RNA–Protein interactions for RNA: ENST00000540266.5

SSPN-207, Transcript of sarcospan, humanhuman

TSL 4 BASIC

Gene SSPN, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-207ENST00000540266 RPL6Q02878 288 aaKnown RBP11.25□□□□□ -0.61
SSPN-207ENST00000540266 BFSP1Q12934 665 aa11.25□□□□□ -0.61
SSPN-207ENST00000540266 TSGA10IPQ3SY00 556 aa11.25□□□□□ -0.61
SSPN-207ENST00000540266 TXNDC8Q6A555 127 aa11.25□□□□□ -0.61
SSPN-207ENST00000540266 GPR155Q7Z3F1 870 aa11.25□□□□□ -0.61
SSPN-207ENST00000540266 TTC30AQ86WT1 665 aa11.25□□□□□ -0.61
SSPN-207ENST00000540266 SFTPA1Q8IWL2 248 aa11.25□□□□□ -0.61
SSPN-207ENST00000540266 ALLCQ8N6M5 410 aa11.25□□□□□ -0.61
SSPN-207ENST00000540266 TXNDC5Q8NBS9 432 aaKnown RBP11.25□□□□□ -0.61
SSPN-207ENST00000540266 ATP2A3Q93084 1043 aa11.25□□□□□ -0.61
SSPN-207ENST00000540266 WBP1Q96G27 269 aa11.25□□□□□ -0.61
SSPN-207ENST00000540266 KIF2CQ99661 725 aa11.25□□□□□ -0.61
SSPN-207ENST00000540266 LINC00597Q9H2U6 94 aa11.25□□□□□ -0.61
SSPN-207ENST00000540266 TNFSF13BQ9Y275 285 aa11.25□□□□□ -0.61
SSPN-207ENST00000540266 KIF26AQ9ULI4 1882 aaPredicted RBP11.25□□□□□ -0.61
SSPN-207ENST00000540266 B8ZZF3 427 aa11.24□□□□□ -0.61
SSPN-207ENST00000540266 PYCARD-AS1I3L0S3 204 aa11.24□□□□□ -0.61
SSPN-207ENST00000540266 TLX3O43711 291 aaPredicted RBP11.24□□□□□ -0.61
SSPN-207ENST00000540266 USO1O60763 962 aaKnown RBP11.24□□□□□ -0.61
SSPN-207ENST00000540266 IFNAR1P17181 557 aa11.24□□□□□ -0.61
SSPN-207ENST00000540266 AKAP17AQ02040 695 aaKnown RBP11.24□□□□□ -0.61
SSPN-207ENST00000540266 MESP2Q0VG99 397 aa11.24□□□□□ -0.61
SSPN-207ENST00000540266 MTF1Q14872 753 aa11.24□□□□□ -0.61
SSPN-207ENST00000540266 ZNF77Q15935 545 aa11.24□□□□□ -0.61
SSPN-207ENST00000540266 ADCK5Q3MIX3 580 aa11.24□□□□□ -0.61
SSPN-207ENST00000540266 HSF5Q4G112 596 aaPredicted RBP11.24□□□□□ -0.61
SSPN-207ENST00000540266 SLC36A4Q6YBV0 504 aa11.24□□□□□ -0.61
SSPN-207ENST00000540266 EFCAB13Q8IY85 973 aa11.24□□□□□ -0.61
SSPN-207ENST00000540266 TMEM130Q8N3G9 435 aa11.24□□□□□ -0.61
SSPN-207ENST00000540266 FAM181AQ8N9Y4 354 aa11.24□□□□□ -0.61
SSPN-207ENST00000540266 MCPH1Q8NEM0 835 aa11.24□□□□□ -0.61
SSPN-207ENST00000540266 HMGB4Q8WW32 186 aa11.24□□□□□ -0.61
SSPN-207ENST00000540266 ZNF419Q96HQ0 510 aaPredicted RBP11.24□□□□□ -0.61
SSPN-207ENST00000540266 SLC26A6Q9BXS9 759 aa11.24□□□□□ -0.61
SSPN-207ENST00000540266 ZDHHC5Q9C0B5 715 aa11.24□□□□□ -0.61
SSPN-207ENST00000540266 WNT6Q9Y6F9 365 aa11.24□□□□□ -0.61
SSPN-207ENST00000540266 SHROOM3Q8TF72 1996 aa11.23□□□□□ -0.61
SSPN-207ENST00000540266 ERVH48-1M5A8F1 160 aa11.23□□□□□ -0.61
SSPN-207ENST00000540266 ABLIM1O14639 778 aa11.23□□□□□ -0.61
SSPN-207ENST00000540266 KLF8O95600 359 aaPredicted RBP11.23□□□□□ -0.61
SSPN-207ENST00000540266 NTRK1P04629 796 aa11.23□□□□□ -0.61
SSPN-207ENST00000540266 ZNF883P0CG24 379 aa11.23□□□□□ -0.61
SSPN-207ENST00000540266 GCFC2P16383 781 aaKnown RBP11.23□□□□□ -0.61
SSPN-207ENST00000540266 LIG1P18858 919 aa11.23□□□□□ -0.61
SSPN-207ENST00000540266 NAMPTP43490 491 aa11.23□□□□□ -0.61
SSPN-207ENST00000540266 KIR2DL1P43626 348 aaPredicted RBP11.23□□□□□ -0.61
SSPN-207ENST00000540266 EFNA5P52803 228 aa11.23□□□□□ -0.61
SSPN-207ENST00000540266 OSTNP61366 133 aa11.23□□□□□ -0.61
SSPN-207ENST00000540266 NR1H3Q13133 447 aa11.23□□□□□ -0.61
SSPN-207ENST00000540266 AAMPQ13685 434 aa11.23□□□□□ -0.61
SSPN-207ENST00000540266 PLEKHG6Q3KR16 790 aa11.23□□□□□ -0.61
SSPN-207ENST00000540266 EMC10Q5UCC4 262 aa11.23□□□□□ -0.61
SSPN-207ENST00000540266 GALNT17Q6IS24 598 aa11.23□□□□□ -0.61
SSPN-207ENST00000540266 APBB1IPQ7Z5R6 666 aaPredicted RBP11.23□□□□□ -0.61
SSPN-207ENST00000540266 TMC2Q8TDI7 906 aa11.23□□□□□ -0.61
SSPN-207ENST00000540266 ACAP3Q96P50 834 aa11.23□□□□□ -0.61
SSPN-207ENST00000540266 GCNAQ96QF7 691 aa11.23□□□□□ -0.61
SSPN-207ENST00000540266 CCDC94Q9BW85 323 aaPredicted RBP11.23□□□□□ -0.61
SSPN-207ENST00000540266 CDT1Q9H211 546 aa11.23□□□□□ -0.61
SSPN-207ENST00000540266 PDCL3Q9H2J4 239 aa11.23□□□□□ -0.61
SSPN-207ENST00000540266 FAM124BQ9H5Z6 455 aaPredicted RBP11.23□□□□□ -0.61
SSPN-207ENST00000540266 TNRC6BQ9UPQ9 1833 aaKnown RBP11.23□□□□□ -0.61
SSPN-207ENST00000540266 NUP210Q8TEM1 1887 aaPredicted RBP11.23□□□□□ -0.61
SSPN-207ENST00000540266 PI4KAP42356 2102 aa11.23□□□□□ -0.61
SSPN-207ENST00000540266 HLA-EP13747 358 aa11.22□□□□□ -0.61
SSPN-207ENST00000540266 TYMPP19971 482 aa11.22□□□□□ -0.61
SSPN-207ENST00000540266 ATP2B1P20020 1258 aa11.22□□□□□ -0.61
SSPN-207ENST00000540266 PTMSP20962 102 aa11.22□□□□□ -0.61
SSPN-207ENST00000540266 PROZP22891 400 aa11.22□□□□□ -0.61
SSPN-207ENST00000540266 LRPAP1P30533 357 aa11.22□□□□□ -0.61
SSPN-207ENST00000540266 HSPA4P34932 840 aa11.22□□□□□ -0.61
SSPN-207ENST00000540266 FAM160A1Q05DH4 1040 aa11.22□□□□□ -0.61
SSPN-207ENST00000540266 GRIK2Q13002 908 aa11.22□□□□□ -0.61
SSPN-207ENST00000540266 VEPH1Q14D04 833 aa11.22□□□□□ -0.61
SSPN-207ENST00000540266 ZBTB6Q15916 424 aa11.22□□□□□ -0.61
SSPN-207ENST00000540266 PTPRNQ16849 979 aa11.22□□□□□ -0.61
SSPN-207ENST00000540266 SLC10A6Q3KNW5 377 aa11.22□□□□□ -0.61
SSPN-207ENST00000540266 OVOS1Q6IE37 1185 aa11.22□□□□□ -0.61
SSPN-207ENST00000540266 NEK8Q86SG6 692 aa11.22□□□□□ -0.61
SSPN-207ENST00000540266 USP37Q86T82 979 aa11.22□□□□□ -0.61
SSPN-207ENST00000540266 POTEDQ86YR6 584 aa11.22□□□□□ -0.61
SSPN-207ENST00000540266 SLFN12Q8IYM2 578 aa11.22□□□□□ -0.61
SSPN-207ENST00000540266 FAM177A1Q8N128 213 aaPredicted RBP11.22□□□□□ -0.61
SSPN-207ENST00000540266 TRIML1Q8N9V2 468 aa11.22□□□□□ -0.61
SSPN-207ENST00000540266 OR10T2Q8NGX3 314 aa11.22□□□□□ -0.61
SSPN-207ENST00000540266 DEPTORQ8TB45 409 aa11.22□□□□□ -0.61
SSPN-207ENST00000540266 GIPC2Q8TF65 315 aa11.22□□□□□ -0.61
SSPN-207ENST00000540266 SETD7Q8WTS6 366 aaKnown RBP11.22□□□□□ -0.61
SSPN-207ENST00000540266 PNMA5Q96PV4 448 aa11.22□□□□□ -0.61
SSPN-207ENST00000540266 NACC1Q96RE7 527 aa11.22□□□□□ -0.61
SSPN-207ENST00000540266 SLC22A12Q96S37 553 aa11.22□□□□□ -0.61
SSPN-207ENST00000540266 CYP2S1Q96SQ9 504 aa11.22□□□□□ -0.61
SSPN-207ENST00000540266 SEPT5Q99719 369 aaPredicted RBP11.22□□□□□ -0.61
SSPN-207ENST00000540266 CDC6Q99741 560 aa11.22□□□□□ -0.61
SSPN-207ENST00000540266 ACO2Q99798 780 aaKnown RBP11.22□□□□□ -0.61
SSPN-207ENST00000540266 KIFC3Q9BVG8 833 aa11.22□□□□□ -0.61
SSPN-207ENST00000540266 SEMA4CQ9C0C4 833 aa11.22□□□□□ -0.61
SSPN-207ENST00000540266 IL21RQ9HBE5 538 aa11.22□□□□□ -0.61
SSPN-207ENST00000540266 GDPD2Q9HCC8 539 aa11.22□□□□□ -0.61
SSPN-207ENST00000540266 BCCIPQ9P287 314 aaKnown RBP eCLIP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms