R4GN57 208 aa22.43■■□□□ 1.18
CHFR-217ENST00000540537 A0A1W2PQ27 194 aa22.42■■□□□ 1.18
CHFR-217ENST00000540537 A0A1W2PQ64 194 aa22.42■■□□□ 1.18
CHFR-217ENST00000540537 A0A1W2PQD8 194 aa22.42■■□□□ 1.18
CHFR-217ENST00000540537 SLC38A8A6NNN8 435 aa22.42■■□□□ 1.18
CHFR-217ENST00000540537 PDXKO00764 312 aa22.42■■□□□ 1.18
CHFR-217ENST00000540537 ATP2C2O75185 946 aa22.42■■□□□ 1.18
CHFR-217ENST00000540537 RPN1P04843 607 aaKnown RBP22.42■■□□□ 1.18
CHFR-217ENST00000540537 ATICP31939 592 aa22.42■■□□□ 1.18
CHFR-217ENST00000540537 AVPR1AP37288 418 aa22.42■■□□□ 1.18
CHFR-217ENST00000540537 AP3M2P53677 418 aa22.42■■□□□ 1.18
CHFR-217ENST00000540537 TNNC1P63316 161 aa22.42■■□□□ 1.18
CHFR-217ENST00000540537 VSTM1Q6UX27 236 aa22.42■■□□□ 1.18
CHFR-217ENST00000540537 SCN4BQ8IWT1 228 aa22.42■■□□□ 1.18
CHFR-217ENST00000540537 STKLD1Q8NE28 680 aa22.42■■□□□ 1.18
CHFR-217ENST00000540537 PLEKHO2Q8TD55 490 aa22.42■■□□□ 1.18
CHFR-217ENST00000540537 MYLPFQ96A32 169 aa22.42■■□□□ 1.18
CHFR-217ENST00000540537 CEP295NLQ96MC4 621 aa22.42■■□□□ 1.18
CHFR-217ENST00000540537 CHRDQ9H2X0 955 aa22.42■■□□□ 1.18
CHFR-217ENST00000540537 SNX25Q9H3E2 840 aa22.42■■□□□ 1.18
CHFR-217ENST00000540537 KIF9Q9HAQ2 790 aa22.42■■□□□ 1.18
CHFR-217ENST00000540537 THG1LQ9NWX6 298 aaKnown RBP22.42■■□□□ 1.18
CHFR-217ENST00000540537 GREB1Q4ZG55 1949 aa22.41■■□□□ 1.18
CHFR-217ENST00000540537 TADA3O75528 432 aa22.41■■□□□ 1.18
CHFR-217ENST00000540537 PDGFRBP09619 1106 aa22.41■■□□□ 1.18
CHFR-217ENST00000540537 CCNE1P24864 410 aa22.41■■□□□ 1.18
CHFR-217ENST00000540537 GNL1P36915 607 aaPredicted RBP22.41■■□□□ 1.18
CHFR-217ENST00000540537 KPNA1P52294 538 aaPredicted RBP22.41■■□□□ 1.18
CHFR-217ENST00000540537 MYL6P60660 151 aa22.41■■□□□ 1.18
CHFR-217ENST00000540537 CLDN10P78369 228 aa22.41■■□□□ 1.18
CHFR-217ENST00000540537 WDR72Q3MJ13 1102 aa22.41■■□□□ 1.18
CHFR-217ENST00000540537 MON1AQ86VX9 555 aa22.41■■□□□ 1.18
CHFR-217ENST00000540537 MAB21L3Q8N8X9 362 aa22.41■■□□□ 1.18
CHFR-217ENST00000540537 PARD3BQ8TEW8 1205 aa22.41■■□□□ 1.18
CHFR-217ENST00000540537 CCDC47Q96A33 483 aaKnown RBP22.41■■□□□ 1.18
CHFR-217ENST00000540537 SYAP1Q96A49 352 aaPredicted RBP22.41■■□□□ 1.18
CHFR-217ENST00000540537 MRPL45Q9BRJ2 306 aaKnown RBP22.41■■□□□ 1.18
CHFR-217ENST00000540537 SMG9Q9H0W8 520 aaKnown RBP22.41■■□□□ 1.18
CHFR-217ENST00000540537 VRTNQ9H8Y1 702 aa22.41■■□□□ 1.18
CHFR-217ENST00000540537 GVINP1Q7Z2Y8 2422 aa22.41■■□□□ 1.18
CHFR-217ENST00000540537 LRRIQ3A6PVS8 624 aaPredicted RBP22.4■■□□□ 1.18
CHFR-217ENST00000540537 PHACTR2O75167 634 aa22.4■■□□□ 1.18
CHFR-217ENST00000540537 KIF20AO95235 890 aa22.4■■□□□ 1.18
CHFR-217ENST00000540537 NR3C1P04150 777 aa22.4■■□□□ 1.18
CHFR-217ENST00000540537 CASP4P49662 377 aa22.4■■□□□ 1.18
CHFR-217ENST00000540537 CSTF1Q05048 431 aaKnown RBP22.4■■□□□ 1.18
CHFR-217ENST00000540537 TDRD10Q5VZ19 366 aaKnown RBP22.4■■□□□ 1.18
CHFR-217ENST00000540537 TXNDC8Q6A555 127 aa22.4■■□□□ 1.18
CHFR-217ENST00000540537 RALGPS2Q86X27 583 aaPredicted RBP22.4■■□□□ 1.18
CHFR-217ENST00000540537 FSIP1Q8NA03 581 aa22.4■■□□□ 1.18
CHFR-217ENST00000540537 MYCBPAPQ8TBZ2 947 aa22.4■■□□□ 1.18
CHFR-217ENST00000540537 USP13Q92995 863 aaPredicted RBP22.4■■□□□ 1.18
CHFR-217ENST00000540537 ZFYVE19Q96K21 471 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms