RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 ZNF806P0C7X5 589 aa12.89□□□□□ -0.35
CBX3P4-202ENST00000540428 ARSAP15289 507 aa12.89□□□□□ -0.35
CBX3P4-202ENST00000540428 TCF3P15923 654 aa12.89□□□□□ -0.35
CBX3P4-202ENST00000540428 CYP2F1P24903 491 aa12.89□□□□□ -0.35
CBX3P4-202ENST00000540428 PCSK1P29120 753 aa12.89□□□□□ -0.35
CBX3P4-202ENST00000540428 RAP1GAPP47736 663 aa12.89□□□□□ -0.35
CBX3P4-202ENST00000540428 RBP5P82980 135 aa12.89□□□□□ -0.35
CBX3P4-202ENST00000540428 CUL4AQ13619 759 aa12.89□□□□□ -0.35
CBX3P4-202ENST00000540428 MTF1Q14872 753 aa12.89□□□□□ -0.35
CBX3P4-202ENST00000540428 DDR2Q16832 855 aa12.89□□□□□ -0.35
CBX3P4-202ENST00000540428 DPH6Q7L8W6 267 aa12.89□□□□□ -0.35
CBX3P4-202ENST00000540428 SYCP3Q8IZU3 236 aa12.89□□□□□ -0.35
CBX3P4-202ENST00000540428 CPA6Q8N4T0 437 aa12.89□□□□□ -0.35
CBX3P4-202ENST00000540428 CSGALNACT2Q8N6G5 542 aa12.89□□□□□ -0.35
CBX3P4-202ENST00000540428 RIN3Q8TB24 985 aa12.89□□□□□ -0.35
CBX3P4-202ENST00000540428 OSCP1Q8WVF1 389 aa12.89□□□□□ -0.35
CBX3P4-202ENST00000540428 CEP295NLQ96MC4 621 aa12.89□□□□□ -0.35
CBX3P4-202ENST00000540428 P2RY13Q9BPV8 354 aa12.89□□□□□ -0.35
CBX3P4-202ENST00000540428 GTF3C4Q9UKN8 822 aa12.89□□□□□ -0.35
CBX3P4-202ENST00000540428 SNX9Q9Y5X1 595 aa12.89□□□□□ -0.35
CBX3P4-202ENST00000540428 ANK1P16157 1881 aa12.89□□□□□ -0.35
CBX3P4-202ENST00000540428 TRAV19A0A0A6YYK7 116 aa12.88□□□□□ -0.35
CBX3P4-202ENST00000540428 AXIN1O15169 862 aa12.88□□□□□ -0.35
CBX3P4-202ENST00000540428 GDF9O60383 454 aa12.88□□□□□ -0.35
CBX3P4-202ENST00000540428 RNF40O75150 1001 aa12.88□□□□□ -0.35
CBX3P4-202ENST00000540428 EGFP01133 1207 aa12.88□□□□□ -0.35
CBX3P4-202ENST00000540428 USP17L7P0C7H9 530 aa12.88□□□□□ -0.35
CBX3P4-202ENST00000540428 TMEM191BP0C7N4 346 aa12.88□□□□□ -0.35
CBX3P4-202ENST00000540428 CCDC192P0DO97 292 aa12.88□□□□□ -0.35
CBX3P4-202ENST00000540428 PFKLP17858 780 aa12.88□□□□□ -0.35
CBX3P4-202ENST00000540428 ACAT1P24752 427 aaKnown RBP12.88□□□□□ -0.35
CBX3P4-202ENST00000540428 HOXC13P31276 330 aa12.88□□□□□ -0.35
CBX3P4-202ENST00000540428 GJA4P35212 333 aa12.88□□□□□ -0.35
CBX3P4-202ENST00000540428 MAGEA11P43364 429 aa12.88□□□□□ -0.35
CBX3P4-202ENST00000540428 GALK1P51570 392 aa12.88□□□□□ -0.35
CBX3P4-202ENST00000540428 CASP5P51878 434 aa12.88□□□□□ -0.35
CBX3P4-202ENST00000540428 MYO1EQ12965 1108 aa12.88□□□□□ -0.35
CBX3P4-202ENST00000540428 USP4Q13107 963 aa12.88□□□□□ -0.35
CBX3P4-202ENST00000540428 SURF1Q15526 300 aa12.88□□□□□ -0.35
CBX3P4-202ENST00000540428 ZNF77Q15935 545 aa12.88□□□□□ -0.35
CBX3P4-202ENST00000540428 AASDHQ4L235 1098 aaPredicted RBP12.88□□□□□ -0.35
CBX3P4-202ENST00000540428 SDHAF4Q5VUM1 108 aa12.88□□□□□ -0.35
CBX3P4-202ENST00000540428 IL31Q6EBC2 164 aa12.88□□□□□ -0.35
CBX3P4-202ENST00000540428 FAM171BQ6P995 826 aa12.88□□□□□ -0.35
CBX3P4-202ENST00000540428 LIMS2Q7Z4I7 341 aa12.88□□□□□ -0.35
CBX3P4-202ENST00000540428 SPATA2LQ8IUW3 424 aaPredicted RBP12.88□□□□□ -0.35
CBX3P4-202ENST00000540428 ADGRF2Q8IZF7 708 aa12.88□□□□□ -0.35
CBX3P4-202ENST00000540428 FSIP1Q8NA03 581 aa12.88□□□□□ -0.35
CBX3P4-202ENST00000540428 C12orf50Q8NA57 414 aaPredicted RBP12.88□□□□□ -0.35
CBX3P4-202ENST00000540428 ZSWIM2Q8NEG5 633 aa12.88□□□□□ -0.35
CBX3P4-202ENST00000540428 CCDC26Q8TAB7 109 aa12.88□□□□□ -0.35
CBX3P4-202ENST00000540428 ATP2A3Q93084 1043 aa12.88□□□□□ -0.35
CBX3P4-202ENST00000540428 ZC3H10Q96K80 434 aaKnown RBP12.88□□□□□ -0.35
CBX3P4-202ENST00000540428 CBWD1Q9BRT8 395 aa12.88□□□□□ -0.35
CBX3P4-202ENST00000540428 ARRDC1-AS1Q9H2J1 176 aa12.88□□□□□ -0.35
CBX3P4-202ENST00000540428 ECT2Q9H8V3 914 aa12.88□□□□□ -0.35
CBX3P4-202ENST00000540428 TBC1D7Q9P0N9 293 aa12.88□□□□□ -0.35
CBX3P4-202ENST00000540428 SIX4Q9UIU6 781 aa12.88□□□□□ -0.35
CBX3P4-202ENST00000540428 SPTBN2O15020 2390 aa12.87□□□□□ -0.35
CBX3P4-202ENST00000540428 CKMP06732 381 aa12.87□□□□□ -0.35
CBX3P4-202ENST00000540428 KRT19P08727 400 aa12.87□□□□□ -0.35
CBX3P4-202ENST00000540428 IDEP14735 1019 aa12.87□□□□□ -0.35
CBX3P4-202ENST00000540428 IFNAR2P48551 515 aa12.87□□□□□ -0.35
CBX3P4-202ENST00000540428 PXNP49023 591 aaPredicted RBP12.87□□□□□ -0.35
CBX3P4-202ENST00000540428 PDE6CP51160 858 aa12.87□□□□□ -0.35
CBX3P4-202ENST00000540428 RESTQ13127 1097 aa12.87□□□□□ -0.35
CBX3P4-202ENST00000540428 MAPRE1Q15691 268 aaKnown RBP12.87□□□□□ -0.35
CBX3P4-202ENST00000540428 SOWAHAQ2M3V2 549 aa12.87□□□□□ -0.35
CBX3P4-202ENST00000540428 PLA2G2CQ5R387 149 aa12.87□□□□□ -0.35
CBX3P4-202ENST00000540428 VSTM1Q6UX27 236 aa12.87□□□□□ -0.35
CBX3P4-202ENST00000540428 C4orf50Q6ZRC1 276 aa12.87□□□□□ -0.35
CBX3P4-202ENST00000540428 STXBP4Q6ZWJ1 553 aa12.87□□□□□ -0.35
CBX3P4-202ENST00000540428 SYT13Q7L8C5 426 aa12.87□□□□□ -0.35
CBX3P4-202ENST00000540428 KBTBD6Q86V97 674 aa12.87□□□□□ -0.35
CBX3P4-202ENST00000540428 OSTM1Q86WC4 334 aa12.87□□□□□ -0.35
CBX3P4-202ENST00000540428 GPD1LQ8N335 351 aa12.87□□□□□ -0.35
CBX3P4-202ENST00000540428 KIAA1958Q8N8K9 716 aa12.87□□□□□ -0.35
CBX3P4-202ENST00000540428 STKLD1Q8NE28 680 aa12.87□□□□□ -0.35
CBX3P4-202ENST00000540428 CD101Q93033 1021 aa12.87□□□□□ -0.35
CBX3P4-202ENST00000540428 ACDQ96AP0 544 aa12.87□□□□□ -0.35
CBX3P4-202ENST00000540428 ANKRD36BP1Q96IX9 119 aa12.87□□□□□ -0.35
CBX3P4-202ENST00000540428 CLIC6Q96NY7 704 aa12.87□□□□□ -0.35
CBX3P4-202ENST00000540428 MTMR12Q9C0I1 747 aa12.87□□□□□ -0.35
CBX3P4-202ENST00000540428 FBRSL1Q9HCM7 1045 aaKnown RBP12.87□□□□□ -0.35
CBX3P4-202ENST00000540428 PDE11AQ9HCR9 933 aa12.87□□□□□ -0.35
CBX3P4-202ENST00000540428 TRPC7Q9HCX4 862 aa12.87□□□□□ -0.35
CBX3P4-202ENST00000540428 PANK4Q9NVE7 773 aa12.87□□□□□ -0.35
CBX3P4-202ENST00000540428 INTS13Q9NVM9 706 aa12.87□□□□□ -0.35
CBX3P4-202ENST00000540428 DUS2Q9NX74 493 aaKnown RBP12.87□□□□□ -0.35
CBX3P4-202ENST00000540428 GCNT4Q9P109 453 aa12.87□□□□□ -0.35
CBX3P4-202ENST00000540428 EBF1Q9UH73 591 aa12.87□□□□□ -0.35
CBX3P4-202ENST00000540428 CDH9Q9ULB4 789 aa12.87□□□□□ -0.35
CBX3P4-202ENST00000540428 R3HCC1Q9Y3T6 440 aaKnown RBP12.87□□□□□ -0.35
CBX3P4-202ENST00000540428 TPRP12270 2363 aaKnown RBP12.87□□□□□ -0.35
CBX3P4-202ENST00000540428 GOLGA8IPA6NC78 632 aa12.86□□□□□ -0.35
CBX3P4-202ENST00000540428 GOLGA8JA6NMD2 632 aa12.86□□□□□ -0.35
CBX3P4-202ENST00000540428 TM4SF5O14894 197 aa12.86□□□□□ -0.35
CBX3P4-202ENST00000540428 STAT6P42226 847 aa12.86□□□□□ -0.35
CBX3P4-202ENST00000540428 NR1H3Q13133 447 aa12.86□□□□□ -0.35
CBX3P4-202ENST00000540428 KCNB1Q14721 858 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms