RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 ARID3BQ8IVW6 561 aaPredicted RBP9.62□□□□□ -0.87
TRAPPC1-202ENST00000540486 LARP4BQ92615 738 aaKnown RBP9.62□□□□□ -0.87
TRAPPC1-202ENST00000540486 KIFAP3Q92845 792 aa9.62□□□□□ -0.87
TRAPPC1-202ENST00000540486 EXOC4Q96A65 974 aa9.62□□□□□ -0.87
TRAPPC1-202ENST00000540486 KIFC3Q9BVG8 833 aa9.62□□□□□ -0.87
TRAPPC1-202ENST00000540486 CCDC113Q9H0I3 377 aa9.62□□□□□ -0.87
TRAPPC1-202ENST00000540486 KLK14Q9P0G3 267 aa9.62□□□□□ -0.87
TRAPPC1-202ENST00000540486 CACNG4Q9UBN1 327 aa9.62□□□□□ -0.87
TRAPPC1-202ENST00000540486 CCDC39Q9UFE4 941 aa9.62□□□□□ -0.87
TRAPPC1-202ENST00000540486 APOBEC2Q9Y235 224 aaKnown RBP9.62□□□□□ -0.87
TRAPPC1-202ENST00000540486 PCDHB9Q9Y5E1 797 aa9.62□□□□□ -0.87
TRAPPC1-202ENST00000540486 INSL5Q9Y5Q6 135 aa9.62□□□□□ -0.87
TRAPPC1-202ENST00000540486 ABCA7Q8IZY2 2146 aa9.62□□□□□ -0.87
TRAPPC1-202ENST00000540486 NUP205Q92621 2012 aa9.61□□□□□ -0.87
TRAPPC1-202ENST00000540486 SHROOM3Q8TF72 1996 aa9.61□□□□□ -0.87
TRAPPC1-202ENST00000540486 TDRD15B5MCY1 1934 aaKnown RBP9.61□□□□□ -0.87
TRAPPC1-202ENST00000540486 TCHHQ07283 1943 aa9.61□□□□□ -0.87
TRAPPC1-202ENST00000540486 A0A1B0GUA9 196 aa9.61□□□□□ -0.87
TRAPPC1-202ENST00000540486 MYMKA6NI61 221 aa9.61□□□□□ -0.87
TRAPPC1-202ENST00000540486 TMEM189-UBE2V1I3L0A0 370 aa9.61□□□□□ -0.87
TRAPPC1-202ENST00000540486 FTH1P19P0C7X4 201 aa9.61□□□□□ -0.87
TRAPPC1-202ENST00000540486 GJA1P17302 382 aa9.61□□□□□ -0.87
TRAPPC1-202ENST00000540486 ARF4P18085 180 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC1-202ENST00000540486 HOXD12P35452 270 aa9.61□□□□□ -0.87
TRAPPC1-202ENST00000540486 NUCB2P80303 420 aa9.61□□□□□ -0.87
TRAPPC1-202ENST00000540486 SRSF1Q07955 248 aaKnown RBP eCLIP9.61□□□□□ -0.87
TRAPPC1-202ENST00000540486 SLC14A1Q13336 389 aa9.61□□□□□ -0.87
TRAPPC1-202ENST00000540486 DMC1Q14565 340 aa9.61□□□□□ -0.87
TRAPPC1-202ENST00000540486 FAM187BQ17R55 369 aa9.61□□□□□ -0.87
TRAPPC1-202ENST00000540486 SPDYCQ5MJ68 293 aa9.61□□□□□ -0.87
TRAPPC1-202ENST00000540486 SLC27A1Q6PCB7 646 aa9.61□□□□□ -0.87
TRAPPC1-202ENST00000540486 TAS1R3Q7RTX0 852 aa9.61□□□□□ -0.87
TRAPPC1-202ENST00000540486 GPBP1Q86WP2 473 aa9.61□□□□□ -0.87
TRAPPC1-202ENST00000540486 CDR2LQ86X02 465 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC1-202ENST00000540486 PDILTQ8N807 584 aa9.61□□□□□ -0.87
TRAPPC1-202ENST00000540486 CEP76Q8TAP6 659 aa9.61□□□□□ -0.87
TRAPPC1-202ENST00000540486 SHKBP1Q8TBC3 707 aa9.61□□□□□ -0.87
TRAPPC1-202ENST00000540486 LEO1Q8WVC0 666 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC1-202ENST00000540486 ACDQ96AP0 544 aa9.61□□□□□ -0.87
TRAPPC1-202ENST00000540486 CRELD1Q96HD1 420 aa9.61□□□□□ -0.87
TRAPPC1-202ENST00000540486 CPB2Q96IY4 423 aa9.61□□□□□ -0.87
TRAPPC1-202ENST00000540486 ZFYVE19Q96K21 471 aa9.61□□□□□ -0.87
TRAPPC1-202ENST00000540486 LRRC3BQ96PB8 259 aa9.61□□□□□ -0.87
TRAPPC1-202ENST00000540486 REEP2Q9BRK0 252 aa9.61□□□□□ -0.87
TRAPPC1-202ENST00000540486 C17orf75Q9HAS0 396 aa9.61□□□□□ -0.87
TRAPPC1-202ENST00000540486 IL21Q9HBE4 155 aa9.61□□□□□ -0.87
TRAPPC1-202ENST00000540486 POLMQ9NP87 494 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC1-202ENST00000540486 THG1LQ9NWX6 298 aaKnown RBP9.61□□□□□ -0.87
TRAPPC1-202ENST00000540486 KCND2Q9NZV8 630 aa9.61□□□□□ -0.87
TRAPPC1-202ENST00000540486 KIAA1522Q9P206 1035 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC1-202ENST00000540486 CEP72Q9P209 647 aa9.61□□□□□ -0.87
TRAPPC1-202ENST00000540486 MBD1Q9UIS9 605 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC1-202ENST00000540486 SLC6A14Q9UN76 642 aa9.61□□□□□ -0.87
TRAPPC1-202ENST00000540486 CCDC169A6NNP5 214 aa9.6□□□□□ -0.87
TRAPPC1-202ENST00000540486 ACKR2O00590 384 aa9.6□□□□□ -0.87
TRAPPC1-202ENST00000540486 SEC24AO95486 1093 aa9.6□□□□□ -0.87
TRAPPC1-202ENST00000540486 PLS3P13797 630 aa9.6□□□□□ -0.87
TRAPPC1-202ENST00000540486 CD59P13987 128 aa9.6□□□□□ -0.87
TRAPPC1-202ENST00000540486 WEE1P30291 646 aa9.6□□□□□ -0.87
TRAPPC1-202ENST00000540486 ME1P48163 572 aa9.6□□□□□ -0.87
TRAPPC1-202ENST00000540486 KRT85P78386 507 aa9.6□□□□□ -0.87
TRAPPC1-202ENST00000540486 CFHR1Q03591 330 aa9.6□□□□□ -0.87
TRAPPC1-202ENST00000540486 GFPT1Q06210 699 aaPredicted RBP9.6□□□□□ -0.87
TRAPPC1-202ENST00000540486 TNK2Q07912 1038 aa9.6□□□□□ -0.87
TRAPPC1-202ENST00000540486 PPP2R5AQ15172 486 aa9.6□□□□□ -0.87
TRAPPC1-202ENST00000540486 NT5DC1Q5TFE4 455 aa9.6□□□□□ -0.87
TRAPPC1-202ENST00000540486 RESP18Q5W5W9 173 aa9.6□□□□□ -0.87
TRAPPC1-202ENST00000540486 ADALQ6DHV7 355 aa9.6□□□□□ -0.87
TRAPPC1-202ENST00000540486 CCDC73Q6ZRK6 1079 aa9.6□□□□□ -0.87
TRAPPC1-202ENST00000540486 TOGARAM2Q6ZUX3 1019 aa9.6□□□□□ -0.87
TRAPPC1-202ENST00000540486 LPCAT2Q7L5N7 544 aa9.6□□□□□ -0.87
TRAPPC1-202ENST00000540486 DYMQ7RTS9 669 aa9.6□□□□□ -0.87
TRAPPC1-202ENST00000540486 TSTD1Q8NFU3 115 aa9.6□□□□□ -0.87
TRAPPC1-202ENST00000540486 RASSF8Q8NHQ8 419 aa9.6□□□□□ -0.87
TRAPPC1-202ENST00000540486 CCDC26Q8TAB7 109 aa9.6□□□□□ -0.87
TRAPPC1-202ENST00000540486 DEPTORQ8TB45 409 aa9.6□□□□□ -0.87
TRAPPC1-202ENST00000540486 BPIFB1Q8TDL5 484 aa9.6□□□□□ -0.87
TRAPPC1-202ENST00000540486 SPIRE2Q8WWL2 714 aa9.6□□□□□ -0.87
TRAPPC1-202ENST00000540486 DNAJC19Q96DA6 116 aa9.6□□□□□ -0.87
TRAPPC1-202ENST00000540486 IFT74Q96LB3 600 aa9.6□□□□□ -0.87
TRAPPC1-202ENST00000540486 SPATA32Q96LK8 384 aa9.6□□□□□ -0.87
TRAPPC1-202ENST00000540486 FIZ1Q96SL8 496 aa9.6□□□□□ -0.87
TRAPPC1-202ENST00000540486 TIPINQ9BVW5 301 aa9.6□□□□□ -0.87
TRAPPC1-202ENST00000540486 PRORYQ9H606 182 aa9.6□□□□□ -0.87
TRAPPC1-202ENST00000540486 GDPD2Q9HCC8 539 aa9.6□□□□□ -0.87
TRAPPC1-202ENST00000540486 PRMT7Q9NVM4 692 aaPredicted RBP9.6□□□□□ -0.87
TRAPPC1-202ENST00000540486 POLR3BQ9NW08 1133 aaPredicted RBP9.6□□□□□ -0.87
TRAPPC1-202ENST00000540486 ARHGAP28Q9P2N2 729 aa9.6□□□□□ -0.87
TRAPPC1-202ENST00000540486 STK17AQ9UEE5 414 aa9.6□□□□□ -0.87
TRAPPC1-202ENST00000540486 INVSQ9Y283 1065 aa9.6□□□□□ -0.87
TRAPPC1-202ENST00000540486 EML5Q05BV3 1969 aa9.6□□□□□ -0.87
TRAPPC1-202ENST00000540486 PDCD11Q14690 1871 aaKnown RBP9.59□□□□□ -0.87
TRAPPC1-202ENST00000540486 H7C4K7 107 aa9.59□□□□□ -0.87
TRAPPC1-202ENST00000540486 K7ERI5 159 aa9.59□□□□□ -0.87
TRAPPC1-202ENST00000540486 PTGESO14684 152 aa9.59□□□□□ -0.87
TRAPPC1-202ENST00000540486 SLC16A4O15374 487 aa9.59□□□□□ -0.87
TRAPPC1-202ENST00000540486 B3GAT3O94766 335 aa9.59□□□□□ -0.87
TRAPPC1-202ENST00000540486 NPTXRO95502 500 aa9.59□□□□□ -0.87
TRAPPC1-202ENST00000540486 EGFP01133 1207 aa9.59□□□□□ -0.87
TRAPPC1-202ENST00000540486 CMA1P23946 247 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms