RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 GCLCP48506 637 aaPredicted RBP10.48□□□□□ -0.73
TRAF1-202ENST00000540010 LAMC2Q13753 1193 aa10.48□□□□□ -0.73
TRAF1-202ENST00000540010 HSP90AA5PQ58FG0 334 aa10.48□□□□□ -0.73
TRAF1-202ENST00000540010 JADE1Q6IE81 842 aa10.48□□□□□ -0.73
TRAF1-202ENST00000540010 C1orf228Q6PIY5 440 aa10.48□□□□□ -0.73
TRAF1-202ENST00000540010 PDZD4Q76G19 769 aaPredicted RBP10.48□□□□□ -0.73
TRAF1-202ENST00000540010 TRMT10CQ7L0Y3 403 aaKnown RBP10.48□□□□□ -0.73
TRAF1-202ENST00000540010 CDR2LQ86X02 465 aaPredicted RBP10.48□□□□□ -0.73
TRAF1-202ENST00000540010 NACA2Q9H009 215 aa10.48□□□□□ -0.73
TRAF1-202ENST00000540010 ACP6Q9NPH0 428 aa10.48□□□□□ -0.73
TRAF1-202ENST00000540010 PDLIM7Q9NR12 457 aa10.48□□□□□ -0.73
TRAF1-202ENST00000540010 SLC5A4Q9NY91 659 aa10.48□□□□□ -0.73
TRAF1-202ENST00000540010 PCDHGC5Q9Y5F6 944 aa10.48□□□□□ -0.73
TRAF1-202ENST00000540010 HSPA4LO95757 839 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 CASP2P42575 452 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 OVGP1Q12889 678 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 ZNF699Q32M78 642 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 ZNF568Q3ZCX4 644 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 MEI1Q5TIA1 1274 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 SLC47A2Q86VL8 602 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 SHCBP1Q8NEM2 672 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 GRAMD1AQ96CP6 724 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 KLC2Q9H0B6 622 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 GAS2O43903 313 aaKnown RBP10.47□□□□□ -0.73
TRAF1-202ENST00000540010 SKAP2O75563 359 aaPredicted RBP10.47□□□□□ -0.73
TRAF1-202ENST00000540010 PGM1P36871 562 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 PLCB4Q15147 1175 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 KLHL38Q2WGJ6 581 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 DPY19L2P1Q6NXN4 242 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 LRGUKQ96M69 825 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 RPF1Q9H9Y2 349 aaKnown RBP10.47□□□□□ -0.73
TRAF1-202ENST00000540010 TAS2R14Q9NYV8 317 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 SRCAPQ6ZRS2 3230 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 ENO1P06733 434 aaKnown RBP10.47□□□□□ -0.73
TRAF1-202ENST00000540010 RALAP11233 206 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 TARSP26639 723 aaKnown RBP10.47□□□□□ -0.73
TRAF1-202ENST00000540010 COILP38432 576 aaPredicted RBP10.47□□□□□ -0.73
TRAF1-202ENST00000540010 MAGEA4P43358 317 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 CDH6P55285 790 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 SLC12A1Q13621 1099 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 C1orf220Q5T0J3 134 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 ENOSF1Q7L5Y1 443 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 TAS1R3Q7RTX0 852 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 SLC13A5Q86YT5 568 aaPredicted RBP10.47□□□□□ -0.73
TRAF1-202ENST00000540010 LMO3Q8TAP4 145 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 MORC4Q8TE76 937 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 AFG1LQ8WV93 481 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 hCG_2014768A0A024R1R8 64 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 GJB1P08034 283 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 SLC26A2P50443 739 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 GPC3P51654 580 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 BCAR1P56945 870 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 HUNKP57058 714 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 TFDP2Q14188 446 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 FAM47CQ5HY64 1035 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 PLPPR4Q7Z2D5 763 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 TTC13Q8NBP0 860 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 OR6B3Q8NGW1 331 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 CEP70Q8NHQ1 597 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.47□□□□□ -0.73
TRAF1-202ENST00000540010 UVRAGQ9P2Y5 699 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 EPS15L1Q9UBC2 864 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 IP6K2Q9UHH9 426 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 DDX20Q9UHI6 824 aaKnown RBP10.47□□□□□ -0.73
TRAF1-202ENST00000540010 L3MBTL1Q9Y468 752 aa10.47□□□□□ -0.73
TRAF1-202ENST00000540010 LMNAP02545 664 aaKnown RBP10.46□□□□□ -0.73
TRAF1-202ENST00000540010 SLC4A1P02730 911 aa10.46□□□□□ -0.73
TRAF1-202ENST00000540010 CALB1P05937 261 aa10.46□□□□□ -0.73
TRAF1-202ENST00000540010 APRTP07741 180 aa10.46□□□□□ -0.73
TRAF1-202ENST00000540010 ADCYAP1R1P41586 468 aa10.46□□□□□ -0.73
TRAF1-202ENST00000540010 TMED1Q13445 227 aa10.46□□□□□ -0.73
TRAF1-202ENST00000540010 SMTNL2Q2TAL5 461 aa10.46□□□□□ -0.73
TRAF1-202ENST00000540010 LRRC23Q53EV4 343 aaPredicted RBP10.46□□□□□ -0.73
TRAF1-202ENST00000540010 ST13P4Q8IZP2 240 aaPredicted RBP10.46□□□□□ -0.73
TRAF1-202ENST00000540010 RYBPQ8N488 228 aaPredicted RBP10.46□□□□□ -0.73
TRAF1-202ENST00000540010 TRIML2Q8N7C3 387 aa10.46□□□□□ -0.73
TRAF1-202ENST00000540010 AENQ8WTP8 325 aaKnown RBP10.46□□□□□ -0.73
TRAF1-202ENST00000540010 ZBTB10Q96DT7 871 aa10.46□□□□□ -0.73
TRAF1-202ENST00000540010 PPP1R36Q96LQ0 422 aa10.46□□□□□ -0.73
TRAF1-202ENST00000540010 KREMEN1Q96MU8 473 aa10.46□□□□□ -0.73
TRAF1-202ENST00000540010 TRIM56Q9BRZ2 755 aaKnown RBP10.46□□□□□ -0.73
TRAF1-202ENST00000540010 TMEM134Q9H6X4 195 aa10.46□□□□□ -0.73
TRAF1-202ENST00000540010 NUB1Q9Y5A7 615 aa10.46□□□□□ -0.73
TRAF1-202ENST00000540010 IGKV6D-21A0A0A0MT36 114 aa10.46□□□□□ -0.74
TRAF1-202ENST00000540010 STRNO43815 780 aa10.46□□□□□ -0.74
TRAF1-202ENST00000540010 SH3BP5O60239 455 aa10.46□□□□□ -0.74
TRAF1-202ENST00000540010 UBOX5O94941 541 aa10.46□□□□□ -0.74
TRAF1-202ENST00000540010 ANP32DO95626 131 aa10.46□□□□□ -0.74
TRAF1-202ENST00000540010 ZNF286BP0CG31 522 aa10.46□□□□□ -0.74
TRAF1-202ENST00000540010 CYP11B1P15538 503 aa10.46□□□□□ -0.74
TRAF1-202ENST00000540010 PHKA2P46019 1235 aa10.46□□□□□ -0.74
TRAF1-202ENST00000540010 ALDH18A1P54886 795 aaKnown RBP10.46□□□□□ -0.74
TRAF1-202ENST00000540010 FAM102AQ5T9C2 384 aaPredicted RBP10.46□□□□□ -0.74
TRAF1-202ENST00000540010 C3orf62Q6ZUJ4 267 aa10.46□□□□□ -0.74
TRAF1-202ENST00000540010 NOP9Q86U38 636 aaKnown RBP10.46□□□□□ -0.74
TRAF1-202ENST00000540010 BRI3BPQ8WY22 251 aa10.46□□□□□ -0.74
TRAF1-202ENST00000540010 LRRC4Q9HBW1 653 aa10.46□□□□□ -0.74
TRAF1-202ENST00000540010 INSRRP14616 1297 aa10.46□□□□□ -0.74
TRAF1-202ENST00000540010 WDR72Q3MJ13 1102 aa10.46□□□□□ -0.74
TRAF1-202ENST00000540010 ZBTB41Q5SVQ8 909 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms