RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 OCMP0CE72 109 aaPredicted RBP9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 FGFR1P11362 822 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 ALAS1P13196 640 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 NPEPPSP55786 919 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 NONOQ15233 471 aaKnown RBP eCLIP9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 ZYXQ15942 572 aaKnown RBP9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 SEPT7Q16181 437 aaKnown RBP9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 SLFN13Q68D06 897 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 TTBK2Q6IQ55 1244 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 AADACL2Q6P093 401 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 CCDC62Q6P9F0 684 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 MOB2Q70IA6 237 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 H2AFVQ71UI9 128 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 IRF2BP2Q7Z5L9 587 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 TMCO5AQ8N6Q1 288 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 CLPTM1LQ96KA5 538 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 C7orf25Q9BPX7 421 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 MRPL46Q9H2W6 279 aaKnown RBP9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 VAT1LQ9HCJ6 419 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 TRNAU1APQ9NX07 287 aaKnown RBP9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 THEGQ9P2T0 379 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 TMX2Q9Y320 296 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 NEU2Q9Y3R4 380 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 CEPT1Q9Y6K0 416 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 ADAMTS3O15072 1205 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 MGEA5O60502 916 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 NDUFB10O96000 172 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 PLCG1P19174 1290 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 CPA2P48052 419 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 RPL26P61254 145 aaKnown RBP9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 FOLH1Q04609 750 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 CTTNQ14247 550 aaKnown RBP9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 CCDC137Q6PK04 289 aaKnown RBP9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 POTEHQ6S545 545 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 DTHD1Q6ZMT9 781 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 RNF111Q6ZNA4 994 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 DCDC5Q6ZRR9 648 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 SLC25A41Q8N5S1 370 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 KCTD17Q8N5Z5 321 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 DDHD1Q8NEL9 900 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 CCDC110Q8TBZ0 833 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 GPATCH1Q9BRR8 931 aaKnown RBP9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 OSBPL6Q9BZF3 934 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 CCSER1Q9C0I3 900 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 LIN28AQ9H9Z2 209 aaKnown RBP9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 OSGEPQ9NPF4 335 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 FBXO6Q9NRD1 293 aaPredicted RBP9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 RRN3Q9NYV6 651 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 PTPN22Q9Y2R2 807 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 TMA7Q9Y2S6 64 aaKnown RBP9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 ZMYM2Q9UBW7 1377 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 A0A0G2JND7 137 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 A0A1W2PQ67 120 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 TRAF5O00463 557 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 FKBP6O75344 327 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 PEX2P28328 305 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 PHBP35232 272 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 CHKAP35790 457 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 PHKA2P46019 1235 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 XIAPP98170 497 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 ZNF543Q08ER8 600 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 FOXD4Q12950 439 aaPredicted RBP9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 KRT81Q14533 505 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 TMED2Q15363 201 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 ARL13BQ3SXY8 428 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 C1orf146Q5VVC0 180 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 PAOXQ6QHF9 649 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 CAPN12Q6ZSI9 719 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 CYFIP1Q7L576 1253 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 ALG3Q92685 438 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 OSBPL8Q9BZF1 889 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 GANQ9H2C0 597 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 ARHGEF4Q9NR80 690 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 PLK2Q9NYY3 685 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 ANKFY1Q9P2R3 1169 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 CNTNAP5Q8WYK1 1306 aa9.92□□□□□ -0.82
CTNNA1-243ENST00000540387 B2RBV5 119 aa9.91□□□□□ -0.82
CTNNA1-243ENST00000540387 FAM47E-STBD1D6RA91 191 aa9.91□□□□□ -0.82
CTNNA1-243ENST00000540387 SLC16A2P36021 539 aa9.91□□□□□ -0.82
CTNNA1-243ENST00000540387 ZBTB16Q05516 673 aa9.91□□□□□ -0.82
CTNNA1-243ENST00000540387 CD300CQ08708 224 aa9.91□□□□□ -0.82
CTNNA1-243ENST00000540387 OVGP1Q12889 678 aa9.91□□□□□ -0.82
CTNNA1-243ENST00000540387 CALCOCO2Q13137 446 aa9.91□□□□□ -0.82
CTNNA1-243ENST00000540387 TLR1Q15399 786 aa9.91□□□□□ -0.82
CTNNA1-243ENST00000540387 VASH1Q7L8A9 365 aaPredicted RBP9.91□□□□□ -0.82
CTNNA1-243ENST00000540387 TMC7Q7Z402 723 aa9.91□□□□□ -0.82
CTNNA1-243ENST00000540387 PRUNE1Q86TP1 453 aa9.91□□□□□ -0.82
CTNNA1-243ENST00000540387 ULK2Q8IYT8 1036 aa9.91□□□□□ -0.82
CTNNA1-243ENST00000540387 ZDHHC14Q8IZN3 488 aa9.91□□□□□ -0.82
CTNNA1-243ENST00000540387 FBXO27Q8NI29 283 aa9.91□□□□□ -0.82
CTNNA1-243ENST00000540387 GDPD5Q8WTR4 605 aa9.91□□□□□ -0.82
CTNNA1-243ENST00000540387 ZNF75CPQ92670 426 aaPredicted RBP9.91□□□□□ -0.82
CTNNA1-243ENST00000540387 SKA1Q96BD8 255 aa9.91□□□□□ -0.82
CTNNA1-243ENST00000540387 BIRC8Q96P09 236 aa9.91□□□□□ -0.82
CTNNA1-243ENST00000540387 NUP85Q9BW27 656 aa9.91□□□□□ -0.82
CTNNA1-243ENST00000540387 S100A14Q9HCY8 104 aa9.91□□□□□ -0.82
CTNNA1-243ENST00000540387 TBC1D23Q9NUY8 699 aa9.91□□□□□ -0.82
CTNNA1-243ENST00000540387 SLC38A7Q9NVC3 462 aa9.91□□□□□ -0.82
CTNNA1-243ENST00000540387 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.91□□□□□ -0.822e-7■■■■■ 27.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms