RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 CDR1P51861 262 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 NDST1P52848 882 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 GCNT1Q02742 428 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 LRMPQ12912 555 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 DUSP4Q13115 394 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 ORC1Q13415 861 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 CUL2Q13617 745 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 SMAD2Q15796 467 aaKnown RBP7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 NFE2Q16621 373 aaPredicted RBP7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 EXOC3L4Q17RC7 722 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 AAK1Q2M2I8 961 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 UVSSAQ2YD98 709 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 CFAP221Q4G0U5 840 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 VWA3BQ502W6 1294 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 MDH1BQ5I0G3 518 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 PPM1LQ5SGD2 360 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 PTCRAQ6ISU1 281 aaPredicted RBP7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 LRSAM1Q6UWE0 723 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 TMC5Q6UXY8 1006 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 GBP6Q6ZN66 633 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 APTXQ7Z2E3 356 aaKnown RBP7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 GPR149Q86SP6 731 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 UNC93AQ86WB7 457 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 ARHGEF19Q8IW93 802 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 PPM1KQ8N3J5 372 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 ATAD1Q8NBU5 361 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 B3GALNT2Q8NCR0 500 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 EHBP1Q8NDI1 1231 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 OR6B3Q8NGW1 331 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 MYCBPAPQ8TBZ2 947 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 SPPL2BQ8TCT7 592 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 WHAMMQ8TF30 809 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 ATXN2LQ8WWM7 1075 aaKnown RBP7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 SUSD6Q92537 303 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 MYLPFQ96A32 169 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 PCED1BQ96HM7 432 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 FUBP3Q96I24 572 aaKnown RBP eCLIP7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 TNIP3Q96KP6 325 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 NT5C1BQ96P26 610 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 TWNKQ96RR1 684 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 LPIN3Q9BQK8 851 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 CRACR2AQ9BSW2 395 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 APOL5Q9BWW9 433 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 ADAM7Q9H2U9 754 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 CYP4F11Q9HBI6 524 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 CBX8Q9HC52 389 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 ABCB6Q9NP58 842 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 CISHQ9NSE2 258 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 ABI2Q9NYB9 513 aaPredicted RBP7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 LIMA1Q9UHB6 759 aaKnown RBP7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 GTF3C4Q9UKN8 822 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 USP15Q9Y4E8 981 aaPredicted RBP7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 PCDHB5Q9Y5E4 795 aa7.44□□□□□ -1.22
LPCAT3-209ENST00000540060 SMTNL1A8MU46 457 aa7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 CCL16O15467 120 aa7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 SOAT2O75908 522 aa7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 LRG1P02750 347 aa7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 HAPLN1P10915 354 aaPredicted RBP7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 IL9P15248 144 aa7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 PTPN1P18031 435 aaKnown RBP7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 SLC9A1P19634 815 aa7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 ACO1P21399 889 aaKnown RBP7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 PON1P27169 355 aa7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 ELF1P32519 619 aa7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 MAGEA11P43364 429 aa7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 COPB1P53618 953 aaKnown RBP7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 ZNF445P59923 1031 aa7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 MRPS5P82675 430 aaKnown RBP7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 APBA1Q02410 837 aa7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 TWF1Q12792 350 aa7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 PLD1Q13393 1074 aa7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 CBX2Q14781 532 aaPredicted RBP7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 MAPRE1Q15691 268 aaKnown RBP7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 PUS10Q3MIT2 529 aaKnown RBP7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 PHLDB3Q6NSJ2 640 aa7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 CES5AQ6NT32 575 aa7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 DPY19L2P1Q6NXN4 242 aa7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 CYP26C1Q6V0L0 522 aa7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 C4orf50Q6ZRC1 276 aa7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 ACOT1Q86TX2 421 aa7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 LUZP1Q86V48 1076 aa7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 SPATA2LQ8IUW3 424 aaPredicted RBP7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 CRYBG2Q8N1P7 616 aa7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 TTC39CQ8N584 583 aa7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 FAM200AQ8TCP9 573 aa7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 SMG7Q92540 1137 aaKnown RBP7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 KAT5Q92993 513 aa7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 RIPOR3Q96MK2 946 aa7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 KREMEN1Q96MU8 473 aa7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 ASB2Q96Q27 587 aa7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 SEPT5Q99719 369 aaPredicted RBP7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 PRKD2Q9BZL6 878 aa7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 ELOVL4Q9GZR5 314 aa7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 VPS16Q9H269 839 aa7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 POMKQ9H5K3 350 aa7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 SIX2Q9NPC8 291 aa7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 APEX2Q9UBZ4 518 aa7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 SLC27A5Q9Y2P5 690 aa7.43□□□□□ -1.22
LPCAT3-209ENST00000540060 CLUHO75153 1309 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms